Strain Fitness in Marinobacter adhaerens HP15 around HP15_4122

Experiment: m.b. Thallium(I) acetate 0.016 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_4121 and HP15_4122 are separated by 109 nucleotidesHP15_4122 and HP15_4123 overlap by 1 nucleotidesHP15_4123 and HP15_4124 are separated by 197 nucleotides HP15_4121: HP15_4121 - cytoplasmic chaperone TorD family protein, at 4,357,650 to 4,358,261 _4121 HP15_4122: HP15_4122 - conserved hypothetical protein, at 4,358,371 to 4,358,997 _4122 HP15_4123: HP15_4123 - molybdopterin-guanine dinucleotide biosynthesis protein A, at 4,358,997 to 4,359,587 _4123 HP15_4124: HP15_4124 - protein containing 4Fe-4S ferredoxin, iron-sulfur binding, subgroup domains, at 4,359,785 to 4,361,698 _4124 Position (kb) 4358 4359Strain fitness (log2 ratio) -2 -1 0 1 2at 4357.385 kb on - strandat 4357.385 kb on - strandat 4357.412 kb on - strandat 4357.440 kb on + strandat 4357.460 kb on - strandat 4357.485 kb on + strandat 4357.493 kb on - strandat 4357.637 kb on - strandat 4357.865 kb on + strand, within HP15_4121at 4357.992 kb on + strand, within HP15_4121at 4358.057 kb on + strand, within HP15_4121at 4358.426 kb on - strandat 4358.436 kb on - strand, within HP15_4122at 4358.490 kb on + strand, within HP15_4122at 4358.490 kb on + strand, within HP15_4122at 4358.498 kb on - strand, within HP15_4122at 4358.533 kb on - strand, within HP15_4122at 4358.630 kb on - strand, within HP15_4122at 4358.630 kb on - strand, within HP15_4122at 4358.678 kb on - strand, within HP15_4122at 4358.680 kb on - strand, within HP15_4122at 4358.699 kb on - strand, within HP15_4122at 4358.748 kb on - strand, within HP15_4122at 4358.748 kb on - strand, within HP15_4122at 4358.806 kb on - strand, within HP15_4122at 4358.875 kb on - strand, within HP15_4122at 4358.925 kb on - strand, within HP15_4122at 4358.925 kb on - strand, within HP15_4122at 4358.951 kb on + strandat 4359.158 kb on + strand, within HP15_4123at 4359.225 kb on - strand, within HP15_4123at 4359.339 kb on - strand, within HP15_4123at 4359.391 kb on - strand, within HP15_4123at 4359.426 kb on + strand, within HP15_4123at 4359.552 kb on + strandat 4359.555 kb on - strandat 4359.557 kb on + strandat 4359.565 kb on - strandat 4359.565 kb on - strandat 4359.723 kb on + strandat 4359.761 kb on + strandat 4359.850 kb on - strandat 4359.983 kb on - strand, within HP15_4124

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.016 mg/ml
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4,357,385 - -0.3
4,357,385 - -0.2
4,357,412 - +0.1
4,357,440 + +0.2
4,357,460 - -2.2
4,357,485 + +1.4
4,357,493 - +0.6
4,357,637 - -0.3
4,357,865 + HP15_4121 0.35 +0.4
4,357,992 + HP15_4121 0.56 -0.0
4,358,057 + HP15_4121 0.67 +0.3
4,358,426 - -0.5
4,358,436 - HP15_4122 0.10 +0.2
4,358,490 + HP15_4122 0.19 -0.3
4,358,490 + HP15_4122 0.19 +0.2
4,358,498 - HP15_4122 0.20 +1.1
4,358,533 - HP15_4122 0.26 +1.0
4,358,630 - HP15_4122 0.41 +2.6
4,358,630 - HP15_4122 0.41 +0.8
4,358,678 - HP15_4122 0.49 +1.8
4,358,680 - HP15_4122 0.49 +1.4
4,358,699 - HP15_4122 0.52 +0.7
4,358,748 - HP15_4122 0.60 +0.4
4,358,748 - HP15_4122 0.60 +1.5
4,358,806 - HP15_4122 0.69 -0.0
4,358,875 - HP15_4122 0.80 -0.3
4,358,925 - HP15_4122 0.88 +0.3
4,358,925 - HP15_4122 0.88 +0.4
4,358,951 + -0.7
4,359,158 + HP15_4123 0.27 -0.6
4,359,225 - HP15_4123 0.39 +0.0
4,359,339 - HP15_4123 0.58 +0.9
4,359,391 - HP15_4123 0.67 +1.0
4,359,426 + HP15_4123 0.73 -0.0
4,359,552 + -1.3
4,359,555 - -0.5
4,359,557 + +0.6
4,359,565 - +0.2
4,359,565 - +1.0
4,359,723 + -0.6
4,359,761 + +1.8
4,359,850 - +0.2
4,359,983 - HP15_4124 0.10 +0.0

Or see this region's nucleotide sequence