Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4141 and Psest_4142 are separated by 11 nucleotides Psest_4142 and Psest_4143 are separated by 16 nucleotides Psest_4143 and Psest_4144 are separated by 37 nucleotides
Psest_4141: Psest_4141 - 3-carboxymuconate cyclase, at 4,324,135 to 4,325,328
_4141
Psest_4142: Psest_4142 - hypothetical protein, at 4,325,340 to 4,326,377
_4142
Psest_4143: Psest_4143 - flagellar hook-associated protein 3, at 4,326,394 to 4,327,302
_4143
Psest_4144: Psest_4144 - flagellar hook-associated protein FlgK, at 4,327,340 to 4,328,719
_4144
Position (kb)
4325
4326
4327 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4324.402 kb on + strand, within Psest_4141 at 4324.473 kb on + strand, within Psest_4141 at 4324.473 kb on + strand, within Psest_4141 at 4324.474 kb on - strand, within Psest_4141 at 4324.474 kb on - strand, within Psest_4141 at 4324.573 kb on + strand, within Psest_4141 at 4324.573 kb on + strand, within Psest_4141 at 4324.573 kb on + strand, within Psest_4141 at 4324.574 kb on - strand, within Psest_4141 at 4324.574 kb on - strand, within Psest_4141 at 4324.903 kb on + strand, within Psest_4141 at 4324.903 kb on + strand, within Psest_4141 at 4324.945 kb on + strand, within Psest_4141 at 4324.946 kb on - strand, within Psest_4141 at 4324.946 kb on - strand, within Psest_4141 at 4325.031 kb on + strand, within Psest_4141 at 4325.031 kb on + strand, within Psest_4141 at 4325.031 kb on + strand, within Psest_4141 at 4325.031 kb on + strand, within Psest_4141 at 4325.032 kb on - strand, within Psest_4141 at 4325.032 kb on - strand, within Psest_4141 at 4325.032 kb on - strand, within Psest_4141 at 4325.056 kb on + strand, within Psest_4141 at 4325.056 kb on + strand, within Psest_4141 at 4325.056 kb on + strand, within Psest_4141 at 4325.056 kb on + strand, within Psest_4141 at 4325.056 kb on + strand, within Psest_4141 at 4325.056 kb on + strand, within Psest_4141 at 4325.056 kb on + strand, within Psest_4141 at 4325.056 kb on + strand, within Psest_4141 at 4325.057 kb on - strand, within Psest_4141 at 4325.057 kb on - strand, within Psest_4141 at 4325.057 kb on - strand, within Psest_4141 at 4325.057 kb on - strand, within Psest_4141 at 4325.057 kb on - strand, within Psest_4141 at 4325.057 kb on - strand, within Psest_4141 at 4325.057 kb on - strand, within Psest_4141 at 4325.057 kb on - strand, within Psest_4141 at 4325.057 kb on - strand, within Psest_4141 at 4325.057 kb on - strand, within Psest_4141 at 4325.536 kb on - strand, within Psest_4142 at 4326.078 kb on - strand, within Psest_4142 at 4326.173 kb on - strand, within Psest_4142 at 4326.396 kb on - strand at 4326.434 kb on + strand at 4326.434 kb on + strand at 4326.434 kb on + strand at 4326.434 kb on + strand at 4326.434 kb on + strand at 4326.434 kb on + strand at 4326.434 kb on + strand at 4326.435 kb on - strand at 4326.435 kb on - strand at 4326.435 kb on - strand at 4326.435 kb on - strand at 4326.435 kb on - strand at 4326.435 kb on - strand at 4326.467 kb on + strand at 4326.467 kb on + strand at 4326.468 kb on - strand at 4326.468 kb on - strand at 4326.497 kb on + strand, within Psest_4143 at 4326.497 kb on + strand, within Psest_4143 at 4326.497 kb on + strand, within Psest_4143 at 4326.497 kb on + strand, within Psest_4143 at 4326.497 kb on + strand, within Psest_4143 at 4326.498 kb on - strand, within Psest_4143 at 4326.845 kb on + strand, within Psest_4143 at 4326.845 kb on + strand, within Psest_4143 at 4326.845 kb on + strand, within Psest_4143 at 4326.845 kb on + strand, within Psest_4143 at 4326.845 kb on + strand, within Psest_4143 at 4326.845 kb on + strand, within Psest_4143 at 4326.845 kb on + strand, within Psest_4143 at 4326.845 kb on + strand, within Psest_4143 at 4326.845 kb on + strand, within Psest_4143 at 4326.846 kb on - strand, within Psest_4143 at 4326.846 kb on - strand, within Psest_4143 at 4326.846 kb on - strand, within Psest_4143 at 4326.846 kb on - strand, within Psest_4143 at 4326.846 kb on - strand, within Psest_4143 at 4326.846 kb on - strand, within Psest_4143 at 4326.846 kb on - strand, within Psest_4143 at 4326.846 kb on - strand, within Psest_4143 at 4326.846 kb on - strand, within Psest_4143 at 4326.846 kb on - strand, within Psest_4143 at 4326.846 kb on - strand, within Psest_4143 at 4326.849 kb on + strand, within Psest_4143 at 4326.849 kb on + strand, within Psest_4143 at 4326.849 kb on + strand, within Psest_4143 at 4326.849 kb on + strand, within Psest_4143 at 4326.849 kb on + strand, within Psest_4143 at 4326.850 kb on - strand, within Psest_4143 at 4326.850 kb on - strand, within Psest_4143 at 4327.105 kb on + strand, within Psest_4143 at 4327.105 kb on + strand, within Psest_4143 at 4327.105 kb on + strand, within Psest_4143 at 4327.105 kb on + strand, within Psest_4143 at 4327.105 kb on + strand, within Psest_4143 at 4327.106 kb on - strand, within Psest_4143 at 4327.106 kb on - strand, within Psest_4143 at 4327.106 kb on - strand, within Psest_4143 at 4327.106 kb on - strand, within Psest_4143 at 4327.106 kb on - strand, within Psest_4143 at 4327.106 kb on - strand, within Psest_4143 at 4327.106 kb on - strand, within Psest_4143
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 4,324,402 + Psest_4141 0.22 +0.1 4,324,473 + Psest_4141 0.28 +0.0 4,324,473 + Psest_4141 0.28 +1.4 4,324,474 - Psest_4141 0.28 +0.4 4,324,474 - Psest_4141 0.28 +0.0 4,324,573 + Psest_4141 0.37 +0.7 4,324,573 + Psest_4141 0.37 +1.1 4,324,573 + Psest_4141 0.37 +0.8 4,324,574 - Psest_4141 0.37 -0.7 4,324,574 - Psest_4141 0.37 -0.3 4,324,903 + Psest_4141 0.64 +0.0 4,324,903 + Psest_4141 0.64 -0.1 4,324,945 + Psest_4141 0.68 +0.7 4,324,946 - Psest_4141 0.68 +2.2 4,324,946 - Psest_4141 0.68 -0.5 4,325,031 + Psest_4141 0.75 -0.6 4,325,031 + Psest_4141 0.75 -1.6 4,325,031 + Psest_4141 0.75 -0.0 4,325,031 + Psest_4141 0.75 -0.2 4,325,032 - Psest_4141 0.75 +0.4 4,325,032 - Psest_4141 0.75 +0.0 4,325,032 - Psest_4141 0.75 +1.0 4,325,056 + Psest_4141 0.77 +0.8 4,325,056 + Psest_4141 0.77 -0.6 4,325,056 + Psest_4141 0.77 +1.8 4,325,056 + Psest_4141 0.77 +1.2 4,325,056 + Psest_4141 0.77 +0.1 4,325,056 + Psest_4141 0.77 -0.5 4,325,056 + Psest_4141 0.77 -2.0 4,325,056 + Psest_4141 0.77 +1.4 4,325,057 - Psest_4141 0.77 -0.1 4,325,057 - Psest_4141 0.77 -0.1 4,325,057 - Psest_4141 0.77 +1.1 4,325,057 - Psest_4141 0.77 -1.2 4,325,057 - Psest_4141 0.77 +1.8 4,325,057 - Psest_4141 0.77 +0.2 4,325,057 - Psest_4141 0.77 +0.1 4,325,057 - Psest_4141 0.77 +0.8 4,325,057 - Psest_4141 0.77 +0.2 4,325,057 - Psest_4141 0.77 +1.7 4,325,536 - Psest_4142 0.19 +0.9 4,326,078 - Psest_4142 0.71 -1.0 4,326,173 - Psest_4142 0.80 +1.1 4,326,396 - +0.4 4,326,434 + +0.5 4,326,434 + +0.8 4,326,434 + -1.3 4,326,434 + -0.6 4,326,434 + +0.4 4,326,434 + -1.0 4,326,434 + -0.0 4,326,435 - -0.6 4,326,435 - -0.5 4,326,435 - +0.2 4,326,435 - +1.1 4,326,435 - +0.2 4,326,435 - -0.6 4,326,467 + +1.4 4,326,467 + -1.6 4,326,468 - +0.9 4,326,468 - +0.2 4,326,497 + Psest_4143 0.11 -0.6 4,326,497 + Psest_4143 0.11 +0.1 4,326,497 + Psest_4143 0.11 -0.5 4,326,497 + Psest_4143 0.11 +0.5 4,326,497 + Psest_4143 0.11 +0.8 4,326,498 - Psest_4143 0.11 +0.9 4,326,845 + Psest_4143 0.50 +1.4 4,326,845 + Psest_4143 0.50 +0.1 4,326,845 + Psest_4143 0.50 -0.0 4,326,845 + Psest_4143 0.50 +0.4 4,326,845 + Psest_4143 0.50 +0.4 4,326,845 + Psest_4143 0.50 +2.7 4,326,845 + Psest_4143 0.50 +1.9 4,326,845 + Psest_4143 0.50 +0.4 4,326,845 + Psest_4143 0.50 +0.9 4,326,846 - Psest_4143 0.50 +0.7 4,326,846 - Psest_4143 0.50 -1.6 4,326,846 - Psest_4143 0.50 -1.0 4,326,846 - Psest_4143 0.50 -0.5 4,326,846 - Psest_4143 0.50 +1.9 4,326,846 - Psest_4143 0.50 -0.1 4,326,846 - Psest_4143 0.50 +0.3 4,326,846 - Psest_4143 0.50 +1.8 4,326,846 - Psest_4143 0.50 +0.2 4,326,846 - Psest_4143 0.50 +1.1 4,326,846 - Psest_4143 0.50 +0.4 4,326,849 + Psest_4143 0.50 +2.4 4,326,849 + Psest_4143 0.50 +0.2 4,326,849 + Psest_4143 0.50 +0.9 4,326,849 + Psest_4143 0.50 -0.3 4,326,849 + Psest_4143 0.50 -0.1 4,326,850 - Psest_4143 0.50 +1.4 4,326,850 - Psest_4143 0.50 -0.5 4,327,105 + Psest_4143 0.78 -0.5 4,327,105 + Psest_4143 0.78 -0.6 4,327,105 + Psest_4143 0.78 +0.0 4,327,105 + Psest_4143 0.78 -0.2 4,327,105 + Psest_4143 0.78 +0.4 4,327,106 - Psest_4143 0.78 +0.8 4,327,106 - Psest_4143 0.78 -0.5 4,327,106 - Psest_4143 0.78 -0.0 4,327,106 - Psest_4143 0.78 +0.4 4,327,106 - Psest_4143 0.78 +1.4 4,327,106 - Psest_4143 0.78 +2.2 4,327,106 - Psest_4143 0.78 -1.1
Or see this region's nucleotide sequence