Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1913 and HP15_1914 overlap by 4 nucleotides HP15_1914 and HP15_1915 are separated by 2 nucleotides
HP15_1913: HP15_1913 - glycosyltransferase, at 2,026,798 to 2,027,919
_1913
HP15_1914: HP15_1914 - asparagine synthase, glutamine-hydrolyzing, at 2,027,916 to 2,029,814
_1914
HP15_1915: HP15_1915 - glycosyl transferase, group 1, at 2,029,817 to 2,030,968
_1915
Position (kb)
2027
2028
2029
2030 Strain fitness (log2 ratio)
-2
-1
0
1 at 2026.916 kb on - strand, within HP15_1913 at 2027.022 kb on - strand, within HP15_1913 at 2027.048 kb on + strand, within HP15_1913 at 2027.124 kb on - strand, within HP15_1913 at 2027.133 kb on - strand, within HP15_1913 at 2027.148 kb on + strand, within HP15_1913 at 2027.296 kb on - strand, within HP15_1913 at 2027.350 kb on + strand, within HP15_1913 at 2027.355 kb on + strand, within HP15_1913 at 2027.358 kb on - strand, within HP15_1913 at 2027.399 kb on - strand, within HP15_1913 at 2027.491 kb on + strand, within HP15_1913 at 2027.501 kb on - strand, within HP15_1913 at 2027.506 kb on - strand, within HP15_1913 at 2027.542 kb on - strand at 2027.617 kb on + strand, within HP15_1913 at 2027.625 kb on - strand, within HP15_1913 at 2027.652 kb on - strand, within HP15_1913 at 2027.726 kb on - strand, within HP15_1913 at 2027.856 kb on + strand at 2027.976 kb on - strand at 2028.005 kb on + strand at 2028.027 kb on + strand at 2028.225 kb on - strand, within HP15_1914 at 2028.322 kb on + strand, within HP15_1914 at 2028.587 kb on + strand, within HP15_1914 at 2028.803 kb on + strand, within HP15_1914 at 2028.968 kb on - strand, within HP15_1914 at 2028.987 kb on + strand, within HP15_1914 at 2029.109 kb on + strand, within HP15_1914 at 2029.121 kb on + strand, within HP15_1914 at 2029.121 kb on + strand, within HP15_1914 at 2029.129 kb on - strand, within HP15_1914 at 2029.233 kb on - strand, within HP15_1914 at 2029.444 kb on + strand, within HP15_1914 at 2029.661 kb on - strand at 2029.688 kb on - strand at 2029.728 kb on + strand at 2029.747 kb on + strand at 2029.964 kb on - strand, within HP15_1915 at 2030.029 kb on - strand, within HP15_1915 at 2030.228 kb on - strand, within HP15_1915 at 2030.271 kb on + strand, within HP15_1915 at 2030.285 kb on + strand, within HP15_1915 at 2030.300 kb on - strand, within HP15_1915 at 2030.530 kb on - strand, within HP15_1915 at 2030.531 kb on + strand, within HP15_1915 at 2030.562 kb on + strand, within HP15_1915 at 2030.587 kb on + strand, within HP15_1915 at 2030.612 kb on + strand, within HP15_1915 at 2030.698 kb on - strand at 2030.714 kb on + strand, within HP15_1915 at 2030.812 kb on - strand, within HP15_1915
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 2,026,916 - HP15_1913 0.11 +0.2 2,027,022 - HP15_1913 0.20 +1.1 2,027,048 + HP15_1913 0.22 -0.5 2,027,124 - HP15_1913 0.29 -1.6 2,027,133 - HP15_1913 0.30 +0.2 2,027,148 + HP15_1913 0.31 -2.7 2,027,296 - HP15_1913 0.44 +0.4 2,027,350 + HP15_1913 0.49 -0.3 2,027,355 + HP15_1913 0.50 +0.3 2,027,358 - HP15_1913 0.50 +0.6 2,027,399 - HP15_1913 0.54 +0.3 2,027,491 + HP15_1913 0.62 +0.1 2,027,501 - HP15_1913 0.63 +0.0 2,027,506 - HP15_1913 0.63 +0.3 2,027,542 - +1.5 2,027,617 + HP15_1913 0.73 +0.1 2,027,625 - HP15_1913 0.74 +0.1 2,027,652 - HP15_1913 0.76 -0.1 2,027,726 - HP15_1913 0.83 -1.0 2,027,856 + -0.2 2,027,976 - -0.0 2,028,005 + -1.5 2,028,027 + +0.1 2,028,225 - HP15_1914 0.16 -0.4 2,028,322 + HP15_1914 0.21 -0.6 2,028,587 + HP15_1914 0.35 +0.9 2,028,803 + HP15_1914 0.47 -0.1 2,028,968 - HP15_1914 0.55 +0.2 2,028,987 + HP15_1914 0.56 +0.4 2,029,109 + HP15_1914 0.63 +0.4 2,029,121 + HP15_1914 0.63 -0.5 2,029,121 + HP15_1914 0.63 +0.4 2,029,129 - HP15_1914 0.64 +0.7 2,029,233 - HP15_1914 0.69 -0.4 2,029,444 + HP15_1914 0.80 +0.1 2,029,661 - -0.0 2,029,688 - +0.3 2,029,728 + -0.1 2,029,747 + -0.1 2,029,964 - HP15_1915 0.13 +0.5 2,030,029 - HP15_1915 0.18 +1.3 2,030,228 - HP15_1915 0.36 +0.4 2,030,271 + HP15_1915 0.39 -1.4 2,030,285 + HP15_1915 0.41 -0.3 2,030,300 - HP15_1915 0.42 +0.1 2,030,530 - HP15_1915 0.62 +0.1 2,030,531 + HP15_1915 0.62 +0.3 2,030,562 + HP15_1915 0.65 -0.2 2,030,587 + HP15_1915 0.67 -0.9 2,030,612 + HP15_1915 0.69 -0.4 2,030,698 - -0.1 2,030,714 + HP15_1915 0.78 +0.3 2,030,812 - HP15_1915 0.86 -0.7
Or see this region's nucleotide sequence