Strain Fitness in Shewanella amazonensis SB2B around Sama_2484

Experiment: L-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lactate
2,984,298	+		Sama_2483	0.25	-0.1
2,984,298	+		Sama_2483	0.25	-0.7
2,984,299	-		Sama_2483	0.25	+1.1
2,984,299	-		Sama_2483	0.25	-3.0
2,984,391	+		Sama_2483	0.33	-0.9
2,984,417	-		Sama_2483	0.35	-1.9
2,984,556	+		Sama_2483	0.47	+0.1
2,984,556	+		Sama_2483	0.47	-0.7
2,984,556	+		Sama_2483	0.47	-0.0
2,984,557	-		Sama_2483	0.48	-1.1
2,984,557	-		Sama_2483	0.48	-1.5
2,984,557	-		Sama_2483	0.48	+0.6
2,984,575	-		Sama_2483	0.49	+0.1
2,984,597	+		Sama_2483	0.51	-1.0
2,984,598	-		Sama_2483	0.51	-1.9
2,984,620	+		Sama_2483	0.53	-0.4
2,984,620	+		Sama_2483	0.53	-1.9
2,984,621	-		Sama_2483	0.53	-1.3
2,984,675	-		Sama_2483	0.58	-0.4
2,984,675	-		Sama_2483	0.58	+0.4
2,984,678	+		Sama_2483	0.58	-0.1
2,984,678	+		Sama_2483	0.58	+0.7
2,984,679	-		Sama_2483	0.58	+1.2
2,984,679	-		Sama_2483	0.58	-0.1
2,984,679	-		Sama_2483	0.58	+0.3
2,984,679	-		Sama_2483	0.58	-0.4
2,984,679	-		Sama_2483	0.58	-1.9
2,984,723	+		Sama_2483	0.62	+1.4
2,984,723	+		Sama_2483	0.62	-0.8
2,984,723	+		Sama_2483	0.62	-1.7
2,984,724	-		Sama_2483	0.62	+0.3
2,984,724	-		Sama_2483	0.62	-2.3
2,984,724	-		Sama_2483	0.62	-0.7
2,984,738	+		Sama_2483	0.63	-1.9
2,984,767	+		Sama_2483	0.66	-0.6
2,984,768	-		Sama_2483	0.66	-1.0
2,984,777	+		Sama_2483	0.67	+0.6
2,984,778	-		Sama_2483	0.67	+0.1
2,984,796	-		Sama_2483	0.69	+2.2
2,984,855	-		Sama_2483	0.74	+1.0
2,984,872	-		Sama_2483	0.75	-1.4
2,984,906	+		Sama_2483	0.78	-0.3
2,984,907	-		Sama_2483	0.78	+0.1
2,985,078	+				-2.3
2,985,078	+				+1.0
2,985,078	+				-2.6
2,985,135	+				+1.3
2,985,136	-				-2.1
2,985,136	-				-2.2
2,985,192	-				+0.7
2,985,193	+				-0.1
2,985,193	+				+0.9
2,985,193	+				-0.7
2,985,194	-				+0.9
2,985,194	-				+1.4
2,985,194	-				-0.7
2,985,194	-				+1.7
2,985,194	-				+0.9
2,985,225	+				-1.7
2,985,226	-				+0.1
2,985,226	-				-1.7
2,985,229	-				+0.4
2,985,234	+				-2.6
2,985,234	+				-0.8
2,985,264	-				-2.9
2,985,277	+				+3.4
2,985,305	+				-1.1
2,985,305	+				+1.0
2,985,305	+				+0.4
2,985,306	-				+0.0
2,985,306	-				+1.9
2,985,306	-				+0.0
2,985,306	-				+0.5
2,985,306	-				+0.4
2,985,306	-				+1.6
2,985,309	+				-2.3
2,985,309	+				-0.1
2,985,310	-				+0.0
2,985,310	-				+1.3
2,985,310	-				-1.6
2,985,310	-				-0.1
2,985,312	-				+0.7
2,985,479	+				-0.5
2,985,503	+		Sama_2484	0.11	+0.3
2,985,504	-		Sama_2484	0.11	-2.7
2,985,540	+		Sama_2484	0.13	+0.9
2,985,540	+		Sama_2484	0.13	+1.4
2,985,540	+		Sama_2484	0.13	+1.4
2,985,540	+		Sama_2484	0.13	-0.8
2,985,624	-		Sama_2484	0.17	+2.0
2,985,705	+		Sama_2484	0.22	-0.7
2,985,705	+		Sama_2484	0.22	-1.9
2,985,726	+		Sama_2484	0.23	-0.0
2,985,745	-		Sama_2484	0.24	-0.0
2,985,745	-		Sama_2484	0.24	+0.3
2,985,776	+		Sama_2484	0.26	+0.0
2,985,777	-		Sama_2484	0.26	-0.1
2,985,777	-		Sama_2484	0.26	+1.2
2,985,797	+		Sama_2484	0.27	-1.7
2,985,819	+		Sama_2484	0.28	-0.4
2,985,819	+		Sama_2484	0.28	+0.4
2,985,819	+		Sama_2484	0.28	+0.1
2,985,819	+		Sama_2484	0.28	+1.1
2,985,819	+		Sama_2484	0.28	+0.5
2,985,819	+		Sama_2484	0.28	+1.3
2,985,819	+		Sama_2484	0.28	+0.0
2,985,820	-		Sama_2484	0.28	-1.7
2,985,820	-		Sama_2484	0.28	-2.3
2,985,820	-		Sama_2484	0.28	+1.6
2,985,820	-		Sama_2484	0.28	-1.0
2,985,820	-		Sama_2484	0.28	-0.1
2,985,821	+		Sama_2484	0.28	+2.0
2,985,821	+		Sama_2484	0.28	-1.8
2,985,863	+		Sama_2484	0.30	+0.1
2,985,863	+		Sama_2484	0.30	+0.3
2,985,944	+		Sama_2484	0.34	-0.6
2,985,944	+		Sama_2484	0.34	+0.2
2,985,945	-		Sama_2484	0.35	+1.5
2,985,945	-		Sama_2484	0.35	+0.3
2,985,945	-		Sama_2484	0.35	-1.6
2,985,945	-		Sama_2484	0.35	+0.3
2,985,947	+		Sama_2484	0.35	-2.9
2,985,947	+		Sama_2484	0.35	+0.2
2,985,947	+		Sama_2484	0.35	-1.0
2,985,947	+		Sama_2484	0.35	-1.7
2,985,947	+		Sama_2484	0.35	+0.7
2,985,948	-		Sama_2484	0.35	+0.1
2,985,948	-		Sama_2484	0.35	-1.9
2,985,948	-		Sama_2484	0.35	-0.7
2,986,101	+		Sama_2484	0.43	-1.9
2,986,101	+		Sama_2484	0.43	+0.3
2,986,102	-		Sama_2484	0.43	-0.3
2,986,102	-		Sama_2484	0.43	+1.4
2,986,102	-		Sama_2484	0.43	+0.1
2,986,182	-		Sama_2484	0.47	-2.5
2,986,340	+		Sama_2484	0.56	+0.7
2,986,341	-		Sama_2484	0.56	+0.7
2,986,346	+		Sama_2484	0.56	-0.8
2,986,346	+		Sama_2484	0.56	+1.2
2,986,353	-		Sama_2484	0.56	+1.4
2,986,401	+		Sama_2484	0.59	-0.1
2,986,401	+		Sama_2484	0.59	+0.2
2,986,401	+		Sama_2484	0.59	-0.8
2,986,401	+		Sama_2484	0.59	+1.5
2,986,401	+		Sama_2484	0.59	+0.1
2,986,402	-		Sama_2484	0.59	+0.2
2,986,433	+		Sama_2484	0.60	-0.5
2,986,433	+		Sama_2484	0.60	-1.1
2,986,433	+		Sama_2484	0.60	+0.4
2,986,433	+		Sama_2484	0.60	+2.2
2,986,433	+		Sama_2484	0.60	-1.8
2,986,434	-		Sama_2484	0.61	+0.6
2,986,434	-		Sama_2484	0.61	-1.1
2,986,434	-		Sama_2484	0.61	-2.6
2,986,434	-		Sama_2484	0.61	+0.4
2,986,434	-		Sama_2484	0.61	+0.9
2,986,434	-		Sama_2484	0.61	+0.1
2,986,434	-		Sama_2484	0.61	+0.4
2,986,489	+		Sama_2484	0.63	+0.2
2,986,536	+		Sama_2484	0.66	-2.3
2,986,536	+		Sama_2484	0.66	+1.3
2,986,536	+		Sama_2484	0.66	+1.3
2,986,537	-		Sama_2484	0.66	-0.1
2,986,537	-		Sama_2484	0.66	+0.9
2,986,537	-		Sama_2484	0.66	+0.1
2,986,575	+		Sama_2484	0.68	+2.0
2,986,575	+		Sama_2484	0.68	+1.4
2,986,576	-		Sama_2484	0.68	+1.9
2,986,576	-		Sama_2484	0.68	-0.4
2,986,576	-		Sama_2484	0.68	-0.5
2,986,578	+		Sama_2484	0.68	+1.2
2,986,578	+		Sama_2484	0.68	+0.6
2,986,578	+		Sama_2484	0.68	-1.1
2,986,578	+		Sama_2484	0.68	-1.7
2,986,579	-		Sama_2484	0.68	+0.6
2,986,579	-		Sama_2484	0.68	+2.4
2,986,579	-		Sama_2484	0.68	-3.2
2,986,579	-		Sama_2484	0.68	-0.5
2,986,591	-		Sama_2484	0.69	-0.2
2,986,614	+		Sama_2484	0.70	+0.9
2,986,614	+		Sama_2484	0.70	+0.1
2,986,635	+		Sama_2484	0.71	+0.3
2,986,635	+		Sama_2484	0.71	-0.3
2,986,722	+		Sama_2484	0.76	+0.7
2,986,722	+		Sama_2484	0.76	-0.5
2,986,722	+		Sama_2484	0.76	-1.9
2,986,722	+		Sama_2484	0.76	-1.5
2,986,722	+		Sama_2484	0.76	-1.1
2,986,722	+		Sama_2484	0.76	+1.5
2,986,722	+		Sama_2484	0.76	+2.6
2,986,722	+		Sama_2484	0.76	-0.0
2,986,722	+		Sama_2484	0.76	-0.4
2,986,723	-		Sama_2484	0.76	-2.1
2,986,723	-		Sama_2484	0.76	+0.4
2,986,723	-		Sama_2484	0.76	-0.5
2,986,723	-		Sama_2484	0.76	+0.1
2,986,723	-		Sama_2484	0.76	+0.3
2,986,723	-		Sama_2484	0.76	-2.3
2,986,723	-		Sama_2484	0.76	-0.5
2,986,723	-		Sama_2484	0.76	+0.4
2,986,723	-		Sama_2484	0.76	-0.1
2,986,724	+		Sama_2484	0.76	-2.5
2,986,724	+		Sama_2484	0.76	-0.7
2,986,724	+		Sama_2484	0.76	+0.2
2,986,724	+		Sama_2484	0.76	-3.5
2,986,724	+		Sama_2484	0.76	-1.9
2,986,724	+		Sama_2484	0.76	+0.4
2,986,724	+		Sama_2484	0.76	-1.1
2,986,725	-		Sama_2484	0.76	-1.5
2,986,725	-		Sama_2484	0.76	-0.5
2,986,725	-		Sama_2484	0.76	-2.5
2,986,725	-		Sama_2484	0.76	-0.1
2,986,725	-		Sama_2484	0.76	-1.4
2,986,725	-		Sama_2484	0.76	+0.1
2,986,725	-		Sama_2484	0.76	+1.2
2,986,725	-		Sama_2484	0.76	+0.7
2,986,731	+		Sama_2484	0.76	+3.1
2,986,731	+		Sama_2484	0.76	+0.2
2,986,731	+		Sama_2484	0.76	-1.0
2,986,731	+		Sama_2484	0.76	+0.3
2,986,731	+		Sama_2484	0.76	-0.1
2,986,732	-		Sama_2484	0.76	+1.0
2,986,732	-		Sama_2484	0.76	+0.9
2,986,732	-		Sama_2484	0.76	-1.7
2,986,750	+		Sama_2484	0.77	+1.2
2,986,752	+		Sama_2484	0.77	+2.4
2,986,752	+		Sama_2484	0.77	-0.7
2,986,753	-		Sama_2484	0.78	-1.7
2,986,753	-		Sama_2484	0.78	-0.2
2,986,753	-		Sama_2484	0.78	-0.0
2,986,753	-		Sama_2484	0.78	-0.7
2,986,753	-		Sama_2484	0.78	+0.9
2,986,785	+		Sama_2484	0.79	+1.3
2,986,785	+		Sama_2484	0.79	-0.1
2,986,785	+		Sama_2484	0.79	+2.7
2,986,797	+		Sama_2484	0.80	+0.4
2,986,863	-		Sama_2484	0.83	-0.9
2,986,902	+		Sama_2484	0.85	+1.6
2,986,902	+		Sama_2484	0.85	-0.3
2,986,903	-		Sama_2484	0.86	-1.7
2,986,903	-		Sama_2484	0.86	-0.6
2,986,905	+		Sama_2484	0.86	+1.5
2,986,906	-		Sama_2484	0.86	+1.3
2,986,906	-		Sama_2484	0.86	-0.2
2,986,961	+		Sama_2484	0.89	+0.1
2,986,962	-		Sama_2484	0.89	+1.4
2,986,989	+				+1.3
2,986,989	+				-0.9
2,986,990	-				-0.1
2,987,000	+				-1.1
2,987,014	+				+1.3
2,987,014	+				+0.3
2,987,028	+				-3.2
2,987,075	+				+1.9
2,987,076	-				-0.2
2,987,080	+				+1.3
2,987,081	-				+2.9
2,987,081	-				+0.9
2,987,102	-				-1.3
2,987,113	+				+1.9
2,987,114	-				-1.2
2,987,172	+				-1.2
2,987,172	+				+1.2
2,987,259	+				-1.0
2,987,260	-				+0.5
2,987,260	-				+1.6
2,987,261	+				-0.1
2,987,261	+				+0.1
2,987,262	-				+0.4
2,987,262	-				-1.3
2,987,262	-				+0.5
2,987,262	-				+0.3
2,987,275	+				-0.3
2,987,275	+				+0.0
2,987,291	+				-0.3
2,987,292	-				-1.1
2,987,292	-				-0.5
2,987,292	-				-1.9
2,987,292	-				-2.6
2,987,295	+				+1.0
2,987,295	+				-0.1
2,987,295	+				+0.4
2,987,295	+				+1.0
2,987,296	-				-1.7
2,987,296	-				-3.1
2,987,296	-				+0.6
2,987,346	-				+1.1
2,987,407	-				+0.8
2,987,409	+				+1.1
2,987,409	+				+0.7
2,987,709	+				+1.0
2,987,761	+				-1.0
2,987,761	+				-1.3
2,987,761	+				-0.7
2,987,762	-				-1.0
2,987,762	-				-0.3
2,987,762	-				-1.1
2,987,762	-				-2.8
2,987,765	+				+1.4
2,987,765	+				-1.3
2,987,766	-				-1.5
2,987,766	-				-1.1
2,987,766	-				-3.2
2,987,766	-				-0.6
2,987,766	-				-1.7
2,987,766	-				-1.0
2,987,766	-				-0.4
2,987,766	-				-1.4
2,987,766	-				-0.0
2,987,766	-				-0.6
2,987,798	+				+0.4
2,987,799	-				+0.1
2,987,819	-		Sama_2485	0.12	-1.3
2,987,819	-		Sama_2485	0.12	-1.3
2,987,919	+		Sama_2485	0.22	-0.4
2,987,932	-		Sama_2485	0.24	-3.4
2,987,932	-		Sama_2485	0.24	-1.2
2,987,932	-		Sama_2485	0.24	-1.6
2,988,008	+		Sama_2485	0.32	-0.6
2,988,019	-		Sama_2485	0.33	-2.5
2,988,019	-		Sama_2485	0.33	-1.1
2,988,019	-		Sama_2485	0.33	-3.5
2,988,045	-		Sama_2485	0.36	-2.3
2,988,045	-		Sama_2485	0.36	-0.1
2,988,045	-		Sama_2485	0.36	-4.0
2,988,045	-		Sama_2485	0.36	-3.0
2,988,073	-		Sama_2485	0.39	-1.7
2,988,073	-		Sama_2485	0.39	+0.3
2,988,073	-		Sama_2485	0.39	-1.7
2,988,085	+		Sama_2485	0.40	-0.7
2,988,085	+		Sama_2485	0.40	-2.0
2,988,086	-		Sama_2485	0.40	-1.9
2,988,086	-		Sama_2485	0.40	-2.9
2,988,086	-		Sama_2485	0.40	-2.8
2,988,135	+		Sama_2485	0.45	-0.1
2,988,136	-		Sama_2485	0.45	+0.4
2,988,173	+		Sama_2485	0.49	-3.8