Strain Fitness in Shewanella amazonensis SB2B around Sama_1025

Experiment: L-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lactate
1,238,034	+		Sama_1023	0.88	-2.6
1,238,034	+		Sama_1023	0.88	+0.8
1,238,034	+		Sama_1023	0.88	-1.0
1,238,034	+		Sama_1023	0.88	-3.0
1,238,035	-		Sama_1023	0.88	-1.5
1,238,035	-		Sama_1023	0.88	+0.4
1,238,035	-		Sama_1023	0.88	-1.5
1,238,158	+				+2.3
1,238,158	+				+1.0
1,238,158	+				+1.3
1,238,225	+				-0.3
1,238,225	+				+0.4
1,238,269	+				+2.2
1,238,282	+				-0.3
1,238,310	+		Sama_1024	0.12	+0.7
1,238,311	-		Sama_1024	0.12	+2.0
1,238,311	-		Sama_1024	0.12	+0.8
1,238,311	-		Sama_1024	0.12	+1.5
1,238,330	+		Sama_1024	0.15	+1.6
1,238,369	+		Sama_1024	0.20	-0.7
1,238,370	-		Sama_1024	0.20	-0.2
1,238,374	+		Sama_1024	0.20	-1.0
1,238,374	+		Sama_1024	0.20	+0.3
1,238,374	+		Sama_1024	0.20	-0.1
1,238,374	+		Sama_1024	0.20	+0.6
1,238,374	+		Sama_1024	0.20	+0.8
1,238,374	+		Sama_1024	0.20	-2.6
1,238,374	+		Sama_1024	0.20	-0.7
1,238,374	+		Sama_1024	0.20	-2.2
1,238,374	+		Sama_1024	0.20	+1.1
1,238,374	+		Sama_1024	0.20	-0.7
1,238,374	+		Sama_1024	0.20	+2.4
1,238,374	+		Sama_1024	0.20	+2.0
1,238,374	+		Sama_1024	0.20	-2.2
1,238,375	-		Sama_1024	0.21	+0.1
1,238,375	-		Sama_1024	0.21	+0.2
1,238,375	-		Sama_1024	0.21	-3.3
1,238,375	-		Sama_1024	0.21	-0.5
1,238,375	-		Sama_1024	0.21	-1.0
1,238,375	-		Sama_1024	0.21	-1.3
1,238,375	-		Sama_1024	0.21	+0.8
1,238,375	-		Sama_1024	0.21	+1.4
1,238,375	-		Sama_1024	0.21	-0.0
1,238,378	+		Sama_1024	0.21	-2.3
1,238,378	+		Sama_1024	0.21	+0.7
1,238,378	+		Sama_1024	0.21	-2.5
1,238,379	-		Sama_1024	0.21	+1.4
1,238,379	-		Sama_1024	0.21	-2.2
1,238,379	-		Sama_1024	0.21	-0.5
1,238,413	+		Sama_1024	0.25	+2.2
1,238,422	+		Sama_1024	0.27	-1.5
1,238,422	+		Sama_1024	0.27	-0.4
1,238,493	+		Sama_1024	0.36	-1.2
1,238,494	-		Sama_1024	0.36	-2.2
1,238,494	-		Sama_1024	0.36	-1.0
1,238,525	+		Sama_1024	0.40	-1.3
1,238,525	+		Sama_1024	0.40	+1.2
1,238,526	-		Sama_1024	0.40	+1.0
1,238,669	+		Sama_1024	0.58	-0.5
1,238,670	-		Sama_1024	0.58	+0.3
1,238,670	-		Sama_1024	0.58	-0.2
1,238,687	+		Sama_1024	0.60	-0.2
1,238,688	-		Sama_1024	0.61	-1.2
1,238,688	-		Sama_1024	0.61	-2.2
1,238,688	-		Sama_1024	0.61	+1.7
1,238,849	-		Sama_1024	0.81	-1.7
1,238,869	+		Sama_1024	0.84	-3.5
1,238,870	-		Sama_1024	0.84	-0.1
1,238,870	-		Sama_1024	0.84	-0.2
1,238,880	+		Sama_1024	0.85	+0.2
1,238,880	+		Sama_1024	0.85	-0.5
1,238,880	+		Sama_1024	0.85	+0.3
1,238,880	+		Sama_1024	0.85	-1.5
1,238,926	+				+1.2
1,238,926	+				-0.1
1,238,926	+				+0.8
1,238,927	-				+1.7
1,238,927	-				-1.2
1,238,927	-				-1.1
1,238,994	+				+1.6
1,238,994	+				+1.3
1,238,995	-				+1.0
1,238,995	-				+0.3
1,238,995	-				-2.3
1,238,995	-				-2.2
1,238,999	+				-0.8
1,239,000	-				+0.7
1,239,000	-				+0.3
1,239,019	+				+0.2
1,239,024	+				-0.3
1,239,036	+				+1.8
1,239,036	+				-1.5
1,239,036	+				+0.0
1,239,048	+				-1.3
1,239,048	+				+0.1
1,239,049	-				-0.3
1,239,049	-				-1.5
1,239,049	-				+0.8
1,239,049	-				-0.3
1,239,049	-				+0.8
1,239,049	-				+0.6
1,239,081	+				+1.7
1,239,083	+				+2.0
1,239,083	+				+0.4
1,239,083	+				+3.0
1,239,083	+				+0.2
1,239,083	+				-0.7
1,239,083	+				-3.1
1,239,083	+				-1.8
1,239,083	+				+0.2
1,239,083	+				+0.3
1,239,083	+				-2.2
1,239,083	+				-0.2
1,239,084	-				-0.7
1,239,084	-				-1.2
1,239,084	-				-3.1
1,239,084	-				+0.8
1,239,084	-				+0.5
1,239,087	+				+0.8
1,239,087	+				+1.2
1,239,088	-				+0.8
1,239,088	-				-1.7
1,239,104	-				+0.5
1,239,139	+				-3.1
1,239,139	+				-1.7
1,239,139	+				+0.8
1,239,140	-				-1.2
1,239,140	-				-1.2
1,239,140	-				-1.3
1,239,145	+				+0.8
1,239,145	+				-1.5
1,239,145	+				-1.6
1,239,145	+				-0.7
1,239,146	-				-1.2
1,239,146	-				-0.4
1,239,154	+				-0.2
1,239,154	+				-2.6
1,239,155	-				-0.2
1,239,155	-				+0.7
1,239,155	-				+1.3
1,239,155	-				-0.6
1,239,189	-		Sama_1025	0.11	-1.2
1,239,218	+		Sama_1025	0.12	-0.4
1,239,218	+		Sama_1025	0.12	-1.2
1,239,218	+		Sama_1025	0.12	-0.5
1,239,218	+		Sama_1025	0.12	-1.5
1,239,219	-		Sama_1025	0.12	+0.4
1,239,219	-		Sama_1025	0.12	+0.8
1,239,219	-		Sama_1025	0.12	-0.3
1,239,219	-		Sama_1025	0.12	-1.6
1,239,263	-		Sama_1025	0.15	+0.3
1,239,278	+		Sama_1025	0.15	+0.3
1,239,278	+		Sama_1025	0.15	-1.0
1,239,278	+		Sama_1025	0.15	-0.3
1,239,278	+		Sama_1025	0.15	+0.5
1,239,278	+		Sama_1025	0.15	+1.6
1,239,278	+		Sama_1025	0.15	-1.5
1,239,278	+		Sama_1025	0.15	+0.6
1,239,278	+		Sama_1025	0.15	+1.5
1,239,279	-		Sama_1025	0.15	-0.7
1,239,279	-		Sama_1025	0.15	+0.3
1,239,279	-		Sama_1025	0.15	-0.2
1,239,279	-		Sama_1025	0.15	-0.2
1,239,279	-		Sama_1025	0.15	+2.1
1,239,279	-		Sama_1025	0.15	-2.0
1,239,279	-		Sama_1025	0.15	+0.4
1,239,279	-		Sama_1025	0.15	-0.9
1,239,279	-		Sama_1025	0.15	-1.2
1,239,280	+		Sama_1025	0.16	-1.7
1,239,378	+		Sama_1025	0.21	+0.6
1,239,378	+		Sama_1025	0.21	+0.9
1,239,526	+		Sama_1025	0.29	+2.1
1,239,526	+		Sama_1025	0.29	-0.7
1,239,527	-		Sama_1025	0.29	+0.5
1,239,527	-		Sama_1025	0.29	-0.7
1,239,595	-		Sama_1025	0.33	-2.3
1,239,595	-		Sama_1025	0.33	+1.5
1,239,595	-		Sama_1025	0.33	+0.1
1,239,595	-		Sama_1025	0.33	-3.0
1,239,650	+		Sama_1025	0.36	-2.6
1,239,650	+		Sama_1025	0.36	+1.8
1,239,650	+		Sama_1025	0.36	-2.3
1,239,680	-		Sama_1025	0.38	-1.3
1,239,699	+		Sama_1025	0.39	-0.3
1,239,700	-		Sama_1025	0.39	-0.5
1,239,769	+		Sama_1025	0.42	-2.2
1,239,769	+		Sama_1025	0.42	-1.0
1,239,810	+		Sama_1025	0.45	-2.5
1,239,811	-		Sama_1025	0.45	+2.4
1,239,872	+		Sama_1025	0.48	-0.9
1,239,872	+		Sama_1025	0.48	-0.7
1,239,873	-		Sama_1025	0.48	+0.8
1,239,873	-		Sama_1025	0.48	-0.7
1,239,873	-		Sama_1025	0.48	-2.3
1,239,873	-		Sama_1025	0.48	-0.8
1,239,899	+		Sama_1025	0.50	-0.2
1,239,899	+		Sama_1025	0.50	+2.0
1,239,900	-		Sama_1025	0.50	+2.6
1,239,900	-		Sama_1025	0.50	-0.7
1,239,920	+		Sama_1025	0.51	+0.4
1,239,920	+		Sama_1025	0.51	+0.2
1,239,920	+		Sama_1025	0.51	-1.0
1,239,920	+		Sama_1025	0.51	-0.2
1,239,920	+		Sama_1025	0.51	-1.4
1,239,921	-		Sama_1025	0.51	-2.2
1,239,921	-		Sama_1025	0.51	+0.1
1,239,921	-		Sama_1025	0.51	+0.9
1,239,921	-		Sama_1025	0.51	-0.2
1,239,921	-		Sama_1025	0.51	-1.3
1,239,921	-		Sama_1025	0.51	+0.7
1,239,921	-		Sama_1025	0.51	-1.5
1,239,921	-		Sama_1025	0.51	-0.6
1,239,954	+		Sama_1025	0.53	+0.8
1,239,954	+		Sama_1025	0.53	+0.5
1,239,954	+		Sama_1025	0.53	+1.1
1,239,954	+		Sama_1025	0.53	+0.6
1,239,954	+		Sama_1025	0.53	-1.5
1,239,954	+		Sama_1025	0.53	-0.2
1,239,954	+		Sama_1025	0.53	+0.5
1,239,954	+		Sama_1025	0.53	-1.0
1,239,954	+		Sama_1025	0.53	+2.4
1,239,954	+		Sama_1025	0.53	-2.9
1,239,954	+		Sama_1025	0.53	-0.4
1,239,955	-		Sama_1025	0.53	-0.7
1,239,955	-		Sama_1025	0.53	-0.7
1,239,955	-		Sama_1025	0.53	+2.2
1,239,955	-		Sama_1025	0.53	+0.5
1,239,955	-		Sama_1025	0.53	-0.2
1,239,955	-		Sama_1025	0.53	-1.0
1,239,955	-		Sama_1025	0.53	+0.2
1,239,955	-		Sama_1025	0.53	+0.3
1,239,956	+		Sama_1025	0.53	-0.1
1,239,956	+		Sama_1025	0.53	-0.7
1,239,956	+		Sama_1025	0.53	-2.0
1,239,956	+		Sama_1025	0.53	-2.0
1,239,956	+		Sama_1025	0.53	-0.5
1,239,956	+		Sama_1025	0.53	+3.5
1,239,956	+		Sama_1025	0.53	+1.8
1,239,956	+		Sama_1025	0.53	-2.5
1,239,956	+		Sama_1025	0.53	-1.0
1,239,956	+		Sama_1025	0.53	-2.0
1,239,957	-		Sama_1025	0.53	+0.2
1,239,957	-		Sama_1025	0.53	-0.6
1,239,957	-		Sama_1025	0.53	-0.2
1,239,957	-		Sama_1025	0.53	-0.3
1,239,957	-		Sama_1025	0.53	+1.4
1,239,957	-		Sama_1025	0.53	-0.8
1,240,019	+		Sama_1025	0.56	-0.0
1,240,019	+		Sama_1025	0.56	-0.7
1,240,053	+		Sama_1025	0.58	+1.6
1,240,053	+		Sama_1025	0.58	+0.3
1,240,053	+		Sama_1025	0.58	+0.2
1,240,054	-		Sama_1025	0.58	-2.6
1,240,054	-		Sama_1025	0.58	-1.7
1,240,054	-		Sama_1025	0.58	-2.2
1,240,054	-		Sama_1025	0.58	-1.6
1,240,097	+		Sama_1025	0.60	+1.7
1,240,097	+		Sama_1025	0.60	-1.2
1,240,097	+		Sama_1025	0.60	-2.5
1,240,098	-		Sama_1025	0.61	+1.8
1,240,098	-		Sama_1025	0.61	-1.5
1,240,099	+		Sama_1025	0.61	+0.1
1,240,099	+		Sama_1025	0.61	-0.9
1,240,099	+		Sama_1025	0.61	-0.6
1,240,100	-		Sama_1025	0.61	+1.7
1,240,100	-		Sama_1025	0.61	-2.6
1,240,100	-		Sama_1025	0.61	-1.9
1,240,100	-		Sama_1025	0.61	-1.2
1,240,100	-		Sama_1025	0.61	+0.0
1,240,137	+		Sama_1025	0.63	-0.9
1,240,137	+		Sama_1025	0.63	-1.6
1,240,138	-		Sama_1025	0.63	-0.2
1,240,138	-		Sama_1025	0.63	-1.5
1,240,189	+		Sama_1025	0.66	-0.1
1,240,189	+		Sama_1025	0.66	+0.3
1,240,199	-		Sama_1025	0.66	+0.5
1,240,261	-		Sama_1025	0.69	-1.5
1,240,261	-		Sama_1025	0.69	+0.3
1,240,261	-		Sama_1025	0.69	-1.5
1,240,262	+		Sama_1025	0.70	-0.7
1,240,262	+		Sama_1025	0.70	-3.7
1,240,262	+		Sama_1025	0.70	+1.1
1,240,262	+		Sama_1025	0.70	-3.3
1,240,263	-		Sama_1025	0.70	+0.7
1,240,383	+		Sama_1025	0.76	-0.7
1,240,384	-		Sama_1025	0.76	+0.2
1,240,413	+		Sama_1025	0.78	+0.2
1,240,440	+		Sama_1025	0.79	+0.6
1,240,440	+		Sama_1025	0.79	+1.3
1,240,440	+		Sama_1025	0.79	-2.1
1,240,441	-		Sama_1025	0.79	-1.1
1,240,441	-		Sama_1025	0.79	+1.3
1,240,441	-		Sama_1025	0.79	+0.1
1,240,462	+		Sama_1025	0.81	+0.3
1,240,463	-		Sama_1025	0.81	-2.5
1,240,463	-		Sama_1025	0.81	-1.0
1,240,463	-		Sama_1025	0.81	-1.0
1,240,463	-		Sama_1025	0.81	+1.8
1,240,562	+		Sama_1025	0.86	-2.0
1,240,562	+		Sama_1025	0.86	-2.3
1,240,562	+		Sama_1025	0.86	+0.3
1,240,562	+		Sama_1025	0.86	-1.3
1,240,562	+		Sama_1025	0.86	+1.2
1,240,562	+		Sama_1025	0.86	+1.4
1,240,563	-		Sama_1025	0.86	-0.7
1,240,563	-		Sama_1025	0.86	+0.1
1,240,648	+				+0.2
1,240,649	-				+1.2
1,240,649	-				+0.7
1,240,649	-				+0.8
1,240,709	+				-2.3
1,240,709	+				-0.4
1,240,710	-				+1.0
1,240,710	-				+0.3
1,240,781	+				-1.5
1,240,781	+				-1.3
1,240,781	+				-1.0
1,240,781	+				-0.1
1,240,781	+				+0.8
1,240,781	+				-0.6
1,240,782	-				+1.4
1,240,782	-				+0.8
1,240,807	-				-1.3
1,240,815	+				-2.2
1,240,815	+				-1.3
1,240,815	+				-1.6
1,240,815	+				+0.9
1,240,815	+				+2.0
1,240,815	+				-1.5
1,240,815	+				-0.0
1,240,815	+				-0.0
1,240,816	-				-2.2
1,240,816	-				+0.2
1,240,816	-				-0.0
1,240,816	-				-0.7
1,240,821	-				-2.9
1,240,869	+				-1.2
1,240,869	+				-0.5
1,240,869	+				-1.5
1,240,885	+				-0.1
1,240,886	-				+1.3
1,240,886	-				-2.5
1,240,886	-				-0.7
1,240,886	-				+0.2
1,240,966	-				-0.9
1,241,015	-				-0.4
1,241,150	+				-0.2
1,241,171	+				+1.1
1,241,171	+				-1.4
1,241,171	+				-0.5
1,241,171	+				-0.7
1,241,171	+				+2.0
1,241,171	+				-0.4
1,241,171	+				+0.6
1,241,171	+				-0.3
1,241,171	+				+2.5
1,241,172	-				-0.8
1,241,172	-				+0.8
1,241,172	-				-0.5
1,241,172	-				-0.4
1,241,172	-				-0.2
1,241,172	-				-1.7
1,241,172	-				-0.7
1,241,252	+		Sama_1026	0.14	+0.3
1,241,252	+		Sama_1026	0.14	-0.4
1,241,253	-		Sama_1026	0.14	-0.7
1,241,504	+		Sama_1026	0.29	+0.3
1,241,504	+		Sama_1026	0.29	-0.4
1,241,505	-		Sama_1026	0.30	-0.5
1,241,505	-		Sama_1026	0.30	-0.2
1,241,549	+		Sama_1026	0.32	+0.6
1,241,567	-		Sama_1026	0.33	-1.0
1,241,608	+		Sama_1026	0.36	-0.1
1,241,608	+		Sama_1026	0.36	+0.0
1,241,608	+		Sama_1026	0.36	-3.0
1,241,608	+		Sama_1026	0.36	+1.2
1,241,608	+		Sama_1026	0.36	-1.5
1,241,780	-		Sama_1026	0.46	-1.5