Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c19970

Experiment: m.b. Fusidic 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.0002 mg/ml
2,070,680	+				-0.8
2,070,683	-				+2.4
2,070,687	+				+0.2
2,070,694	+				+0.2
2,070,694	+				+2.3
2,070,695	-				-0.2
2,070,702	-				-1.4
2,070,766	+				+2.8
2,071,010	-		PGA1_c19960	0.31	+0.8
2,071,043	-		PGA1_c19960	0.35	+0.4
2,071,064	+		PGA1_c19960	0.39	-1.5
2,071,155	+		PGA1_c19960	0.52	+1.0
2,071,181	+		PGA1_c19960	0.55	+1.8
2,071,181	+		PGA1_c19960	0.55	+0.2
2,071,182	-		PGA1_c19960	0.56	+1.8
2,071,182	-		PGA1_c19960	0.56	-0.8
2,071,238	+		PGA1_c19960	0.64	+0.2
2,071,238	+		PGA1_c19960	0.64	-0.8
2,071,238	+		PGA1_c19960	0.64	-0.5
2,071,246	-		PGA1_c19960	0.65	-1.0
2,071,246	-		PGA1_c19960	0.65	+1.8
2,071,246	-		PGA1_c19960	0.65	+0.8
2,071,246	-		PGA1_c19960	0.65	-0.5
2,071,385	+		PGA1_c19960	0.85	-0.5
2,071,618	-				+0.8
2,071,636	+				-0.2
2,071,636	+				+1.8
2,071,658	+				+1.8
2,071,668	+				+2.1
2,071,676	-				-0.5
2,071,684	-				+1.8
2,071,686	+				-0.2
2,071,686	+				-0.8
2,071,689	-				-0.8
2,071,694	-				-0.8
2,071,721	-				+0.5
2,071,750	+				-0.8
2,071,776	+		PGA1_c19970	0.10	-1.8
2,071,803	+		PGA1_c19970	0.13	-1.0
2,071,871	-		PGA1_c19970	0.20	+1.2
2,071,907	+		PGA1_c19970	0.23	-1.0
2,071,920	+		PGA1_c19970	0.25	+0.2
2,071,922	+		PGA1_c19970	0.25	+1.8
2,071,928	-		PGA1_c19970	0.26	-1.5
2,071,945	-		PGA1_c19970	0.27	+0.8
2,071,977	+		PGA1_c19970	0.30	+0.9
2,072,027	-		PGA1_c19970	0.35	-0.2
2,072,138	-		PGA1_c19970	0.47	-0.5
2,072,153	-		PGA1_c19970	0.48	-0.5
2,072,155	+		PGA1_c19970	0.48	+0.2
2,072,189	+		PGA1_c19970	0.52	+1.0
2,072,222	+		PGA1_c19970	0.55	-1.0
2,072,222	+		PGA1_c19970	0.55	+0.2
2,072,222	+		PGA1_c19970	0.55	-0.2
2,072,222	+		PGA1_c19970	0.55	+0.8
2,072,230	-		PGA1_c19970	0.56	-1.0
2,072,230	-		PGA1_c19970	0.56	+1.4
2,072,291	+		PGA1_c19970	0.62	-1.2
2,072,309	+		PGA1_c19970	0.64	+1.8
2,072,408	-		PGA1_c19970	0.74	+2.4
2,072,583	-				-0.8
2,072,598	+				-0.2
2,072,598	+				+2.1
2,072,619	+				+1.8
2,072,624	+				+0.8
2,072,624	+				+2.8
2,072,627	-				-0.5
2,072,632	-				-0.5
2,072,632	-				-0.5
2,072,692	-				+3.4
2,072,699	-				-1.2
2,072,737	+		PGA1_c19980	0.11	+0.8
2,072,737	+		PGA1_c19980	0.11	-1.4
2,072,745	-		PGA1_c19980	0.12	-0.5
2,072,745	-		PGA1_c19980	0.12	-1.2
2,072,784	+		PGA1_c19980	0.20	-0.4
2,072,812	-		PGA1_c19980	0.25	+1.8
2,072,981	-		PGA1_c19980	0.56	+2.4
2,072,986	+		PGA1_c19980	0.57	-1.2
2,073,038	-		PGA1_c19980	0.66	+0.2
2,073,064	-		PGA1_c19980	0.71	+1.3
2,073,243	-				-0.2
2,073,248	-				-1.2
2,073,329	-				-2.2
2,073,463	+		PGA1_c19990	0.18	+1.8
2,073,517	+		PGA1_c19990	0.23	+0.2
2,073,525	-		PGA1_c19990	0.23	+1.8
2,073,577	-		PGA1_c19990	0.28	+0.8
2,073,586	+		PGA1_c19990	0.28	+0.2
2,073,594	-		PGA1_c19990	0.29	-0.8
2,073,594	-		PGA1_c19990	0.29	+1.0