Strain Fitness in Shewanella amazonensis SB2B around Sama_2708

Experiment: L-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lactate
3,238,991	-				+0.3
3,238,991	-				+0.2
3,238,991	-				+1.5
3,238,991	-				+2.5
3,238,991	-				-0.5
3,239,002	+				+0.2
3,239,002	+				+1.2
3,239,002	+				+1.1
3,239,003	-				+0.5
3,239,003	-				-0.4
3,239,003	-				+0.1
3,239,011	+				+0.4
3,239,012	-				-2.2
3,239,012	-				-0.8
3,239,012	-				+0.5
3,239,012	-				-1.4
3,239,018	-				-0.6
3,239,018	-				+0.4
3,239,054	+				+1.1
3,239,061	+				+1.3
3,239,062	-				-1.7
3,239,062	-				+0.8
3,239,062	-				+0.3
3,239,071	+				-2.9
3,239,072	-				+0.2
3,239,143	+				-0.6
3,239,143	+				-0.0
3,239,143	+				-2.0
3,239,143	+				-0.6
3,239,143	+				+2.5
3,239,144	-				-0.0
3,239,151	-				+2.5
3,239,266	+				+0.8
3,239,266	+				+1.0
3,239,266	+				+0.6
3,239,266	+				-2.0
3,239,266	+				+0.2
3,239,266	+				+0.2
3,239,266	+				+0.9
3,239,266	+				-2.0
3,239,266	+				+1.4
3,239,266	+				+1.3
3,239,266	+				+1.7
3,239,266	+				-1.2
3,239,266	+				+0.8
3,239,266	+				-0.4
3,239,266	+				-0.8
3,239,267	-				-2.4
3,239,267	-				+0.4
3,239,267	-				-1.6
3,239,267	-				-2.0
3,239,267	-				-0.1
3,239,267	-				+0.5
3,239,267	-				-2.0
3,239,267	-				-0.2
3,239,267	-				+0.5
3,239,267	-				+2.1
3,239,267	-				-2.0
3,239,267	-				-1.1
3,239,267	-				+0.2
3,239,267	-				-2.2
3,239,267	-				-2.8
3,239,422	+		Sama_2707	0.10	-1.3
3,239,423	-		Sama_2707	0.11	-0.0
3,239,430	+		Sama_2707	0.12	-2.8
3,239,430	+		Sama_2707	0.12	-1.5
3,239,431	-		Sama_2707	0.13	-1.6
3,239,431	-		Sama_2707	0.13	+0.5
3,239,453	+		Sama_2707	0.18	-0.4
3,239,464	+		Sama_2707	0.20	+2.1
3,239,465	-		Sama_2707	0.21	+1.3
3,239,465	-		Sama_2707	0.21	-0.4
3,239,465	-		Sama_2707	0.21	+0.5
3,239,474	-		Sama_2707	0.23	+0.2
3,239,496	+		Sama_2707	0.28	-1.3
3,239,496	+		Sama_2707	0.28	-2.4
3,239,497	-		Sama_2707	0.28	-2.7
3,239,497	-		Sama_2707	0.28	+0.7
3,239,525	+		Sama_2707	0.35	+0.7
3,239,525	+		Sama_2707	0.35	-1.4
3,239,595	+		Sama_2707	0.52	-1.0
3,239,596	-		Sama_2707	0.52	-0.6
3,239,596	-		Sama_2707	0.52	-0.0
3,239,596	-		Sama_2707	0.52	+0.4
3,239,596	-		Sama_2707	0.52	+1.0
3,239,596	-		Sama_2707	0.52	+0.5
3,239,596	-		Sama_2707	0.52	-0.2
3,239,598	+		Sama_2707	0.52	+0.5
3,239,598	+		Sama_2707	0.52	+1.4
3,239,599	-		Sama_2707	0.53	+0.2
3,239,694	+		Sama_2707	0.75	+0.6
3,239,694	+		Sama_2707	0.75	+0.1
3,239,694	+		Sama_2707	0.75	+1.8
3,239,695	-		Sama_2707	0.75	+0.8
3,239,720	+		Sama_2707	0.81	+0.1
3,239,721	-		Sama_2707	0.82	-0.3
3,239,721	-		Sama_2707	0.82	+0.7
3,239,843	-				-0.8
3,239,898	+				-2.0
3,239,899	-				-0.6
3,239,899	-				-0.3
3,239,899	-				+0.2
3,239,899	-				-0.0
3,239,899	-				+0.4
3,239,899	-				+0.2
3,239,918	+				+0.2
3,239,918	+				-1.0
3,239,918	+				+1.6
3,239,918	+				+0.9
3,239,918	+				+0.5
3,239,918	+				-1.0
3,239,918	+				+1.6
3,239,918	+				+0.4
3,239,919	-				+1.4
3,239,919	-				-0.9
3,239,919	-				+1.2
3,239,919	-				+1.4
3,239,919	-				+1.5
3,239,963	+				+0.7
3,239,964	-				-0.7
3,240,016	+				+2.3
3,240,016	+				+0.3
3,240,017	-				-2.0
3,240,028	+				-1.6
3,240,028	+				+1.9
3,240,028	+				-0.7
3,240,028	+				+1.5
3,240,028	+				+1.7
3,240,028	+				+0.2
3,240,028	+				+1.5
3,240,028	+				+0.7
3,240,028	+				+1.6
3,240,028	+				-2.3
3,240,028	+				+0.5
3,240,029	-				-2.3
3,240,029	-				+0.7
3,240,029	-				-0.3
3,240,029	-				+0.3
3,240,029	-				+1.0
3,240,029	-				+0.2
3,240,029	-				-1.0
3,240,029	-				-1.5
3,240,029	-				-0.4
3,240,029	-				+1.8
3,240,029	-				+0.7
3,240,029	-				-1.8
3,240,036	-				-0.9
3,240,036	-				+0.2
3,240,038	+				+1.8
3,240,038	+				+1.0
3,240,038	+				+1.3
3,240,039	-				-0.8
3,240,078	-				-1.4
3,240,174	-		Sama_2708	0.17	-0.4
3,240,174	-		Sama_2708	0.17	-0.5
3,240,174	-		Sama_2708	0.17	+1.0
3,240,195	+		Sama_2708	0.19	-1.0
3,240,195	+		Sama_2708	0.19	+0.4
3,240,195	+		Sama_2708	0.19	-1.0
3,240,196	-		Sama_2708	0.19	-1.8
3,240,196	-		Sama_2708	0.19	-0.7
3,240,265	+		Sama_2708	0.26	+0.8
3,240,265	+		Sama_2708	0.26	+0.3
3,240,288	+		Sama_2708	0.28	+1.1
3,240,289	-		Sama_2708	0.28	+1.4
3,240,289	-		Sama_2708	0.28	-1.7
3,240,317	+		Sama_2708	0.31	+2.0
3,240,317	+		Sama_2708	0.31	+1.4
3,240,389	+		Sama_2708	0.37	+1.2
3,240,389	+		Sama_2708	0.37	-1.9
3,240,390	-		Sama_2708	0.37	+0.2
3,240,393	+		Sama_2708	0.38	+0.1
3,240,393	+		Sama_2708	0.38	+1.0
3,240,393	+		Sama_2708	0.38	+1.6
3,240,393	+		Sama_2708	0.38	+1.2
3,240,393	+		Sama_2708	0.38	-0.6
3,240,393	+		Sama_2708	0.38	+1.5
3,240,393	+		Sama_2708	0.38	+1.2
3,240,393	+		Sama_2708	0.38	-1.6
3,240,393	+		Sama_2708	0.38	+0.1
3,240,393	+		Sama_2708	0.38	+1.4
3,240,393	+		Sama_2708	0.38	+0.1
3,240,393	+		Sama_2708	0.38	+1.8
3,240,393	+		Sama_2708	0.38	-0.6
3,240,393	+		Sama_2708	0.38	-2.2
3,240,394	-		Sama_2708	0.38	+0.8
3,240,394	-		Sama_2708	0.38	-0.4
3,240,394	-		Sama_2708	0.38	-0.5
3,240,394	-		Sama_2708	0.38	-0.5
3,240,394	-		Sama_2708	0.38	+0.2
3,240,394	-		Sama_2708	0.38	+0.6
3,240,394	-		Sama_2708	0.38	-0.6
3,240,394	-		Sama_2708	0.38	-0.5
3,240,394	-		Sama_2708	0.38	-2.6
3,240,552	+		Sama_2708	0.53	+0.3
3,240,552	+		Sama_2708	0.53	+0.8
3,240,552	+		Sama_2708	0.53	-2.0
3,240,552	+		Sama_2708	0.53	-1.2
3,240,552	+		Sama_2708	0.53	+1.6
3,240,553	-		Sama_2708	0.53	+0.0
3,240,553	-		Sama_2708	0.53	-1.5
3,240,569	+		Sama_2708	0.54	+3.0
3,240,569	+		Sama_2708	0.54	-1.3
3,240,582	+		Sama_2708	0.55	-0.2
3,240,646	-		Sama_2708	0.61	-0.6
3,240,646	-		Sama_2708	0.61	-0.2
3,240,675	+		Sama_2708	0.64	-0.0
3,240,675	+		Sama_2708	0.64	+0.6
3,240,675	+		Sama_2708	0.64	+2.9
3,240,675	+		Sama_2708	0.64	-1.4
3,240,676	-		Sama_2708	0.64	+0.3
3,240,735	+		Sama_2708	0.70	+2.6
3,240,736	-		Sama_2708	0.70	-0.6
3,240,736	-		Sama_2708	0.70	-1.0
3,240,744	+		Sama_2708	0.71	+0.6
3,240,744	+		Sama_2708	0.71	+0.2
3,240,767	+		Sama_2708	0.73	-0.6
3,240,831	-		Sama_2708	0.79	+0.3
3,240,840	+		Sama_2708	0.79	-0.0
3,240,840	+		Sama_2708	0.79	+0.6
3,240,841	-		Sama_2708	0.80	-0.7
3,240,856	+		Sama_2708	0.81	+0.7
3,240,856	+		Sama_2708	0.81	+0.3
3,240,856	+		Sama_2708	0.81	-0.6
3,240,857	-		Sama_2708	0.81	+1.0
3,240,857	-		Sama_2708	0.81	-0.7
3,240,857	-		Sama_2708	0.81	+0.5
3,240,857	-		Sama_2708	0.81	+1.4
3,240,933	+		Sama_2708	0.88	-1.4
3,240,933	+		Sama_2708	0.88	+1.4
3,240,933	+		Sama_2708	0.88	+1.0
3,240,934	-		Sama_2708	0.88	-2.0
3,240,963	+				-2.2
3,240,963	+				-1.6
3,240,964	-				+2.0
3,240,964	-				-0.5
3,240,988	+				+1.9
3,240,988	+				-0.0
3,240,988	+				-2.0
3,240,988	+				-0.6
3,240,988	+				+1.5
3,240,988	+				-1.0
3,240,988	+				-0.4
3,240,988	+				-2.7
3,240,988	+				+1.5
3,240,988	+				+1.1
3,240,988	+				-2.0
3,240,989	-				+1.0
3,240,989	-				-2.1
3,240,989	-				+0.6
3,240,989	-				-0.8
3,240,994	+				+0.1
3,240,994	+				+1.0
3,240,994	+				-0.8
3,240,994	+				-1.2
3,240,994	+				+1.0
3,240,994	+				-1.6
3,240,995	-				-2.7
3,240,995	-				+0.1
3,240,995	-				+0.7
3,240,995	-				+0.6
3,240,995	-				+0.6
3,240,995	-				-1.6
3,240,995	-				+0.2
3,240,995	-				-0.7
3,240,995	-				+0.6
3,240,996	+				-0.7
3,240,997	-				-0.0
3,241,091	+				+1.8
3,241,136	+				-1.0
3,241,136	+				-1.7
3,241,136	+				-1.4
3,241,136	+				+2.7
3,241,136	+				-0.6
3,241,189	-				+0.3
3,241,197	+				+1.4
3,241,198	-				+1.2
3,241,198	-				-2.2
3,241,211	+				+0.6
3,241,211	+				-0.0
3,241,211	+				+0.1
3,241,211	+				-1.4
3,241,212	-				+0.3
3,241,227	+				+0.6
3,241,227	+				+0.6
3,241,228	-				+1.3
3,241,228	-				+0.8
3,241,231	+				-0.1
3,241,254	+				-1.4
3,241,254	+				+0.8
3,241,254	+				-0.0
3,241,255	-				-1.2
3,241,255	-				-1.4
3,241,255	-				-0.6
3,241,255	-				+0.8
3,241,259	+		Sama_2709	0.10	+2.0
3,241,260	-		Sama_2709	0.10	-1.6
3,241,260	-		Sama_2709	0.10	+0.5
3,241,285	-		Sama_2709	0.13	+1.4
3,241,320	-		Sama_2709	0.16	+1.1
3,241,410	+		Sama_2709	0.24	-3.4
3,241,410	+		Sama_2709	0.24	-1.8
3,241,411	-		Sama_2709	0.25	-3.8
3,241,496	+		Sama_2709	0.33	+1.0
3,241,496	+		Sama_2709	0.33	-1.5
3,241,496	+		Sama_2709	0.33	+1.5
3,241,497	-		Sama_2709	0.33	+1.3
3,241,497	-		Sama_2709	0.33	+0.6
3,241,497	-		Sama_2709	0.33	-2.0
3,241,499	-		Sama_2709	0.33	+1.1
3,241,499	-		Sama_2709	0.33	-0.7
3,241,499	-		Sama_2709	0.33	-2.9
3,241,554	+		Sama_2709	0.38	-2.8
3,241,554	+		Sama_2709	0.38	-0.4
3,241,554	+		Sama_2709	0.38	-0.6
3,241,554	+		Sama_2709	0.38	+2.2
3,241,554	+		Sama_2709	0.38	+1.3
3,241,554	+		Sama_2709	0.38	-0.5
3,241,554	+		Sama_2709	0.38	-3.2
3,241,554	+		Sama_2709	0.38	-0.6
3,241,555	-		Sama_2709	0.38	+0.6
3,241,555	-		Sama_2709	0.38	+0.9
3,241,555	-		Sama_2709	0.38	-0.8
3,241,555	-		Sama_2709	0.38	-0.8
3,241,576	-		Sama_2709	0.40	-1.5
3,241,634	-		Sama_2709	0.46	+0.4
3,241,636	+		Sama_2709	0.46	+0.1
3,241,636	+		Sama_2709	0.46	+0.4
3,241,636	+		Sama_2709	0.46	-0.5
3,241,637	-		Sama_2709	0.46	-0.4
3,241,637	-		Sama_2709	0.46	-1.1
3,241,637	-		Sama_2709	0.46	-0.6
3,241,637	-		Sama_2709	0.46	+1.1
3,241,643	+		Sama_2709	0.47	-0.6
3,241,644	-		Sama_2709	0.47	-0.2
3,241,644	-		Sama_2709	0.47	-1.0
3,241,644	-		Sama_2709	0.47	-0.8
3,241,717	+		Sama_2709	0.54	+2.6
3,241,718	-		Sama_2709	0.54	-0.1
3,241,718	-		Sama_2709	0.54	-2.5
3,241,726	+		Sama_2709	0.55	-1.6
3,241,727	-		Sama_2709	0.55	-1.4
3,241,727	-		Sama_2709	0.55	+2.4
3,241,843	+		Sama_2709	0.66	+0.7
3,241,843	+		Sama_2709	0.66	+0.2
3,241,843	+		Sama_2709	0.66	+0.6
3,241,843	+		Sama_2709	0.66	+1.2
3,241,844	-		Sama_2709	0.66	-1.8
3,241,844	-		Sama_2709	0.66	-0.6
3,241,844	-		Sama_2709	0.66	-1.4
3,241,883	-		Sama_2709	0.70	+0.6
3,241,913	+		Sama_2709	0.72	+0.5
3,241,913	+		Sama_2709	0.72	-0.5
3,241,913	+		Sama_2709	0.72	-0.1
3,241,913	+		Sama_2709	0.72	-1.8
3,241,913	+		Sama_2709	0.72	-2.8
3,241,913	+		Sama_2709	0.72	-1.5
3,241,913	+		Sama_2709	0.72	-1.8
3,241,913	+		Sama_2709	0.72	+0.1
3,241,913	+		Sama_2709	0.72	+1.7
3,241,914	-		Sama_2709	0.73	+0.6
3,241,914	-		Sama_2709	0.73	-0.4
3,241,914	-		Sama_2709	0.73	+0.4
3,241,914	-		Sama_2709	0.73	+0.4
3,241,914	-		Sama_2709	0.73	-0.1
3,241,914	-		Sama_2709	0.73	+0.7
3,241,914	-		Sama_2709	0.73	-0.6
3,241,914	-		Sama_2709	0.73	+1.0
3,241,914	-		Sama_2709	0.73	-0.7
3,241,984	+		Sama_2709	0.79	-0.2