Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_201 and HP15_202 overlap by 4 nucleotides HP15_202 and HP15_203 are separated by 4 nucleotides
HP15_201: HP15_201 - peptide transport system permease ABC transporter protein, at 188,562 to 189,599
_201
HP15_202: HP15_202 - oligopeptide/dipeptide ABC transporter, permease protein, at 189,596 to 190,528
_202
HP15_203: HP15_203 - oligopeptide/dipeptide ABC transporter, ATPase subunit, at 190,533 to 191,531
_203
HP15_204: HP15_204 - oligopeptide/dipeptide ABC transporter, ATPase subunit, at 191,528 to 192,538
_204
Position (kb) 189
190
191 Strain fitness (log2 ratio) -1
0
1
2 at 188.634 kb on + strand at 188.658 kb on + strand at 188.684 kb on + strand, within HP15_201 at 188.956 kb on - strand, within HP15_201 at 189.013 kb on + strand, within HP15_201 at 189.013 kb on - strand, within HP15_201 at 189.021 kb on - strand, within HP15_201 at 189.166 kb on + strand, within HP15_201 at 189.166 kb on + strand, within HP15_201 at 189.174 kb on - strand, within HP15_201 at 189.174 kb on - strand, within HP15_201 at 189.221 kb on + strand, within HP15_201 at 189.239 kb on + strand, within HP15_201 at 189.293 kb on + strand, within HP15_201 at 189.325 kb on - strand, within HP15_201 at 189.338 kb on + strand, within HP15_201 at 189.344 kb on - strand, within HP15_201 at 189.393 kb on - strand, within HP15_201 at 189.441 kb on + strand, within HP15_201 at 189.504 kb on - strand at 189.556 kb on + strand at 189.568 kb on - strand at 189.571 kb on - strand at 189.766 kb on + strand, within HP15_202 at 189.774 kb on - strand, within HP15_202 at 189.774 kb on - strand, within HP15_202 at 189.859 kb on + strand, within HP15_202 at 189.984 kb on - strand, within HP15_202 at 190.057 kb on + strand, within HP15_202 at 190.057 kb on + strand, within HP15_202 at 190.065 kb on - strand, within HP15_202 at 190.065 kb on - strand, within HP15_202 at 190.138 kb on + strand, within HP15_202 at 190.157 kb on + strand, within HP15_202 at 190.300 kb on - strand, within HP15_202 at 190.375 kb on - strand, within HP15_202 at 190.421 kb on - strand, within HP15_202 at 190.506 kb on + strand at 190.506 kb on + strand at 190.523 kb on + strand at 190.524 kb on - strand at 190.531 kb on + strand at 190.531 kb on - strand at 190.539 kb on - strand at 190.582 kb on + strand at 190.622 kb on + strand at 190.622 kb on + strand at 190.630 kb on - strand at 190.653 kb on - strand, within HP15_203 at 190.746 kb on + strand, within HP15_203 at 190.771 kb on + strand, within HP15_203 at 190.792 kb on + strand, within HP15_203 at 190.845 kb on + strand, within HP15_203 at 190.853 kb on - strand, within HP15_203 at 190.886 kb on - strand, within HP15_203 at 190.923 kb on + strand, within HP15_203 at 190.923 kb on + strand, within HP15_203 at 190.923 kb on + strand, within HP15_203 at 190.923 kb on + strand, within HP15_203 at 190.931 kb on - strand, within HP15_203 at 190.931 kb on - strand, within HP15_203 at 190.967 kb on - strand, within HP15_203 at 190.992 kb on - strand, within HP15_203 at 190.994 kb on + strand, within HP15_203 at 190.994 kb on + strand, within HP15_203 at 191.164 kb on + strand, within HP15_203 at 191.273 kb on + strand, within HP15_203 at 191.273 kb on + strand, within HP15_203 at 191.273 kb on + strand, within HP15_203 at 191.275 kb on + strand, within HP15_203 at 191.281 kb on - strand, within HP15_203 at 191.281 kb on - strand, within HP15_203 at 191.299 kb on - strand, within HP15_203 at 191.308 kb on + strand, within HP15_203 at 191.311 kb on - strand, within HP15_203 at 191.418 kb on - strand, within HP15_203
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 188,634 + +1.0 188,658 + +0.4 188,684 + HP15_201 0.12 +0.8 188,956 - HP15_201 0.38 +0.6 189,013 + HP15_201 0.43 +1.3 189,013 - HP15_201 0.43 +1.5 189,021 - HP15_201 0.44 +0.7 189,166 + HP15_201 0.58 +2.3 189,166 + HP15_201 0.58 +1.1 189,174 - HP15_201 0.59 +1.8 189,174 - HP15_201 0.59 -0.1 189,221 + HP15_201 0.63 +1.1 189,239 + HP15_201 0.65 +0.8 189,293 + HP15_201 0.70 +1.0 189,325 - HP15_201 0.74 +2.7 189,338 + HP15_201 0.75 +0.7 189,344 - HP15_201 0.75 +0.8 189,393 - HP15_201 0.80 +0.7 189,441 + HP15_201 0.85 +1.0 189,504 - +0.7 189,556 + +1.1 189,568 - -0.2 189,571 - +1.0 189,766 + HP15_202 0.18 +0.6 189,774 - HP15_202 0.19 +2.0 189,774 - HP15_202 0.19 +0.4 189,859 + HP15_202 0.28 +1.1 189,984 - HP15_202 0.42 +0.9 190,057 + HP15_202 0.49 +0.7 190,057 + HP15_202 0.49 +0.7 190,065 - HP15_202 0.50 +1.1 190,065 - HP15_202 0.50 +0.7 190,138 + HP15_202 0.58 +1.3 190,157 + HP15_202 0.60 +0.8 190,300 - HP15_202 0.75 +1.2 190,375 - HP15_202 0.83 +1.9 190,421 - HP15_202 0.88 +1.0 190,506 + +0.6 190,506 + +0.3 190,523 + +0.2 190,524 - +1.0 190,531 + +0.2 190,531 - +0.9 190,539 - +0.9 190,582 + +0.8 190,622 + +0.4 190,622 + +0.5 190,630 - +0.6 190,653 - HP15_203 0.12 +0.3 190,746 + HP15_203 0.21 +2.1 190,771 + HP15_203 0.24 +0.2 190,792 + HP15_203 0.26 -0.7 190,845 + HP15_203 0.31 -1.2 190,853 - HP15_203 0.32 +1.3 190,886 - HP15_203 0.35 +1.6 190,923 + HP15_203 0.39 +1.5 190,923 + HP15_203 0.39 +0.6 190,923 + HP15_203 0.39 +0.3 190,923 + HP15_203 0.39 +0.6 190,931 - HP15_203 0.40 +2.0 190,931 - HP15_203 0.40 +0.8 190,967 - HP15_203 0.43 +0.6 190,992 - HP15_203 0.46 +0.6 190,994 + HP15_203 0.46 -0.0 190,994 + HP15_203 0.46 +1.2 191,164 + HP15_203 0.63 +1.5 191,273 + HP15_203 0.74 +0.2 191,273 + HP15_203 0.74 +0.3 191,273 + HP15_203 0.74 +0.5 191,275 + HP15_203 0.74 +1.0 191,281 - HP15_203 0.75 +1.5 191,281 - HP15_203 0.75 +0.5 191,299 - HP15_203 0.77 +0.4 191,308 + HP15_203 0.78 +1.1 191,311 - HP15_203 0.78 +0.1 191,418 - HP15_203 0.89 +1.3
Or see this region's nucleotide sequence