Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4313 and Psest_4314 are separated by 264 nucleotides Psest_4314 and Psest_4315 overlap by 1 nucleotides Psest_4315 and Psest_4316 are separated by 58 nucleotides
Psest_4313: Psest_4313 - Catalase, at 4,511,894 to 4,514,029
_4313
Psest_4314: Psest_4314 - ABC-type metal ion transport system, ATPase component, at 4,514,294 to 4,515,301
_4314
Psest_4315: Psest_4315 - ABC-type metal ion transport system, permease component, at 4,515,301 to 4,515,978
_4315
Psest_4316: Psest_4316 - ABC-type metal ion transport system, periplasmic component/surface antigen, at 4,516,037 to 4,516,807
_4316
Position (kb)
4514
4515
4516 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4513.321 kb on + strand, within Psest_4313 at 4513.321 kb on + strand, within Psest_4313 at 4513.321 kb on + strand, within Psest_4313 at 4513.321 kb on + strand, within Psest_4313 at 4513.321 kb on + strand, within Psest_4313 at 4513.321 kb on + strand, within Psest_4313 at 4513.321 kb on + strand, within Psest_4313 at 4513.321 kb on + strand, within Psest_4313 at 4513.321 kb on + strand, within Psest_4313 at 4513.321 kb on + strand, within Psest_4313 at 4513.321 kb on + strand, within Psest_4313 at 4513.322 kb on - strand, within Psest_4313 at 4513.322 kb on - strand, within Psest_4313 at 4513.322 kb on - strand, within Psest_4313 at 4513.322 kb on - strand, within Psest_4313 at 4513.322 kb on - strand, within Psest_4313 at 4513.322 kb on - strand, within Psest_4313 at 4513.322 kb on - strand, within Psest_4313 at 4513.322 kb on - strand, within Psest_4313 at 4513.322 kb on - strand, within Psest_4313 at 4513.726 kb on - strand, within Psest_4313 at 4514.043 kb on + strand at 4514.170 kb on + strand at 4514.170 kb on + strand at 4514.171 kb on - strand at 4514.172 kb on + strand at 4514.172 kb on + strand at 4514.172 kb on + strand at 4514.173 kb on - strand at 4514.173 kb on - strand at 4514.233 kb on + strand at 4514.705 kb on + strand, within Psest_4314 at 4515.116 kb on + strand, within Psest_4314 at 4515.116 kb on + strand, within Psest_4314 at 4515.116 kb on + strand, within Psest_4314 at 4515.116 kb on + strand, within Psest_4314 at 4515.116 kb on + strand, within Psest_4314 at 4515.116 kb on + strand, within Psest_4314 at 4515.117 kb on - strand, within Psest_4314 at 4515.117 kb on - strand, within Psest_4314 at 4515.117 kb on - strand, within Psest_4314 at 4515.117 kb on - strand, within Psest_4314 at 4515.117 kb on - strand, within Psest_4314 at 4515.117 kb on - strand, within Psest_4314 at 4515.117 kb on - strand, within Psest_4314 at 4515.161 kb on + strand, within Psest_4314 at 4515.162 kb on - strand, within Psest_4314 at 4515.207 kb on - strand at 4515.315 kb on + strand at 4515.315 kb on + strand at 4515.316 kb on - strand at 4515.481 kb on + strand, within Psest_4315 at 4515.481 kb on + strand, within Psest_4315 at 4515.668 kb on + strand, within Psest_4315 at 4515.668 kb on + strand, within Psest_4315 at 4515.668 kb on + strand, within Psest_4315 at 4515.802 kb on + strand, within Psest_4315 at 4515.803 kb on - strand, within Psest_4315 at 4515.803 kb on - strand, within Psest_4315 at 4515.976 kb on + strand at 4515.976 kb on + strand at 4516.202 kb on + strand, within Psest_4316 at 4516.202 kb on + strand, within Psest_4316 at 4516.203 kb on - strand, within Psest_4316 at 4516.203 kb on - strand, within Psest_4316 at 4516.268 kb on + strand, within Psest_4316
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 4,513,321 + Psest_4313 0.67 +1.3 4,513,321 + Psest_4313 0.67 +0.0 4,513,321 + Psest_4313 0.67 +0.6 4,513,321 + Psest_4313 0.67 -2.0 4,513,321 + Psest_4313 0.67 -0.5 4,513,321 + Psest_4313 0.67 -1.1 4,513,321 + Psest_4313 0.67 +0.3 4,513,321 + Psest_4313 0.67 +0.2 4,513,321 + Psest_4313 0.67 +0.5 4,513,321 + Psest_4313 0.67 +0.6 4,513,321 + Psest_4313 0.67 +1.3 4,513,322 - Psest_4313 0.67 +0.1 4,513,322 - Psest_4313 0.67 +0.3 4,513,322 - Psest_4313 0.67 -0.3 4,513,322 - Psest_4313 0.67 +0.5 4,513,322 - Psest_4313 0.67 -0.1 4,513,322 - Psest_4313 0.67 -0.1 4,513,322 - Psest_4313 0.67 +0.2 4,513,322 - Psest_4313 0.67 -0.1 4,513,322 - Psest_4313 0.67 -2.4 4,513,726 - Psest_4313 0.86 +1.3 4,514,043 + +1.3 4,514,170 + +0.9 4,514,170 + +1.3 4,514,171 - +1.6 4,514,172 + -2.0 4,514,172 + +0.3 4,514,172 + +1.2 4,514,173 - -1.4 4,514,173 - +1.8 4,514,233 + +1.6 4,514,705 + Psest_4314 0.41 +0.8 4,515,116 + Psest_4314 0.82 +1.7 4,515,116 + Psest_4314 0.82 +0.6 4,515,116 + Psest_4314 0.82 +1.9 4,515,116 + Psest_4314 0.82 +0.9 4,515,116 + Psest_4314 0.82 +0.3 4,515,116 + Psest_4314 0.82 +1.3 4,515,117 - Psest_4314 0.82 +0.5 4,515,117 - Psest_4314 0.82 +0.5 4,515,117 - Psest_4314 0.82 +2.1 4,515,117 - Psest_4314 0.82 +1.2 4,515,117 - Psest_4314 0.82 +0.2 4,515,117 - Psest_4314 0.82 +2.8 4,515,117 - Psest_4314 0.82 +0.9 4,515,161 + Psest_4314 0.86 +1.2 4,515,162 - Psest_4314 0.86 -0.7 4,515,207 - +0.3 4,515,315 + +0.8 4,515,315 + +2.2 4,515,316 - -0.2 4,515,481 + Psest_4315 0.27 +1.5 4,515,481 + Psest_4315 0.27 +0.1 4,515,668 + Psest_4315 0.54 +0.5 4,515,668 + Psest_4315 0.54 +1.9 4,515,668 + Psest_4315 0.54 +2.1 4,515,802 + Psest_4315 0.74 -0.5 4,515,803 - Psest_4315 0.74 +1.2 4,515,803 - Psest_4315 0.74 +2.2 4,515,976 + +1.1 4,515,976 + +1.0 4,516,202 + Psest_4316 0.21 +0.3 4,516,202 + Psest_4316 0.21 +0.8 4,516,203 - Psest_4316 0.22 +0.6 4,516,203 - Psest_4316 0.22 +2.1 4,516,268 + Psest_4316 0.30 +1.3
Or see this region's nucleotide sequence