Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4077 and Psest_4078 are separated by 100 nucleotides Psest_4078 and Psest_4079 are separated by 124 nucleotides Psest_4079 and Psest_4080 are separated by 16 nucleotides
Psest_4077: Psest_4077 - amino acid carrier protein, at 4,252,578 to 4,253,999
_4077
Psest_4078: Psest_4078 - L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D, at 4,254,100 to 4,255,083
_4078
Psest_4079: Psest_4079 - ABC-type amino acid transport/signal transduction systems, periplasmic component/domain, at 4,255,208 to 4,256,017
_4079
Psest_4080: Psest_4080 - Carbonic anhydrase, at 4,256,034 to 4,256,732
_4080
Position (kb)
4254
4255
4256 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 4253.212 kb on - strand, within Psest_4077 at 4253.520 kb on + strand, within Psest_4077 at 4253.521 kb on - strand, within Psest_4077 at 4253.646 kb on + strand, within Psest_4077 at 4253.646 kb on + strand, within Psest_4077 at 4253.646 kb on + strand, within Psest_4077 at 4253.646 kb on + strand, within Psest_4077 at 4253.646 kb on + strand, within Psest_4077 at 4253.646 kb on + strand, within Psest_4077 at 4253.646 kb on + strand, within Psest_4077 at 4253.646 kb on + strand, within Psest_4077 at 4253.647 kb on - strand, within Psest_4077 at 4253.647 kb on - strand, within Psest_4077 at 4253.647 kb on - strand, within Psest_4077 at 4253.647 kb on - strand, within Psest_4077 at 4253.652 kb on + strand, within Psest_4077 at 4253.652 kb on + strand, within Psest_4077 at 4253.652 kb on + strand, within Psest_4077 at 4253.653 kb on - strand, within Psest_4077 at 4253.653 kb on - strand, within Psest_4077 at 4253.653 kb on - strand, within Psest_4077 at 4253.653 kb on - strand, within Psest_4077 at 4253.653 kb on - strand, within Psest_4077 at 4253.653 kb on - strand, within Psest_4077 at 4253.653 kb on - strand, within Psest_4077 at 4253.653 kb on - strand, within Psest_4077 at 4253.653 kb on - strand, within Psest_4077 at 4253.655 kb on + strand, within Psest_4077 at 4253.655 kb on + strand, within Psest_4077 at 4253.656 kb on - strand, within Psest_4077 at 4253.656 kb on - strand, within Psest_4077 at 4253.656 kb on - strand, within Psest_4077 at 4253.656 kb on - strand, within Psest_4077 at 4253.712 kb on + strand, within Psest_4077 at 4253.712 kb on + strand, within Psest_4077 at 4253.713 kb on - strand, within Psest_4077 at 4253.713 kb on - strand, within Psest_4077 at 4253.868 kb on + strand at 4253.869 kb on - strand at 4254.040 kb on - strand at 4254.093 kb on + strand at 4254.093 kb on + strand at 4254.134 kb on - strand at 4254.394 kb on + strand, within Psest_4078 at 4254.794 kb on - strand, within Psest_4078 at 4254.918 kb on - strand, within Psest_4078 at 4254.919 kb on + strand, within Psest_4078 at 4254.920 kb on - strand, within Psest_4078 at 4254.920 kb on - strand, within Psest_4078 at 4255.170 kb on + strand at 4255.171 kb on - strand at 4255.181 kb on + strand at 4255.182 kb on - strand at 4255.182 kb on - strand at 4255.260 kb on + strand at 4255.260 kb on + strand at 4255.261 kb on - strand at 4255.261 kb on - strand at 4255.261 kb on - strand at 4255.261 kb on - strand at 4255.292 kb on + strand, within Psest_4079 at 4255.292 kb on + strand, within Psest_4079 at 4255.292 kb on + strand, within Psest_4079 at 4255.293 kb on - strand, within Psest_4079 at 4255.306 kb on - strand, within Psest_4079 at 4255.405 kb on + strand, within Psest_4079 at 4255.430 kb on + strand, within Psest_4079 at 4255.430 kb on + strand, within Psest_4079 at 4255.431 kb on - strand, within Psest_4079 at 4255.431 kb on - strand, within Psest_4079 at 4255.466 kb on + strand, within Psest_4079 at 4255.467 kb on - strand, within Psest_4079 at 4255.467 kb on - strand, within Psest_4079 at 4255.859 kb on + strand, within Psest_4079 at 4255.879 kb on + strand, within Psest_4079 at 4255.879 kb on + strand, within Psest_4079 at 4255.880 kb on - strand, within Psest_4079 at 4255.880 kb on - strand, within Psest_4079 at 4255.973 kb on + strand at 4255.973 kb on + strand at 4255.973 kb on + strand at 4256.047 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 4,253,212 - Psest_4077 0.45 -0.2 4,253,520 + Psest_4077 0.66 -0.6 4,253,521 - Psest_4077 0.66 +0.6 4,253,646 + Psest_4077 0.75 -0.7 4,253,646 + Psest_4077 0.75 -0.4 4,253,646 + Psest_4077 0.75 -0.1 4,253,646 + Psest_4077 0.75 -0.6 4,253,646 + Psest_4077 0.75 -0.3 4,253,646 + Psest_4077 0.75 -1.8 4,253,646 + Psest_4077 0.75 -0.8 4,253,646 + Psest_4077 0.75 -0.2 4,253,647 - Psest_4077 0.75 -1.2 4,253,647 - Psest_4077 0.75 -1.5 4,253,647 - Psest_4077 0.75 -0.2 4,253,647 - Psest_4077 0.75 -0.5 4,253,652 + Psest_4077 0.76 +0.1 4,253,652 + Psest_4077 0.76 -0.3 4,253,652 + Psest_4077 0.76 +0.1 4,253,653 - Psest_4077 0.76 -0.9 4,253,653 - Psest_4077 0.76 -0.9 4,253,653 - Psest_4077 0.76 -0.9 4,253,653 - Psest_4077 0.76 +1.0 4,253,653 - Psest_4077 0.76 +0.9 4,253,653 - Psest_4077 0.76 +1.5 4,253,653 - Psest_4077 0.76 -0.8 4,253,653 - Psest_4077 0.76 -0.7 4,253,653 - Psest_4077 0.76 +0.7 4,253,655 + Psest_4077 0.76 -0.1 4,253,655 + Psest_4077 0.76 -0.1 4,253,656 - Psest_4077 0.76 -1.3 4,253,656 - Psest_4077 0.76 -0.1 4,253,656 - Psest_4077 0.76 +0.3 4,253,656 - Psest_4077 0.76 -1.0 4,253,712 + Psest_4077 0.80 -1.5 4,253,712 + Psest_4077 0.80 +0.2 4,253,713 - Psest_4077 0.80 +1.0 4,253,713 - Psest_4077 0.80 -1.0 4,253,868 + -0.4 4,253,869 - +0.9 4,254,040 - +0.2 4,254,093 + +0.2 4,254,093 + +0.3 4,254,134 - +4.3 4,254,394 + Psest_4078 0.30 +4.2 4,254,794 - Psest_4078 0.71 +4.6 4,254,918 - Psest_4078 0.83 +2.3 4,254,919 + Psest_4078 0.83 +4.1 4,254,920 - Psest_4078 0.83 +3.5 4,254,920 - Psest_4078 0.83 +2.6 4,255,170 + +0.0 4,255,171 - +0.3 4,255,181 + +0.7 4,255,182 - +0.5 4,255,182 - -0.4 4,255,260 + +0.4 4,255,260 + +0.3 4,255,261 - +0.7 4,255,261 - +0.4 4,255,261 - -1.7 4,255,261 - -0.5 4,255,292 + Psest_4079 0.10 -1.6 4,255,292 + Psest_4079 0.10 +0.6 4,255,292 + Psest_4079 0.10 -0.2 4,255,293 - Psest_4079 0.10 -0.5 4,255,306 - Psest_4079 0.12 +0.0 4,255,405 + Psest_4079 0.24 +0.3 4,255,430 + Psest_4079 0.27 +0.6 4,255,430 + Psest_4079 0.27 -0.2 4,255,431 - Psest_4079 0.28 +0.4 4,255,431 - Psest_4079 0.28 +0.9 4,255,466 + Psest_4079 0.32 +0.4 4,255,467 - Psest_4079 0.32 +1.0 4,255,467 - Psest_4079 0.32 +0.8 4,255,859 + Psest_4079 0.80 -0.4 4,255,879 + Psest_4079 0.83 +0.6 4,255,879 + Psest_4079 0.83 +1.0 4,255,880 - Psest_4079 0.83 -0.6 4,255,880 - Psest_4079 0.83 -0.1 4,255,973 + -0.3 4,255,973 + -0.2 4,255,973 + -0.3 4,256,047 + +0.1
Or see this region's nucleotide sequence