Experiment: m.b. Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_883 and HP15_884 are separated by 38 nucleotides HP15_884 and HP15_885 are separated by 2 nucleotides HP15_885 and HP15_886 are separated by 27 nucleotides HP15_886 and HP15_887 are separated by 23 nucleotides HP15_887 and HP15_888 are separated by 6 nucleotides HP15_888 and HP15_889 are separated by 47 nucleotides
HP15_883: HP15_883 - conserved hypothetical protein, at 899,747 to 901,204
_883
HP15_884: HP15_884 - outer membrane lipoprotein, at 901,243 to 901,425
_884
HP15_885: HP15_885 - uncharacterized conserved protein, at 901,428 to 901,799
_885
HP15_886: HP15_886 - pseudouridine synthase family 1 protein, at 901,827 to 902,765
_886
HP15_887: HP15_887 - hypothetical protein, at 902,789 to 902,893
_887
HP15_888: HP15_888 - conserved hypothetical protein, membrane, at 902,900 to 903,295
_888
HP15_889: HP15_889 - cobalamin synthesis protein/P47K family protein, at 903,343 to 904,329
_889
Position (kb) 901
902
903 Strain fitness (log2 ratio) -2
-1
0
1 at 900.971 kb on + strand, within HP15_883 at 901.003 kb on + strand, within HP15_883 at 901.017 kb on - strand, within HP15_883 at 901.116 kb on - strand at 901.529 kb on + strand, within HP15_885 at 901.938 kb on + strand, within HP15_886 at 902.062 kb on + strand, within HP15_886 at 902.299 kb on + strand, within HP15_886 at 902.305 kb on + strand, within HP15_886 at 902.305 kb on + strand, within HP15_886 at 902.307 kb on - strand, within HP15_886 at 902.313 kb on - strand, within HP15_886 at 902.360 kb on - strand, within HP15_886 at 902.490 kb on + strand, within HP15_886 at 902.542 kb on + strand, within HP15_886 at 902.555 kb on - strand, within HP15_886 at 902.606 kb on + strand, within HP15_886 at 902.942 kb on + strand, within HP15_888 at 903.265 kb on + strand at 903.451 kb on + strand, within HP15_889 at 903.488 kb on + strand, within HP15_889 at 903.669 kb on - strand, within HP15_889
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.016 mg/ml remove 900,971 + HP15_883 0.84 +0.1 901,003 + HP15_883 0.86 -0.1 901,017 - HP15_883 0.87 -0.1 901,116 - +0.6 901,529 + HP15_885 0.27 -1.8 901,938 + HP15_886 0.12 -0.3 902,062 + HP15_886 0.25 -0.2 902,299 + HP15_886 0.50 -0.2 902,305 + HP15_886 0.51 -1.6 902,305 + HP15_886 0.51 +1.3 902,307 - HP15_886 0.51 +1.0 902,313 - HP15_886 0.52 +0.8 902,360 - HP15_886 0.57 -0.2 902,490 + HP15_886 0.71 -0.0 902,542 + HP15_886 0.76 +1.0 902,555 - HP15_886 0.78 -1.0 902,606 + HP15_886 0.83 +0.2 902,942 + HP15_888 0.11 -1.9 903,265 + -0.6 903,451 + HP15_889 0.11 +0.0 903,488 + HP15_889 0.15 +0.8 903,669 - HP15_889 0.33 +0.1
Or see this region's nucleotide sequence