Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c19950

Experiment: m.b. Fusidic 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.0002 mg/ml
2,068,930	+		PGA1_c19940	0.24	-0.8
2,068,938	-		PGA1_c19940	0.25	-1.9
2,068,942	+		PGA1_c19940	0.25	-0.5
2,068,947	+		PGA1_c19940	0.26	+1.8
2,068,948	-		PGA1_c19940	0.26	-0.5
2,069,033	+		PGA1_c19940	0.33	-0.2
2,069,033	+		PGA1_c19940	0.33	+0.9
2,069,033	+		PGA1_c19940	0.33	-0.6
2,069,033	+		PGA1_c19940	0.33	+1.8
2,069,033	+		PGA1_c19940	0.33	-0.2
2,069,033	+		PGA1_c19940	0.33	-0.8
2,069,033	+		PGA1_c19940	0.33	-0.2
2,069,033	+		PGA1_c19940	0.33	-0.2
2,069,033	+		PGA1_c19940	0.33	+1.8
2,069,033	+		PGA1_c19940	0.33	+2.1
2,069,041	-		PGA1_c19940	0.34	+1.8
2,069,041	-		PGA1_c19940	0.34	+1.8
2,069,058	+		PGA1_c19940	0.35	-1.4
2,069,106	-		PGA1_c19940	0.39	+1.0
2,069,106	-		PGA1_c19940	0.39	+0.8
2,069,128	-		PGA1_c19940	0.41	-0.2
2,069,135	+		PGA1_c19940	0.42	-0.0
2,069,177	-		PGA1_c19940	0.45	+0.2
2,069,225	+		PGA1_c19940	0.49	+0.8
2,069,271	-		PGA1_c19940	0.53	-0.3
2,069,343	+		PGA1_c19940	0.59	-1.5
2,069,346	-		PGA1_c19940	0.59	+0.4
2,069,469	+		PGA1_c19940	0.70	-1.2
2,069,481	+		PGA1_c19940	0.71	+0.2
2,069,487	-		PGA1_c19940	0.71	+0.8
2,069,487	-		PGA1_c19940	0.71	-0.7
2,069,489	+		PGA1_c19940	0.71	+1.2
2,069,504	-		PGA1_c19940	0.73	-1.5
2,069,510	+		PGA1_c19940	0.73	+0.2
2,069,538	+		PGA1_c19940	0.75	-0.8
2,069,539	+		PGA1_c19940	0.75	-2.3
2,069,546	-		PGA1_c19940	0.76	-0.2
2,069,546	-		PGA1_c19940	0.76	+0.2
2,069,546	-		PGA1_c19940	0.76	+2.1
2,069,547	-		PGA1_c19940	0.76	+0.6
2,069,608	-		PGA1_c19940	0.81	-1.9
2,069,608	-		PGA1_c19940	0.81	+2.1
2,069,631	-		PGA1_c19940	0.83	+0.2
2,069,654	+		PGA1_c19940	0.85	+0.8
2,069,693	+		PGA1_c19940	0.88	+2.4
2,069,750	-				-0.2
2,069,785	+				-0.4
2,069,833	+				-0.8
2,069,841	-				+2.3
2,069,841	-				-1.4
2,069,898	+				-0.8
2,070,050	-		PGA1_c19950	0.18	-1.4
2,070,080	+		PGA1_c19950	0.22	-0.2
2,070,088	-		PGA1_c19950	0.23	-0.2
2,070,092	+		PGA1_c19950	0.23	+0.2
2,070,172	-		PGA1_c19950	0.33	-1.9
2,070,177	+		PGA1_c19950	0.34	+1.8
2,070,182	+		PGA1_c19950	0.34	-0.8
2,070,197	+		PGA1_c19950	0.36	+1.8
2,070,313	-		PGA1_c19950	0.50	-0.5
2,070,362	+		PGA1_c19950	0.56	+0.2
2,070,394	+		PGA1_c19950	0.59	+0.8
2,070,395	+		PGA1_c19950	0.60	-0.2
2,070,403	-		PGA1_c19950	0.61	-1.5
2,070,403	-		PGA1_c19950	0.61	-0.8
2,070,405	+		PGA1_c19950	0.61	-0.8
2,070,405	+		PGA1_c19950	0.61	+1.8
2,070,464	-		PGA1_c19950	0.68	+2.4
2,070,473	+		PGA1_c19950	0.69	+0.4
2,070,481	-		PGA1_c19950	0.70	-0.2
2,070,491	-		PGA1_c19950	0.71	+1.4
2,070,508	+		PGA1_c19950	0.73	+1.8
2,070,680	+				-0.8
2,070,683	-				+2.4
2,070,687	+				+0.2
2,070,694	+				+0.2
2,070,694	+				+2.3
2,070,695	-				-0.2
2,070,702	-				-1.4
2,070,766	+				+2.8
2,071,010	-		PGA1_c19960	0.31	+0.8
2,071,043	-		PGA1_c19960	0.35	+0.4
2,071,064	+		PGA1_c19960	0.39	-1.5
2,071,155	+		PGA1_c19960	0.52	+1.0
2,071,181	+		PGA1_c19960	0.55	+1.8
2,071,181	+		PGA1_c19960	0.55	+0.2
2,071,182	-		PGA1_c19960	0.56	+1.8
2,071,182	-		PGA1_c19960	0.56	-0.8
2,071,238	+		PGA1_c19960	0.64	+0.2
2,071,238	+		PGA1_c19960	0.64	-0.8
2,071,238	+		PGA1_c19960	0.64	-0.5
2,071,246	-		PGA1_c19960	0.65	-1.0
2,071,246	-		PGA1_c19960	0.65	+1.8
2,071,246	-		PGA1_c19960	0.65	+0.8
2,071,246	-		PGA1_c19960	0.65	-0.5
2,071,385	+		PGA1_c19960	0.85	-0.5
2,071,618	-				+0.8
2,071,636	+				-0.2
2,071,636	+				+1.8
2,071,658	+				+1.8
2,071,668	+				+2.1
2,071,676	-				-0.5
2,071,684	-				+1.8
2,071,686	+				-0.2
2,071,686	+				-0.8
2,071,689	-				-0.8
2,071,694	-				-0.8
2,071,721	-				+0.5