Experiment: m.b. Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3951 and HP15_3952 are separated by 279 nucleotides HP15_3952 and HP15_3953 are separated by 87 nucleotides
HP15_3951: HP15_3951 - signal-transduction protein, at 4,181,222 to 4,183,096
_3951
HP15_3952: HP15_3952 - hypothetical protein, at 4,183,376 to 4,183,489
_3952
HP15_3953: HP15_3953 - outer membrane receptor for transport of vitamin B, at 4,183,577 to 4,185,415
_3953
Position (kb)
4183
4184 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 4182.460 kb on - strand, within HP15_3951 at 4182.469 kb on + strand, within HP15_3951 at 4182.477 kb on - strand, within HP15_3951 at 4182.485 kb on - strand, within HP15_3951 at 4182.493 kb on + strand, within HP15_3951 at 4182.512 kb on - strand, within HP15_3951 at 4182.642 kb on + strand, within HP15_3951 at 4182.643 kb on + strand, within HP15_3951 at 4182.651 kb on - strand, within HP15_3951 at 4182.651 kb on - strand, within HP15_3951 at 4182.849 kb on - strand, within HP15_3951 at 4182.865 kb on - strand, within HP15_3951 at 4182.878 kb on + strand, within HP15_3951 at 4182.914 kb on - strand at 4182.958 kb on + strand at 4182.978 kb on + strand at 4183.024 kb on - strand at 4183.093 kb on + strand at 4183.115 kb on - strand at 4183.166 kb on - strand at 4183.184 kb on - strand at 4183.211 kb on + strand at 4183.345 kb on - strand at 4183.493 kb on - strand at 4183.493 kb on - strand at 4183.557 kb on - strand at 4183.671 kb on + strand at 4183.671 kb on + strand at 4183.671 kb on + strand at 4183.679 kb on - strand at 4183.679 kb on - strand at 4183.679 kb on - strand at 4183.713 kb on + strand at 4183.819 kb on - strand, within HP15_3953 at 4184.005 kb on + strand, within HP15_3953 at 4184.082 kb on - strand, within HP15_3953 at 4184.143 kb on + strand, within HP15_3953 at 4184.164 kb on - strand, within HP15_3953 at 4184.288 kb on - strand, within HP15_3953 at 4184.310 kb on - strand, within HP15_3953 at 4184.316 kb on - strand, within HP15_3953 at 4184.434 kb on - strand, within HP15_3953 at 4184.448 kb on - strand, within HP15_3953
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.016 mg/ml remove 4,182,460 - HP15_3951 0.66 -1.2 4,182,469 + HP15_3951 0.67 -1.6 4,182,477 - HP15_3951 0.67 -1.2 4,182,485 - HP15_3951 0.67 -0.2 4,182,493 + HP15_3951 0.68 -1.7 4,182,512 - HP15_3951 0.69 -1.6 4,182,642 + HP15_3951 0.76 -0.3 4,182,643 + HP15_3951 0.76 +0.9 4,182,651 - HP15_3951 0.76 -1.0 4,182,651 - HP15_3951 0.76 -1.1 4,182,849 - HP15_3951 0.87 -0.4 4,182,865 - HP15_3951 0.88 +0.3 4,182,878 + HP15_3951 0.88 -0.3 4,182,914 - +0.1 4,182,958 + -0.6 4,182,978 + -1.1 4,183,024 - -0.5 4,183,093 + -0.7 4,183,115 - -0.5 4,183,166 - +0.7 4,183,184 - +1.6 4,183,211 + -0.1 4,183,345 - -2.1 4,183,493 - -1.2 4,183,493 - -1.0 4,183,557 - -1.0 4,183,671 + -2.0 4,183,671 + +0.3 4,183,671 + -1.8 4,183,679 - -2.7 4,183,679 - -2.6 4,183,679 - -2.7 4,183,713 + -0.6 4,183,819 - HP15_3953 0.13 -2.0 4,184,005 + HP15_3953 0.23 -1.9 4,184,082 - HP15_3953 0.27 -1.2 4,184,143 + HP15_3953 0.31 -2.9 4,184,164 - HP15_3953 0.32 -0.8 4,184,288 - HP15_3953 0.39 -1.2 4,184,310 - HP15_3953 0.40 -1.7 4,184,316 - HP15_3953 0.40 -2.5 4,184,434 - HP15_3953 0.47 -1.6 4,184,448 - HP15_3953 0.47 -4.0
Or see this region's nucleotide sequence