Strain Fitness in Marinobacter adhaerens HP15 around HP15_1402

Experiment: m.b. Cisplatin 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1402 and HP15_1403 are separated by 93 nucleotides HP15_1402: HP15_1402 - conserved hypothetical protein, at 1,481,288 to 1,483,480 _1402 HP15_1403: HP15_1403 - aspartate racemase, at 1,483,574 to 1,484,269 _1403 Position (kb) 1481 1482 1483 1484Strain fitness (log2 ratio) -2 -1 0 1 2at 1480.383 kb on - strandat 1480.428 kb on - strandat 1480.493 kb on + strandat 1480.496 kb on - strandat 1480.546 kb on - strandat 1480.547 kb on + strandat 1480.548 kb on + strandat 1480.625 kb on - strandat 1480.910 kb on - strandat 1481.094 kb on - strandat 1481.190 kb on - strandat 1481.233 kb on + strandat 1481.238 kb on + strandat 1481.238 kb on + strandat 1481.429 kb on + strandat 1481.429 kb on + strandat 1481.502 kb on - strandat 1481.543 kb on + strand, within HP15_1402at 1481.564 kb on + strand, within HP15_1402at 1481.658 kb on - strand, within HP15_1402at 1481.794 kb on + strand, within HP15_1402at 1481.806 kb on - strand, within HP15_1402at 1481.866 kb on + strand, within HP15_1402at 1481.945 kb on - strand, within HP15_1402at 1481.950 kb on - strand, within HP15_1402at 1482.267 kb on - strand, within HP15_1402at 1482.478 kb on + strand, within HP15_1402at 1482.478 kb on + strand, within HP15_1402at 1482.492 kb on + strand, within HP15_1402at 1482.572 kb on + strand, within HP15_1402at 1482.658 kb on + strand, within HP15_1402at 1482.672 kb on - strand, within HP15_1402at 1482.692 kb on - strand, within HP15_1402at 1482.706 kb on + strand, within HP15_1402at 1482.744 kb on + strand, within HP15_1402at 1482.768 kb on + strand, within HP15_1402at 1482.828 kb on + strand, within HP15_1402at 1482.834 kb on - strand, within HP15_1402at 1482.834 kb on - strand, within HP15_1402at 1482.917 kb on - strand, within HP15_1402at 1482.917 kb on - strand, within HP15_1402at 1483.031 kb on + strand, within HP15_1402at 1483.098 kb on + strand, within HP15_1402at 1483.155 kb on + strand, within HP15_1402at 1483.212 kb on - strand, within HP15_1402at 1483.215 kb on + strand, within HP15_1402at 1483.259 kb on + strand, within HP15_1402at 1483.334 kb on - strandat 1483.334 kb on - strandat 1483.336 kb on + strandat 1483.344 kb on - strandat 1483.497 kb on - strandat 1483.601 kb on + strandat 1483.758 kb on + strand, within HP15_1403at 1483.817 kb on + strand, within HP15_1403at 1484.051 kb on + strand, within HP15_1403at 1484.171 kb on - strand, within HP15_1403at 1484.254 kb on + strandat 1484.283 kb on + strandat 1484.301 kb on + strandat 1484.309 kb on - strandat 1484.311 kb on + strandat 1484.319 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml
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1,480,383 - +0.8
1,480,428 - +0.1
1,480,493 + -0.3
1,480,496 - -1.6
1,480,546 - +0.6
1,480,547 + -0.1
1,480,548 + -0.2
1,480,625 - -0.3
1,480,910 - +0.8
1,481,094 - -0.6
1,481,190 - -0.0
1,481,233 + +0.8
1,481,238 + -0.4
1,481,238 + -0.4
1,481,429 + -0.0
1,481,429 + -0.7
1,481,502 - +0.2
1,481,543 + HP15_1402 0.12 +0.3
1,481,564 + HP15_1402 0.13 -0.4
1,481,658 - HP15_1402 0.17 +0.2
1,481,794 + HP15_1402 0.23 -1.9
1,481,806 - HP15_1402 0.24 -0.1
1,481,866 + HP15_1402 0.26 -0.5
1,481,945 - HP15_1402 0.30 +0.5
1,481,950 - HP15_1402 0.30 +0.0
1,482,267 - HP15_1402 0.45 -0.2
1,482,478 + HP15_1402 0.54 -0.1
1,482,478 + HP15_1402 0.54 +0.1
1,482,492 + HP15_1402 0.55 +1.1
1,482,572 + HP15_1402 0.59 -1.1
1,482,658 + HP15_1402 0.62 +0.1
1,482,672 - HP15_1402 0.63 -1.4
1,482,692 - HP15_1402 0.64 -0.0
1,482,706 + HP15_1402 0.65 -0.4
1,482,744 + HP15_1402 0.66 -0.1
1,482,768 + HP15_1402 0.67 -1.0
1,482,828 + HP15_1402 0.70 +1.7
1,482,834 - HP15_1402 0.70 +0.3
1,482,834 - HP15_1402 0.70 -0.6
1,482,917 - HP15_1402 0.74 -1.2
1,482,917 - HP15_1402 0.74 +1.2
1,483,031 + HP15_1402 0.79 -0.1
1,483,098 + HP15_1402 0.83 -0.2
1,483,155 + HP15_1402 0.85 -0.7
1,483,212 - HP15_1402 0.88 -0.4
1,483,215 + HP15_1402 0.88 +0.3
1,483,259 + HP15_1402 0.90 -0.6
1,483,334 - +0.3
1,483,334 - +0.1
1,483,336 + +0.7
1,483,344 - -0.2
1,483,497 - -0.5
1,483,601 + +0.1
1,483,758 + HP15_1403 0.26 -0.1
1,483,817 + HP15_1403 0.35 -1.3
1,484,051 + HP15_1403 0.69 +0.2
1,484,171 - HP15_1403 0.86 +0.3
1,484,254 + -0.6
1,484,283 + -0.3
1,484,301 + +1.5
1,484,309 - +1.9
1,484,311 + +0.2
1,484,319 - +1.1

Or see this region's nucleotide sequence