Experiment: m.b. Fusidic 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt
PGA1_c02230: PGA1_c02230 - hypothetical protein, at 202,473 to 202,652
_c02230
Position (kb)
202
203 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 201.494 kb on + strand at 201.502 kb on - strand at 201.525 kb on + strand at 201.533 kb on - strand at 201.533 kb on - strand at 201.543 kb on - strand at 201.551 kb on - strand at 201.577 kb on - strand at 201.698 kb on + strand at 201.698 kb on + strand at 201.704 kb on + strand at 201.722 kb on - strand at 201.723 kb on + strand at 201.908 kb on - strand at 201.929 kb on + strand at 201.929 kb on + strand at 201.937 kb on - strand at 201.937 kb on - strand at 201.965 kb on + strand at 201.999 kb on - strand at 202.057 kb on - strand at 202.083 kb on - strand at 202.246 kb on - strand at 202.297 kb on - strand at 202.297 kb on - strand at 202.350 kb on - strand at 202.362 kb on + strand at 202.370 kb on - strand at 202.377 kb on + strand at 202.394 kb on + strand at 202.413 kb on - strand at 202.471 kb on + strand at 202.481 kb on - strand at 202.483 kb on + strand at 202.486 kb on - strand at 202.494 kb on - strand, within PGA1_c02230 at 202.494 kb on - strand, within PGA1_c02230 at 202.513 kb on - strand, within PGA1_c02230 at 202.528 kb on + strand, within PGA1_c02230 at 202.528 kb on + strand, within PGA1_c02230 at 202.536 kb on - strand, within PGA1_c02230 at 202.536 kb on - strand, within PGA1_c02230 at 202.536 kb on - strand, within PGA1_c02230 at 202.549 kb on - strand, within PGA1_c02230 at 202.565 kb on - strand, within PGA1_c02230 at 202.595 kb on + strand, within PGA1_c02230 at 202.638 kb on - strand at 202.643 kb on - strand at 202.716 kb on - strand at 202.730 kb on + strand at 202.731 kb on + strand at 202.748 kb on + strand at 202.756 kb on - strand at 202.758 kb on + strand at 202.759 kb on + strand at 202.767 kb on - strand at 202.767 kb on - strand at 202.808 kb on - strand at 202.929 kb on + strand at 202.981 kb on - strand at 202.991 kb on - strand at 203.042 kb on - strand at 203.042 kb on - strand at 203.058 kb on - strand at 203.065 kb on + strand at 203.069 kb on + strand at 203.074 kb on + strand at 203.099 kb on - strand at 203.101 kb on - strand at 203.106 kb on + strand at 203.118 kb on + strand at 203.118 kb on + strand at 203.118 kb on + strand at 203.138 kb on - strand at 203.152 kb on + strand at 203.179 kb on - strand at 203.211 kb on + strand at 203.218 kb on + strand at 203.218 kb on + strand at 203.221 kb on + strand at 203.224 kb on - strand at 203.270 kb on + strand at 203.273 kb on - strand at 203.278 kb on - strand at 203.385 kb on + strand at 203.393 kb on - strand at 203.393 kb on - strand at 203.393 kb on - strand at 203.406 kb on + strand at 203.462 kb on + strand at 203.462 kb on + strand at 203.483 kb on + strand at 203.562 kb on + strand at 203.566 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.0002 mg/ml remove 201,494 + -1.4 201,502 - -1.2 201,525 + -0.6 201,533 - -0.2 201,533 - -0.7 201,543 - +0.2 201,551 - -0.7 201,577 - -0.2 201,698 + -0.2 201,698 + -1.2 201,704 + -0.7 201,722 - +0.7 201,723 + -1.4 201,908 - +0.1 201,929 + +1.3 201,929 + -2.1 201,937 - +0.7 201,937 - -1.4 201,965 + -2.1 201,999 - -0.4 202,057 - -0.9 202,083 - +3.4 202,246 - -1.1 202,297 - +0.4 202,297 - -0.5 202,350 - +2.7 202,362 + +0.2 202,370 - +0.6 202,377 + +0.2 202,394 + +0.9 202,413 - +1.1 202,471 + -0.7 202,481 - -1.2 202,483 + -0.9 202,486 - -1.1 202,494 - PGA1_c02230 0.12 -1.8 202,494 - PGA1_c02230 0.12 -1.4 202,513 - PGA1_c02230 0.22 -1.9 202,528 + PGA1_c02230 0.31 -1.0 202,528 + PGA1_c02230 0.31 +0.5 202,536 - PGA1_c02230 0.35 -0.2 202,536 - PGA1_c02230 0.35 -0.5 202,536 - PGA1_c02230 0.35 -2.1 202,549 - PGA1_c02230 0.42 -0.2 202,565 - PGA1_c02230 0.51 +0.7 202,595 + PGA1_c02230 0.68 -0.1 202,638 - +1.3 202,643 - +0.8 202,716 - -0.4 202,730 + -0.5 202,731 + +0.9 202,748 + -1.6 202,756 - +0.2 202,758 + +0.8 202,759 + -1.0 202,767 - -0.5 202,767 - +0.1 202,808 - +0.3 202,929 + -0.7 202,981 - +0.4 202,991 - +0.8 203,042 - +1.9 203,042 - -1.1 203,058 - -0.1 203,065 + +1.3 203,069 + +0.1 203,074 + -0.6 203,099 - -0.5 203,101 - -0.6 203,106 + -2.4 203,118 + -0.3 203,118 + -1.1 203,118 + -0.9 203,138 - +0.3 203,152 + +1.9 203,179 - +1.4 203,211 + +1.3 203,218 + +1.1 203,218 + -1.9 203,221 + -0.7 203,224 - -1.6 203,270 + +2.1 203,273 - +0.6 203,278 - +0.2 203,385 + +0.5 203,393 - +1.8 203,393 - +0.4 203,393 - -1.0 203,406 + -0.4 203,462 + +0.3 203,462 + -2.6 203,483 + -0.5 203,562 + -1.1 203,566 + -1.4
Or see this region's nucleotide sequence