Strain Fitness in Shewanella amazonensis SB2B around Sama_2879

Experiment: L-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lactate
3,419,107	-				+0.9
3,419,107	-				-0.7
3,419,112	-				+1.2
3,419,138	+				-0.3
3,419,139	-				-1.8
3,419,168	+				+2.8
3,419,169	-				+0.4
3,419,208	+				+0.8
3,419,208	+				-0.9
3,419,208	+				-0.9
3,419,209	-				-2.7
3,419,209	-				+2.0
3,419,230	+				+0.8
3,419,271	-				-0.6
3,419,293	+				-2.0
3,419,293	+				+0.8
3,419,294	-				+1.0
3,419,335	+				-1.0
3,419,335	+				+0.4
3,419,335	+				-0.1
3,419,335	+				+0.3
3,419,335	+				+0.0
3,419,335	+				-1.4
3,419,335	+				+0.9
3,419,336	-				+0.4
3,419,336	-				-0.2
3,419,337	+				-1.6
3,419,374	+				-2.6
3,419,375	-				-0.4
3,419,432	-				+1.9
3,419,491	+		Sama_2879	0.15	+0.6
3,419,508	+		Sama_2879	0.16	-2.4
3,419,508	+		Sama_2879	0.16	-2.4
3,419,509	-		Sama_2879	0.16	-0.2
3,419,574	+		Sama_2879	0.23	-1.2
3,419,574	+		Sama_2879	0.23	-1.6
3,419,575	-		Sama_2879	0.23	-1.8
3,419,575	-		Sama_2879	0.23	+1.8
3,419,584	+		Sama_2879	0.24	-1.4
3,419,608	+		Sama_2879	0.27	-0.1
3,419,608	+		Sama_2879	0.27	-0.5
3,419,608	+		Sama_2879	0.27	-0.8
3,419,608	+		Sama_2879	0.27	+0.2
3,419,609	-		Sama_2879	0.27	-1.9
3,419,622	+		Sama_2879	0.28	+1.1
3,419,623	-		Sama_2879	0.28	+4.2
3,419,640	+		Sama_2879	0.30	-0.6
3,419,640	+		Sama_2879	0.30	+1.0
3,419,641	-		Sama_2879	0.30	-0.2
3,419,641	-		Sama_2879	0.30	-0.9
3,419,719	-		Sama_2879	0.38	-0.7
3,419,719	-		Sama_2879	0.38	-2.3
3,419,719	-		Sama_2879	0.38	+0.8
3,419,719	-		Sama_2879	0.38	-1.1
3,419,721	+		Sama_2879	0.38	-1.6
3,419,769	+		Sama_2879	0.43	-0.5
3,419,784	+		Sama_2879	0.44	-1.1
3,419,784	+		Sama_2879	0.44	+0.3
3,419,784	+		Sama_2879	0.44	+1.4
3,419,784	+		Sama_2879	0.44	-0.2
3,419,785	-		Sama_2879	0.45	-0.8
3,419,785	-		Sama_2879	0.45	-1.1
3,419,796	+		Sama_2879	0.46	+0.4
3,419,796	+		Sama_2879	0.46	+0.5
3,419,797	-		Sama_2879	0.46	-3.4
3,419,797	-		Sama_2879	0.46	-2.6
3,419,797	-		Sama_2879	0.46	-0.3
3,419,797	-		Sama_2879	0.46	-1.8
3,419,797	-		Sama_2879	0.46	-1.3
3,419,797	-		Sama_2879	0.46	-0.2
3,419,845	+		Sama_2879	0.51	+2.8
3,419,867	+		Sama_2879	0.53	-1.6
3,419,867	+		Sama_2879	0.53	-0.6
3,419,867	+		Sama_2879	0.53	-1.3
3,419,867	+		Sama_2879	0.53	-3.0
3,419,868	-		Sama_2879	0.53	+1.4
3,419,868	-		Sama_2879	0.53	-0.2
3,419,868	-		Sama_2879	0.53	-0.6
3,419,869	+		Sama_2879	0.53	+0.8
3,419,870	-		Sama_2879	0.53	+1.1
3,419,928	+		Sama_2879	0.59	+2.0
3,419,929	-		Sama_2879	0.59	+0.1
3,419,963	+		Sama_2879	0.63	-0.2
3,419,964	-		Sama_2879	0.63	-2.2
3,419,971	+		Sama_2879	0.63	+1.0
3,419,972	-		Sama_2879	0.64	+0.7
3,420,020	-		Sama_2879	0.68	-0.1
3,420,020	-		Sama_2879	0.68	+1.0
3,420,020	-		Sama_2879	0.68	-0.6
3,420,063	+		Sama_2879	0.73	+3.6
3,420,064	-		Sama_2879	0.73	-0.6
3,420,107	-		Sama_2879	0.77	+1.3
3,420,119	+		Sama_2879	0.78	-1.1
3,420,119	+		Sama_2879	0.78	-2.7
3,420,119	+		Sama_2879	0.78	-2.0
3,420,119	+		Sama_2879	0.78	-0.2
3,420,119	+		Sama_2879	0.78	+1.5
3,420,119	+		Sama_2879	0.78	-1.0
3,420,119	+		Sama_2879	0.78	-1.3
3,420,119	+		Sama_2879	0.78	+1.0
3,420,119	+		Sama_2879	0.78	+0.6
3,420,119	+		Sama_2879	0.78	+0.6
3,420,119	+		Sama_2879	0.78	-0.2
3,420,120	-		Sama_2879	0.79	-2.4
3,420,120	-		Sama_2879	0.79	-0.6
3,420,120	-		Sama_2879	0.79	-1.3
3,420,120	-		Sama_2879	0.79	-1.6
3,420,120	-		Sama_2879	0.79	+0.8
3,420,120	-		Sama_2879	0.79	+0.2
3,420,120	-		Sama_2879	0.79	-1.2
3,420,120	-		Sama_2879	0.79	+0.8
3,420,120	-		Sama_2879	0.79	-1.8
3,420,120	-		Sama_2879	0.79	-3.2
3,420,120	-		Sama_2879	0.79	+0.0
3,420,120	-		Sama_2879	0.79	+0.0
3,420,120	-		Sama_2879	0.79	-1.4
3,420,120	-		Sama_2879	0.79	-1.8
3,420,147	+		Sama_2879	0.81	+1.3
3,420,148	-		Sama_2879	0.81	-1.4
3,420,164	+		Sama_2879	0.83	-1.7
3,420,179	+		Sama_2879	0.85	-1.5
3,420,180	-		Sama_2879	0.85	-1.2
3,420,180	-		Sama_2879	0.85	-1.6
3,420,180	-		Sama_2879	0.85	+1.4
3,420,180	-		Sama_2879	0.85	-2.5
3,420,181	+		Sama_2879	0.85	+0.1
3,420,181	+		Sama_2879	0.85	-1.0
3,420,181	+		Sama_2879	0.85	+1.5
3,420,181	+		Sama_2879	0.85	-0.5
3,420,182	-		Sama_2879	0.85	-1.0
3,420,182	-		Sama_2879	0.85	-0.8
3,420,185	-		Sama_2879	0.85	+2.6
3,420,185	-		Sama_2879	0.85	-0.2
3,420,225	+		Sama_2879	0.89	-0.6
3,420,225	+		Sama_2879	0.89	-0.2
3,420,226	-		Sama_2879	0.89	-0.4
3,420,226	-		Sama_2879	0.89	-3.4
3,420,233	+				-0.4
3,420,234	-				+0.6
3,420,234	-				-0.7
3,420,234	-				+0.1
3,420,338	+				+1.1
3,420,338	+				+1.6
3,420,338	+				-2.0
3,420,338	+				+0.3
3,420,338	+				-2.4
3,420,338	+				-1.4
3,420,338	+				-2.4
3,420,338	+				-0.4
3,420,338	+				+2.2
3,420,339	-				+0.7
3,420,339	-				+0.2
3,420,346	-				-1.6
3,420,353	-				-0.7
3,420,360	-				-0.7
3,420,360	-				+0.1
3,420,381	-				-1.2
3,420,394	+				-1.3
3,420,401	+				-2.2
3,420,408	+				+0.2
3,420,415	+				-0.8
3,420,422	+				-0.6
3,420,422	+				-0.6
3,420,432	+				+0.0
3,420,432	+				+0.6
3,420,494	+				+1.2
3,420,495	-				-1.5
3,420,520	+				-0.2
3,420,520	+				+1.0
3,420,521	-				-1.2
3,420,608	-				+0.6
3,420,608	-				+3.0
3,420,608	-				-0.4
3,420,623	+				-0.3
3,420,623	+				+0.0
3,420,623	+				-1.6
3,420,624	-				-1.6
3,420,624	-				+0.2
3,420,630	+				-0.8
3,420,630	+				+1.9
3,420,631	-				-0.4
3,420,631	-				-0.6
3,420,693	+		Sama_2880	0.11	-2.4
3,420,693	+		Sama_2880	0.11	-1.8
3,420,693	+		Sama_2880	0.11	+0.1
3,420,693	+		Sama_2880	0.11	+1.1
3,420,693	+		Sama_2880	0.11	+0.8
3,420,694	-		Sama_2880	0.11	-1.0
3,420,694	-		Sama_2880	0.11	-0.7
3,420,694	-		Sama_2880	0.11	+0.8
3,420,858	+		Sama_2880	0.21	+0.7
3,420,859	-		Sama_2880	0.21	-0.6
3,420,859	-		Sama_2880	0.21	+0.9
3,420,859	-		Sama_2880	0.21	-1.3
3,420,886	-		Sama_2880	0.23	+0.3
3,421,014	+		Sama_2880	0.31	+0.4
3,421,104	+		Sama_2880	0.36	+2.1
3,421,104	+		Sama_2880	0.36	-3.0
3,421,105	-		Sama_2880	0.36	+1.9
3,421,105	-		Sama_2880	0.36	-2.2
3,421,173	+		Sama_2880	0.40	-2.0
3,421,173	+		Sama_2880	0.40	-0.3
3,421,173	+		Sama_2880	0.40	-1.7
3,421,222	-		Sama_2880	0.43	-0.2
3,421,255	-		Sama_2880	0.45	-0.6
3,421,309	+		Sama_2880	0.48	+0.0
3,421,324	-		Sama_2880	0.49	-1.3