Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c13900

Experiment: m.b. Fusidic 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.0002 mg/ml
1,436,368	+		PGA1_c13880	0.79	+1.7
1,436,368	+		PGA1_c13880	0.79	-0.3
1,436,368	+		PGA1_c13880	0.79	+1.0
1,436,368	+		PGA1_c13880	0.79	-0.5
1,436,376	-		PGA1_c13880	0.79	-1.0
1,436,376	-		PGA1_c13880	0.79	-0.2
1,436,376	-		PGA1_c13880	0.79	+0.6
1,436,376	-		PGA1_c13880	0.79	-1.3
1,436,390	-		PGA1_c13880	0.80	+0.3
1,436,430	+		PGA1_c13880	0.83	-0.5
1,436,480	-		PGA1_c13880	0.86	-1.1
1,436,532	-		PGA1_c13880	0.89	-2.1
1,436,559	-				-1.6
1,436,615	+				-1.5
1,436,639	+				-1.6
1,436,647	-				-1.9
1,436,647	-				+0.3
1,436,647	-				-0.7
1,436,676	+				-1.6
1,436,756	-				+0.8
1,436,756	-				-1.6
1,436,872	-		PGA1_c13890	0.24	-1.9
1,436,890	+		PGA1_c13890	0.29	-1.6
1,436,942	+		PGA1_c13890	0.42	+1.0
1,436,942	+		PGA1_c13890	0.42	+1.0
1,436,942	+		PGA1_c13890	0.42	+0.4
1,436,950	-		PGA1_c13890	0.44	-2.4
1,436,963	+		PGA1_c13890	0.48	-1.7
1,437,035	+		PGA1_c13890	0.67	-1.1
1,437,043	-		PGA1_c13890	0.69	-0.2
1,437,054	-		PGA1_c13890	0.72	+0.3
1,437,071	+		PGA1_c13890	0.76	+0.3
1,437,135	-				-0.3
1,437,191	-				-0.3
1,437,227	+				-0.0
1,437,227	+				-1.6
1,437,252	-				-1.2
1,437,258	-				-0.9
1,437,264	+				+1.2
1,437,272	-				-1.5
1,437,293	+				+0.4
1,437,293	+				-2.4
1,437,294	-				-0.6
1,437,298	+				+1.1
1,437,301	-				-0.5
1,437,364	+				+1.0
1,437,372	-				+1.2
1,437,372	-				+1.1
1,437,393	-				+0.5
1,437,433	+		PGA1_c13900	0.11	-1.3
1,437,433	+		PGA1_c13900	0.11	+1.2
1,437,433	+		PGA1_c13900	0.11	+0.1
1,437,441	-		PGA1_c13900	0.11	-0.7
1,437,441	-		PGA1_c13900	0.11	+0.6
1,437,441	-		PGA1_c13900	0.11	-0.7
1,437,441	-		PGA1_c13900	0.11	-0.7
1,437,441	-		PGA1_c13900	0.11	-2.5
1,437,441	-		PGA1_c13900	0.11	+0.7
1,437,441	-		PGA1_c13900	0.11	-0.9
1,437,441	-		PGA1_c13900	0.11	+0.7
1,437,457	+		PGA1_c13900	0.13	-2.3
1,437,460	-		PGA1_c13900	0.13	+1.0
1,437,460	-		PGA1_c13900	0.13	-1.3
1,437,465	-		PGA1_c13900	0.13	-1.0
1,437,529	+		PGA1_c13900	0.18	-0.7
1,437,537	-		PGA1_c13900	0.19	-1.5
1,437,558	+		PGA1_c13900	0.21	-0.5
1,437,580	+		PGA1_c13900	0.23	-0.2
1,437,585	+		PGA1_c13900	0.23	-1.3
1,437,585	+		PGA1_c13900	0.23	-0.0
1,437,590	-		PGA1_c13900	0.23	+0.7
1,437,662	+		PGA1_c13900	0.29	+1.4
1,437,785	+		PGA1_c13900	0.39	+0.4
1,437,883	+		PGA1_c13900	0.47	-0.9
1,437,916	+		PGA1_c13900	0.50	-2.1
1,437,919	-		PGA1_c13900	0.50	-1.5
1,437,924	-		PGA1_c13900	0.51	+0.7
1,437,931	+		PGA1_c13900	0.51	+1.6
1,438,015	-		PGA1_c13900	0.58	-0.3
1,438,016	-		PGA1_c13900	0.58	-1.5
1,438,016	-		PGA1_c13900	0.58	-1.5
1,438,032	-		PGA1_c13900	0.59	-1.5
1,438,075	-		PGA1_c13900	0.63	-1.9
1,438,082	-		PGA1_c13900	0.63	-1.0
1,438,090	-		PGA1_c13900	0.64	-1.4
1,438,173	+		PGA1_c13900	0.71	-0.0
1,438,183	+		PGA1_c13900	0.72	-0.6
1,438,218	+		PGA1_c13900	0.74	-0.6
1,438,238	+		PGA1_c13900	0.76	-3.4
1,438,238	+		PGA1_c13900	0.76	+0.7
1,438,240	+		PGA1_c13900	0.76	+0.8
1,438,250	-		PGA1_c13900	0.77	-2.9
1,438,294	+		PGA1_c13900	0.81	-0.5
1,438,319	-		PGA1_c13900	0.83	+1.7
1,438,403	-		PGA1_c13900	0.90	+0.3
1,438,437	+				-2.0
1,438,437	+				-0.3
1,438,448	-				+1.4
1,438,535	+				+1.4
1,438,658	+				-0.6
1,438,720	+		PGA1_c13910	0.11	+0.7
1,438,768	+		PGA1_c13910	0.15	-0.0
1,438,773	+		PGA1_c13910	0.15	+0.5
1,438,781	-		PGA1_c13910	0.16	-1.9
1,438,781	-		PGA1_c13910	0.16	-0.2
1,438,781	-		PGA1_c13910	0.16	+1.3
1,438,781	-		PGA1_c13910	0.16	-0.2
1,438,910	+		PGA1_c13910	0.25	-0.6
1,438,912	+		PGA1_c13910	0.25	-1.6
1,438,989	-		PGA1_c13910	0.30	+0.3
1,439,102	-		PGA1_c13910	0.38	+1.5
1,439,206	+		PGA1_c13910	0.45	+2.7
1,439,239	-		PGA1_c13910	0.47	-0.0
1,439,274	+		PGA1_c13910	0.50	-0.4
1,439,282	-		PGA1_c13910	0.50	-1.1
1,439,282	-		PGA1_c13910	0.50	+0.8
1,439,322	+		PGA1_c13910	0.53	-0.8
1,439,430	-		PGA1_c13910	0.61	+0.5
1,439,471	+		PGA1_c13910	0.64	-0.6