Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1402 and HP15_1403 are separated by 93 nucleotides
HP15_1402: HP15_1402 - conserved hypothetical protein, at 1,481,288 to 1,483,480
_1402
HP15_1403: HP15_1403 - aspartate racemase, at 1,483,574 to 1,484,269
_1403
Position (kb)
1481
1482
1483
1484 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1480.383 kb on - strand at 1480.428 kb on - strand at 1480.493 kb on + strand at 1480.496 kb on - strand at 1480.546 kb on - strand at 1480.547 kb on + strand at 1480.548 kb on + strand at 1480.625 kb on - strand at 1480.910 kb on - strand at 1481.094 kb on - strand at 1481.190 kb on - strand at 1481.233 kb on + strand at 1481.238 kb on + strand at 1481.238 kb on + strand at 1481.429 kb on + strand at 1481.429 kb on + strand at 1481.502 kb on - strand at 1481.543 kb on + strand, within HP15_1402 at 1481.564 kb on + strand, within HP15_1402 at 1481.658 kb on - strand, within HP15_1402 at 1481.794 kb on + strand, within HP15_1402 at 1481.806 kb on - strand, within HP15_1402 at 1481.866 kb on + strand, within HP15_1402 at 1481.945 kb on - strand, within HP15_1402 at 1481.950 kb on - strand, within HP15_1402 at 1482.267 kb on - strand, within HP15_1402 at 1482.478 kb on + strand, within HP15_1402 at 1482.478 kb on + strand, within HP15_1402 at 1482.492 kb on + strand, within HP15_1402 at 1482.572 kb on + strand, within HP15_1402 at 1482.658 kb on + strand, within HP15_1402 at 1482.672 kb on - strand, within HP15_1402 at 1482.692 kb on - strand, within HP15_1402 at 1482.706 kb on + strand, within HP15_1402 at 1482.744 kb on + strand, within HP15_1402 at 1482.768 kb on + strand, within HP15_1402 at 1482.828 kb on + strand, within HP15_1402 at 1482.834 kb on - strand, within HP15_1402 at 1482.834 kb on - strand, within HP15_1402 at 1482.917 kb on - strand, within HP15_1402 at 1482.917 kb on - strand, within HP15_1402 at 1483.031 kb on + strand, within HP15_1402 at 1483.098 kb on + strand, within HP15_1402 at 1483.155 kb on + strand, within HP15_1402 at 1483.212 kb on - strand, within HP15_1402 at 1483.215 kb on + strand, within HP15_1402 at 1483.259 kb on + strand, within HP15_1402 at 1483.334 kb on - strand at 1483.334 kb on - strand at 1483.336 kb on + strand at 1483.344 kb on - strand at 1483.497 kb on - strand at 1483.601 kb on + strand at 1483.758 kb on + strand, within HP15_1403 at 1483.817 kb on + strand, within HP15_1403 at 1484.051 kb on + strand, within HP15_1403 at 1484.171 kb on - strand, within HP15_1403 at 1484.254 kb on + strand at 1484.283 kb on + strand at 1484.301 kb on + strand at 1484.309 kb on - strand at 1484.311 kb on + strand at 1484.319 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 1,480,383 - +0.8 1,480,428 - +0.1 1,480,493 + -0.3 1,480,496 - -1.6 1,480,546 - +0.6 1,480,547 + -0.1 1,480,548 + -0.2 1,480,625 - -0.3 1,480,910 - +0.8 1,481,094 - -0.6 1,481,190 - -0.0 1,481,233 + +0.8 1,481,238 + -0.4 1,481,238 + -0.4 1,481,429 + -0.0 1,481,429 + -0.7 1,481,502 - +0.2 1,481,543 + HP15_1402 0.12 +0.3 1,481,564 + HP15_1402 0.13 -0.4 1,481,658 - HP15_1402 0.17 +0.2 1,481,794 + HP15_1402 0.23 -1.9 1,481,806 - HP15_1402 0.24 -0.1 1,481,866 + HP15_1402 0.26 -0.5 1,481,945 - HP15_1402 0.30 +0.5 1,481,950 - HP15_1402 0.30 +0.0 1,482,267 - HP15_1402 0.45 -0.2 1,482,478 + HP15_1402 0.54 -0.1 1,482,478 + HP15_1402 0.54 +0.1 1,482,492 + HP15_1402 0.55 +1.1 1,482,572 + HP15_1402 0.59 -1.1 1,482,658 + HP15_1402 0.62 +0.1 1,482,672 - HP15_1402 0.63 -1.4 1,482,692 - HP15_1402 0.64 -0.0 1,482,706 + HP15_1402 0.65 -0.4 1,482,744 + HP15_1402 0.66 -0.1 1,482,768 + HP15_1402 0.67 -1.0 1,482,828 + HP15_1402 0.70 +1.7 1,482,834 - HP15_1402 0.70 +0.3 1,482,834 - HP15_1402 0.70 -0.6 1,482,917 - HP15_1402 0.74 -1.2 1,482,917 - HP15_1402 0.74 +1.2 1,483,031 + HP15_1402 0.79 -0.1 1,483,098 + HP15_1402 0.83 -0.2 1,483,155 + HP15_1402 0.85 -0.7 1,483,212 - HP15_1402 0.88 -0.4 1,483,215 + HP15_1402 0.88 +0.3 1,483,259 + HP15_1402 0.90 -0.6 1,483,334 - +0.3 1,483,334 - +0.1 1,483,336 + +0.7 1,483,344 - -0.2 1,483,497 - -0.5 1,483,601 + +0.1 1,483,758 + HP15_1403 0.26 -0.1 1,483,817 + HP15_1403 0.35 -1.3 1,484,051 + HP15_1403 0.69 +0.2 1,484,171 - HP15_1403 0.86 +0.3 1,484,254 + -0.6 1,484,283 + -0.3 1,484,301 + +1.5 1,484,309 - +1.9 1,484,311 + +0.2 1,484,319 - +1.1
Or see this region's nucleotide sequence