Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2930 and HP15_2931 are separated by 48 nucleotides HP15_2931 and HP15_2932 are separated by 66 nucleotides
HP15_2930: HP15_2930 - long-chain fatty acid transport protein, at 3,069,865 to 3,071,118
_2930
HP15_2931: HP15_2931 - glycerate dehydrogenase, at 3,071,167 to 3,072,129
_2931
HP15_2932: HP15_2932 - thiopurine S-methyltransferase, at 3,072,196 to 3,072,849
_2932
Position (kb)
3071
3072
3073 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3070.293 kb on + strand, within HP15_2930 at 3070.301 kb on - strand, within HP15_2930 at 3070.347 kb on - strand, within HP15_2930 at 3070.426 kb on + strand, within HP15_2930 at 3070.426 kb on + strand, within HP15_2930 at 3070.431 kb on - strand, within HP15_2930 at 3070.456 kb on - strand, within HP15_2930 at 3070.494 kb on + strand, within HP15_2930 at 3070.549 kb on + strand, within HP15_2930 at 3070.549 kb on + strand, within HP15_2930 at 3070.612 kb on + strand, within HP15_2930 at 3070.631 kb on + strand, within HP15_2930 at 3070.651 kb on + strand, within HP15_2930 at 3070.677 kb on + strand, within HP15_2930 at 3070.727 kb on - strand, within HP15_2930 at 3070.736 kb on + strand, within HP15_2930 at 3070.789 kb on + strand, within HP15_2930 at 3070.797 kb on - strand, within HP15_2930 at 3070.797 kb on - strand, within HP15_2930 at 3070.822 kb on - strand, within HP15_2930 at 3070.889 kb on - strand, within HP15_2930 at 3070.914 kb on - strand, within HP15_2930 at 3070.927 kb on - strand, within HP15_2930 at 3070.945 kb on + strand, within HP15_2930 at 3070.990 kb on - strand, within HP15_2930 at 3070.990 kb on - strand, within HP15_2930 at 3070.990 kb on - strand, within HP15_2930 at 3071.033 kb on + strand at 3071.047 kb on + strand at 3071.122 kb on + strand at 3071.122 kb on + strand at 3071.141 kb on + strand at 3071.141 kb on + strand at 3071.149 kb on - strand at 3071.158 kb on + strand at 3071.159 kb on - strand at 3071.225 kb on + strand at 3071.228 kb on - strand at 3071.230 kb on + strand at 3071.230 kb on + strand at 3071.285 kb on + strand, within HP15_2931 at 3071.380 kb on + strand, within HP15_2931 at 3071.401 kb on + strand, within HP15_2931 at 3071.621 kb on - strand, within HP15_2931 at 3071.773 kb on + strand, within HP15_2931 at 3071.928 kb on + strand, within HP15_2931 at 3071.936 kb on - strand, within HP15_2931 at 3071.971 kb on - strand, within HP15_2931 at 3072.081 kb on - strand at 3072.131 kb on + strand at 3072.131 kb on + strand at 3072.134 kb on - strand at 3072.144 kb on - strand at 3072.144 kb on - strand at 3072.194 kb on - strand at 3072.340 kb on + strand, within HP15_2932 at 3072.386 kb on + strand, within HP15_2932 at 3072.386 kb on + strand, within HP15_2932 at 3072.386 kb on + strand, within HP15_2932 at 3072.394 kb on - strand, within HP15_2932 at 3072.394 kb on - strand, within HP15_2932 at 3072.394 kb on - strand, within HP15_2932 at 3072.498 kb on - strand, within HP15_2932 at 3072.534 kb on + strand, within HP15_2932 at 3072.561 kb on - strand, within HP15_2932 at 3072.576 kb on - strand, within HP15_2932 at 3072.659 kb on + strand, within HP15_2932 at 3072.686 kb on - strand, within HP15_2932 at 3072.686 kb on - strand, within HP15_2932 at 3072.771 kb on + strand, within HP15_2932 at 3072.779 kb on - strand, within HP15_2932 at 3072.795 kb on + strand at 3072.843 kb on + strand at 3072.843 kb on + strand at 3072.899 kb on + strand at 3072.987 kb on + strand at 3072.987 kb on - strand at 3073.059 kb on + strand at 3073.059 kb on + strand at 3073.059 kb on + strand at 3073.059 kb on + strand at 3073.075 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 3,070,293 + HP15_2930 0.34 +1.6 3,070,301 - HP15_2930 0.35 -1.7 3,070,347 - HP15_2930 0.38 +0.1 3,070,426 + HP15_2930 0.45 +0.8 3,070,426 + HP15_2930 0.45 -0.3 3,070,431 - HP15_2930 0.45 +0.9 3,070,456 - HP15_2930 0.47 +1.2 3,070,494 + HP15_2930 0.50 -0.2 3,070,549 + HP15_2930 0.55 -0.4 3,070,549 + HP15_2930 0.55 -0.5 3,070,612 + HP15_2930 0.60 -0.3 3,070,631 + HP15_2930 0.61 -0.6 3,070,651 + HP15_2930 0.63 +0.3 3,070,677 + HP15_2930 0.65 +0.3 3,070,727 - HP15_2930 0.69 -1.3 3,070,736 + HP15_2930 0.69 +2.5 3,070,789 + HP15_2930 0.74 -3.4 3,070,797 - HP15_2930 0.74 -2.1 3,070,797 - HP15_2930 0.74 -0.7 3,070,822 - HP15_2930 0.76 +0.1 3,070,889 - HP15_2930 0.82 +1.1 3,070,914 - HP15_2930 0.84 +0.1 3,070,927 - HP15_2930 0.85 -0.0 3,070,945 + HP15_2930 0.86 +0.3 3,070,990 - HP15_2930 0.90 -0.4 3,070,990 - HP15_2930 0.90 +0.3 3,070,990 - HP15_2930 0.90 +0.1 3,071,033 + -1.2 3,071,047 + +0.5 3,071,122 + -0.2 3,071,122 + -0.9 3,071,141 + -0.3 3,071,141 + -0.2 3,071,149 - +0.2 3,071,158 + -0.6 3,071,159 - +0.6 3,071,225 + -1.4 3,071,228 - -3.0 3,071,230 + +0.5 3,071,230 + -0.1 3,071,285 + HP15_2931 0.12 +0.1 3,071,380 + HP15_2931 0.22 +0.2 3,071,401 + HP15_2931 0.24 -0.0 3,071,621 - HP15_2931 0.47 -1.0 3,071,773 + HP15_2931 0.63 +0.8 3,071,928 + HP15_2931 0.79 -1.9 3,071,936 - HP15_2931 0.80 -0.3 3,071,971 - HP15_2931 0.83 +0.6 3,072,081 - -0.3 3,072,131 + -0.4 3,072,131 + +0.9 3,072,134 - +0.6 3,072,144 - -1.1 3,072,144 - -0.7 3,072,194 - -0.2 3,072,340 + HP15_2932 0.22 -0.2 3,072,386 + HP15_2932 0.29 -0.0 3,072,386 + HP15_2932 0.29 -0.1 3,072,386 + HP15_2932 0.29 +0.2 3,072,394 - HP15_2932 0.30 +2.3 3,072,394 - HP15_2932 0.30 +0.2 3,072,394 - HP15_2932 0.30 -0.3 3,072,498 - HP15_2932 0.46 -0.1 3,072,534 + HP15_2932 0.52 -0.9 3,072,561 - HP15_2932 0.56 -0.4 3,072,576 - HP15_2932 0.58 +0.6 3,072,659 + HP15_2932 0.71 +0.7 3,072,686 - HP15_2932 0.75 -0.1 3,072,686 - HP15_2932 0.75 -0.3 3,072,771 + HP15_2932 0.88 -1.1 3,072,779 - HP15_2932 0.89 -0.1 3,072,795 + +0.2 3,072,843 + -0.4 3,072,843 + -0.1 3,072,899 + -0.5 3,072,987 + +0.9 3,072,987 - -0.3 3,073,059 + -0.7 3,073,059 + +0.2 3,073,059 + +0.1 3,073,059 + +0.2 3,073,075 - +1.0
Or see this region's nucleotide sequence