Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1765 and HP15_1766 overlap by 11 nucleotides HP15_1766 and HP15_1767 are separated by 215 nucleotides HP15_1767 and HP15_1768 are separated by 33 nucleotides
HP15_1765: HP15_1765 - HD superfamily phosphohydrolase, at 1,863,306 to 1,864,790
_1765
HP15_1766: HP15_1766 - FAD dependent oxidoreductase, at 1,864,780 to 1,865,808
_1766
HP15_1767: HP15_1767 - hypothetical protein, at 1,866,024 to 1,866,311
_1767
HP15_1768: HP15_1768 - delta 9 acyl-lipid fatty acid desaturase, at 1,866,345 to 1,866,881
_1768
Position (kb)
1864
1865
1866 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1863.870 kb on - strand, within HP15_1765 at 1864.128 kb on - strand, within HP15_1765 at 1864.167 kb on - strand, within HP15_1765 at 1864.268 kb on - strand, within HP15_1765 at 1864.328 kb on - strand, within HP15_1765 at 1864.339 kb on + strand, within HP15_1765 at 1864.350 kb on + strand, within HP15_1765 at 1864.572 kb on - strand, within HP15_1765 at 1864.572 kb on - strand, within HP15_1765 at 1864.630 kb on + strand, within HP15_1765 at 1864.691 kb on + strand at 1864.785 kb on + strand at 1865.132 kb on + strand, within HP15_1766 at 1865.132 kb on + strand, within HP15_1766 at 1865.132 kb on + strand, within HP15_1766 at 1865.218 kb on - strand, within HP15_1766 at 1865.366 kb on + strand, within HP15_1766 at 1865.434 kb on - strand, within HP15_1766 at 1865.436 kb on + strand, within HP15_1766 at 1865.552 kb on - strand, within HP15_1766 at 1865.552 kb on - strand, within HP15_1766 at 1865.606 kb on + strand, within HP15_1766 at 1865.673 kb on + strand, within HP15_1766 at 1865.706 kb on + strand at 1865.747 kb on - strand at 1865.756 kb on - strand at 1865.756 kb on - strand at 1865.773 kb on + strand at 1865.787 kb on + strand at 1865.843 kb on + strand at 1865.848 kb on + strand at 1865.878 kb on - strand at 1865.884 kb on - strand at 1866.058 kb on - strand, within HP15_1767 at 1866.114 kb on + strand, within HP15_1767 at 1866.126 kb on + strand, within HP15_1767 at 1866.179 kb on + strand, within HP15_1767 at 1866.229 kb on + strand, within HP15_1767 at 1866.247 kb on - strand, within HP15_1767 at 1866.253 kb on + strand, within HP15_1767 at 1866.401 kb on - strand, within HP15_1768 at 1866.445 kb on - strand, within HP15_1768 at 1866.508 kb on + strand, within HP15_1768 at 1866.619 kb on - strand, within HP15_1768 at 1866.664 kb on + strand, within HP15_1768 at 1866.716 kb on + strand, within HP15_1768 at 1866.772 kb on + strand, within HP15_1768 at 1866.772 kb on + strand, within HP15_1768 at 1866.774 kb on - strand, within HP15_1768 at 1866.799 kb on - strand, within HP15_1768
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 1,863,870 - HP15_1765 0.38 -0.9 1,864,128 - HP15_1765 0.55 +1.0 1,864,167 - HP15_1765 0.58 -1.3 1,864,268 - HP15_1765 0.65 -0.2 1,864,328 - HP15_1765 0.69 -0.4 1,864,339 + HP15_1765 0.70 -0.3 1,864,350 + HP15_1765 0.70 -1.1 1,864,572 - HP15_1765 0.85 -0.9 1,864,572 - HP15_1765 0.85 -1.8 1,864,630 + HP15_1765 0.89 -0.2 1,864,691 + +2.6 1,864,785 + -0.7 1,865,132 + HP15_1766 0.34 +0.1 1,865,132 + HP15_1766 0.34 +0.4 1,865,132 + HP15_1766 0.34 +0.4 1,865,218 - HP15_1766 0.43 +1.3 1,865,366 + HP15_1766 0.57 +0.1 1,865,434 - HP15_1766 0.64 +0.1 1,865,436 + HP15_1766 0.64 -0.2 1,865,552 - HP15_1766 0.75 -0.5 1,865,552 - HP15_1766 0.75 +0.2 1,865,606 + HP15_1766 0.80 -0.5 1,865,673 + HP15_1766 0.87 -0.9 1,865,706 + +0.7 1,865,747 - +0.4 1,865,756 - -0.1 1,865,756 - +0.4 1,865,773 + +1.7 1,865,787 + +1.2 1,865,843 + +0.2 1,865,848 + +1.0 1,865,878 - +0.2 1,865,884 - -1.6 1,866,058 - HP15_1767 0.12 -1.0 1,866,114 + HP15_1767 0.31 -0.5 1,866,126 + HP15_1767 0.35 +1.2 1,866,179 + HP15_1767 0.54 -0.4 1,866,229 + HP15_1767 0.71 -0.5 1,866,247 - HP15_1767 0.77 +0.1 1,866,253 + HP15_1767 0.80 -0.0 1,866,401 - HP15_1768 0.10 -1.0 1,866,445 - HP15_1768 0.19 -0.5 1,866,508 + HP15_1768 0.30 +2.0 1,866,619 - HP15_1768 0.51 -0.8 1,866,664 + HP15_1768 0.59 -0.8 1,866,716 + HP15_1768 0.69 -2.2 1,866,772 + HP15_1768 0.80 +0.1 1,866,772 + HP15_1768 0.80 -2.3 1,866,774 - HP15_1768 0.80 -1.8 1,866,799 - HP15_1768 0.85 +0.6
Or see this region's nucleotide sequence