Strain Fitness in Marinobacter adhaerens HP15 around HP15_2457

Experiment: m.b. Cisplatin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2455 and HP15_2456 are separated by 369 nucleotidesHP15_2456 and HP15_2457 are separated by 11 nucleotidesHP15_2457 and HP15_2458 are separated by 35 nucleotides HP15_2455: HP15_2455 - rod shaping protein MreB, at 2,593,756 to 2,594,799 _2455 HP15_2456: HP15_2456 - aspartyl/glutamyl-tRNA amidotransferase subunit C, at 2,595,169 to 2,595,456 _2456 HP15_2457: HP15_2457 - glutamyl-tRNA (Gln) amidotransferase A subunit, at 2,595,468 to 2,596,925 _2457 HP15_2458: HP15_2458 - aspartyl/glutamyl-tRNA amidotransferase subunit B, at 2,596,961 to 2,598,412 _2458 Position (kb) 2595 2596 2597Strain fitness (log2 ratio) -1 0 1at 2594.890 kb on + strandat 2594.898 kb on - strandat 2594.911 kb on + strandat 2594.983 kb on + strandat 2594.995 kb on + strandat 2596.926 kb on + strandat 2596.941 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml
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2,594,890 + +1.3
2,594,898 - -0.5
2,594,911 + +0.3
2,594,983 + +0.4
2,594,995 + +0.4
2,596,926 + +0.1
2,596,941 + -1.0

Or see this region's nucleotide sequence