Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c22200

Experiment: m.b. Fusidic 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.0002 mg/ml
2,302,903	-				+0.6
2,302,908	-				+0.3
2,302,926	-				-0.4
2,302,942	+				+0.2
2,302,955	-				-0.2
2,302,958	-				-0.2
2,303,060	+				-0.3
2,303,137	+				-2.0
2,303,194	+				-0.2
2,303,202	-				+0.5
2,303,214	+				+1.0
2,303,262	+				-2.0
2,303,270	-				-1.5
2,303,280	-				-0.2
2,303,280	-				-1.0
2,303,386	+				-1.5
2,303,386	+				+0.2
2,303,386	+				+0.2
2,303,386	+				-3.1
2,303,394	-				-2.7
2,303,394	-				-1.4
2,303,394	-				+2.3
2,303,396	+				+1.6
2,303,445	+				+0.3
2,303,455	+				-0.7
2,303,541	+				+0.3
2,303,608	+				-2.5
2,303,621	-				-0.1
2,303,635	+				-0.3
2,303,643	-				+0.6
2,303,650	+				+0.2
2,303,650	+				+0.5
2,303,690	+		PGA1_c22200	0.11	+0.7
2,303,690	+		PGA1_c22200	0.11	-0.4
2,303,690	+		PGA1_c22200	0.11	-1.7
2,303,690	+		PGA1_c22200	0.11	-0.4
2,303,690	+		PGA1_c22200	0.11	+1.3
2,303,690	+		PGA1_c22200	0.11	-2.2
2,303,690	+		PGA1_c22200	0.11	-2.6
2,303,698	-		PGA1_c22200	0.12	+0.1
2,303,698	-		PGA1_c22200	0.12	+1.0
2,303,698	-		PGA1_c22200	0.12	-0.8
2,303,698	-		PGA1_c22200	0.12	+0.9
2,303,698	-		PGA1_c22200	0.12	-0.5
2,303,763	+		PGA1_c22200	0.21	+1.8
2,303,777	-		PGA1_c22200	0.23	+1.2
2,303,808	+		PGA1_c22200	0.28	+0.5
2,303,835	-		PGA1_c22200	0.32	+1.8
2,303,842	+		PGA1_c22200	0.33	-0.2
2,303,842	+		PGA1_c22200	0.33	+0.8
2,303,850	-		PGA1_c22200	0.34	-0.4
2,303,879	+		PGA1_c22200	0.38	+0.0
2,303,887	-		PGA1_c22200	0.39	-0.2
2,303,887	-		PGA1_c22200	0.39	-0.9
2,303,916	+		PGA1_c22200	0.43	-1.8
2,303,924	-		PGA1_c22200	0.44	+0.4
2,303,998	-		PGA1_c22200	0.55	+1.2
2,304,019	+		PGA1_c22200	0.58	-1.8
2,304,024	+		PGA1_c22200	0.59	-0.9
2,304,027	-		PGA1_c22200	0.59	-1.9
2,304,027	-		PGA1_c22200	0.59	-1.1
2,304,027	-		PGA1_c22200	0.59	+0.7
2,304,027	-		PGA1_c22200	0.59	-0.1
2,304,029	+		PGA1_c22200	0.60	+0.2
2,304,029	+		PGA1_c22200	0.60	+0.2
2,304,029	+		PGA1_c22200	0.60	-1.1
2,304,032	-		PGA1_c22200	0.60	-0.1
2,304,032	-		PGA1_c22200	0.60	+1.8
2,304,037	-		PGA1_c22200	0.61	-0.3
2,304,037	-		PGA1_c22200	0.61	-0.7
2,304,046	+		PGA1_c22200	0.62	+1.4
2,304,054	-		PGA1_c22200	0.63	-0.7
2,304,063	+		PGA1_c22200	0.65	+0.4
2,304,071	+		PGA1_c22200	0.66	-1.8
2,304,081	+		PGA1_c22200	0.67	-0.5
2,304,081	+		PGA1_c22200	0.67	-2.7
2,304,138	-		PGA1_c22200	0.75	-2.0
2,304,155	+		PGA1_c22200	0.78	-2.0
2,304,211	-		PGA1_c22200	0.86	-1.4
2,304,219	-		PGA1_c22200	0.87	-1.5
2,304,225	-		PGA1_c22200	0.88	-0.3
2,304,234	+		PGA1_c22200	0.89	-2.8
2,304,249	+				-0.1
2,304,271	+				+0.4
2,304,271	+				+1.8
2,304,271	+				+0.6
2,304,271	+				-1.0
2,304,271	+				-1.0
2,304,271	+				-0.4
2,304,279	-				+1.2
2,304,279	-				-0.2
2,304,281	+				+0.7
2,304,323	-				+2.6
2,304,325	+				-2.4
2,304,362	+				+0.1
2,304,384	-				-0.5
2,304,502	+				+0.3
2,304,544	+				+2.8
2,304,544	+				-0.0
2,304,544	+				+0.2
2,304,544	+				-0.2
2,304,549	+				+3.0
2,304,552	-				+0.4
2,304,552	-				-0.4
2,304,558	+				-2.3
2,304,558	+				-0.0
2,304,566	-				+1.8
2,304,585	-				+1.2
2,304,596	+				-0.1
2,304,666	-				-0.2
2,304,703	+				-0.7
2,304,703	+				+0.9
2,304,705	-				-0.4
2,304,708	+				-0.5
2,304,718	-				+1.2
2,304,720	+				+1.1
2,304,720	+				+3.0
2,304,720	+				-0.8
2,304,723	-				-0.5
2,304,723	-				-0.3
2,304,728	-				-1.4
2,304,768	-				+0.7
2,304,770	-				-1.4
2,304,777	-				-2.2
2,304,840	+				-1.0
2,304,848	-				+0.4
2,304,850	-				-0.7
2,304,868	+				-1.7
2,304,900	+				-0.4
2,304,900	+				-0.3
2,304,900	+				-0.0
2,304,900	+				+1.0
2,304,908	-				-0.2
2,304,908	-				+0.8
2,304,908	-				+1.1
2,304,908	-				+1.8
2,304,909	-				+1.1
2,304,933	+				-1.1
2,304,933	+				+1.0
2,304,933	+				+0.9
2,304,948	-				+0.8
2,305,002	+				+1.8
2,305,002	+				-0.2
2,305,002	+				+0.3
2,305,010	+				+1.8
2,305,010	-				+1.1
2,305,010	-				-1.7
2,305,010	-				-1.0
2,305,010	-				-2.6
2,305,010	-				-0.4
2,305,010	-				+1.2
2,305,018	+				-1.2
2,305,028	+				+1.5
2,305,034	-				-0.2
2,305,036	-				+0.5
2,305,038	-				-1.2
2,305,047	+				+0.6
2,305,047	+				-2.0
2,305,047	+				-1.4
2,305,047	+				-0.3
2,305,047	+				-0.5
2,305,047	+				-1.4
2,305,047	+				-1.7
2,305,047	+				+0.6
2,305,047	+				+1.8
2,305,047	+				-0.2
2,305,055	-				-1.0
2,305,055	-				-0.5
2,305,055	-				+1.2
2,305,055	-				+0.9
2,305,055	-				-1.0
2,305,055	-				-1.5
2,305,055	-				-1.2
2,305,055	-				+0.1
2,305,055	-				+1.2
2,305,055	-				+0.7
2,305,057	+				-0.3
2,305,057	+				+0.8
2,305,057	+				-0.1
2,305,057	+				+0.1
2,305,057	+				-0.9
2,305,057	+				-0.3
2,305,057	+				+1.1
2,305,057	+				-2.5
2,305,057	+				+1.0
2,305,057	+				-0.2
2,305,057	+				-1.4
2,305,065	-				+0.9
2,305,065	-				+1.2
2,305,065	-				+0.6
2,305,065	-				+0.3
2,305,065	-				-1.5
2,305,065	-				+0.6
2,305,065	-				+0.3
2,305,065	-				+0.8
2,305,065	-				-0.7
2,305,065	-				+0.6
2,305,065	-				+1.2
2,305,065	-				+0.8
2,305,065	-				-0.5
2,305,065	-				+1.2
2,305,065	-				-0.7
2,305,065	-				+1.4
2,305,076	+				-1.5
2,305,076	+				+0.3
2,305,077	+				-0.5
2,305,077	+				+1.5
2,305,082	+				-1.9
2,305,082	+				+1.6
2,305,085	-				-1.1
2,305,087	+				+0.8
2,305,095	-				+0.3
2,305,098	+				-1.2
2,305,103	+				+0.6
2,305,103	+				+2.3
2,305,103	+				-0.1
2,305,103	+				+0.1
2,305,103	+				-0.3
2,305,103	+				+2.2
2,305,103	+				+1.5
2,305,103	+				-0.2
2,305,103	+				-0.8
2,305,103	+				-0.1
2,305,103	+				+0.9
2,305,103	+				-0.8
2,305,103	+				-0.1
2,305,103	+				+0.7
2,305,103	+				+1.8
2,305,103	+				+0.3
2,305,103	+				+0.4
2,305,103	+				-0.4
2,305,105	-				+0.8
2,305,106	-				-0.4
2,305,106	-				-1.7
2,305,111	-				+1.8
2,305,111	-				-0.2
2,305,111	-				-0.3
2,305,111	-				-1.0
2,305,111	-				-0.0
2,305,111	-				-0.1
2,305,111	-				-0.7
2,305,111	-				+1.5
2,305,111	-				-1.0
2,305,111	-				-0.4
2,305,111	-				-1.3
2,305,111	-				+0.1
2,305,111	-				-0.3
2,305,111	-				-0.5
2,305,111	-				-1.5
2,305,111	-				-0.5
2,305,111	-				-0.5
2,305,111	-				-2.3
2,305,204	+		PGA1_c22210	0.15	-1.5
2,305,204	+		PGA1_c22210	0.15	+1.6
2,305,204	+		PGA1_c22210	0.15	+0.6
2,305,204	+		PGA1_c22210	0.15	-1.4
2,305,212	-		PGA1_c22210	0.18	+0.6
2,305,214	+		PGA1_c22210	0.18	-0.1
2,305,214	+		PGA1_c22210	0.18	+0.1
2,305,214	+		PGA1_c22210	0.18	+1.1
2,305,214	-		PGA1_c22210	0.18	+1.2
2,305,214	-		PGA1_c22210	0.18	+1.2
2,305,214	-		PGA1_c22210	0.18	-0.2
2,305,222	-		PGA1_c22210	0.21	-0.8
2,305,222	-		PGA1_c22210	0.21	+0.1
2,305,225	+		PGA1_c22210	0.22	-1.2
2,305,229	-		PGA1_c22210	0.23	-0.7
2,305,230	+		PGA1_c22210	0.24	-0.2
2,305,230	+		PGA1_c22210	0.24	+0.5
2,305,233	-		PGA1_c22210	0.25	-0.8
2,305,233	-		PGA1_c22210	0.25	-0.4
2,305,238	-		PGA1_c22210	0.26	-0.7
2,305,238	-		PGA1_c22210	0.26	+1.6
2,305,246	+		PGA1_c22210	0.29	+0.1
2,305,254	-		PGA1_c22210	0.32	-0.8
2,305,256	+		PGA1_c22210	0.33	-3.0
2,305,277	+		PGA1_c22210	0.40	+0.1
2,305,277	+		PGA1_c22210	0.40	-1.1
2,305,285	-		PGA1_c22210	0.43	-1.1
2,305,285	-		PGA1_c22210	0.43	-0.3
2,305,285	-		PGA1_c22210	0.43	-0.2