Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3961 and Psest_3962 are separated by 117 nucleotides Psest_3962 and Psest_3963 are separated by 169 nucleotides Psest_3963 and Psest_3964 are separated by 87 nucleotides
Psest_3961: Psest_3961 - NTP pyrophosphohydrolases including oxidative damage repair enzymes, at 4,127,675 to 4,128,241
_3961
Psest_3962: Psest_3962 - haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED, at 4,128,359 to 4,129,039
_3962
Psest_3963: Psest_3963 - PAS domain S-box, at 4,129,209 to 4,131,770
_3963
Psest_3964: Psest_3964 - formate dehydrogenase family accessory protein FdhD, at 4,131,858 to 4,132,706
_3964
Position (kb)
4129
4130
4131
4132 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4128.221 kb on + strand at 4128.221 kb on + strand at 4128.221 kb on + strand at 4128.221 kb on + strand at 4128.221 kb on + strand at 4128.222 kb on - strand at 4128.222 kb on - strand at 4128.222 kb on - strand at 4128.222 kb on - strand at 4128.222 kb on - strand at 4128.222 kb on - strand at 4128.222 kb on - strand at 4128.222 kb on - strand at 4128.222 kb on - strand at 4128.273 kb on + strand at 4128.273 kb on + strand at 4128.284 kb on - strand at 4128.573 kb on - strand, within Psest_3962 at 4128.704 kb on - strand, within Psest_3962 at 4129.072 kb on + strand at 4129.072 kb on + strand at 4129.072 kb on + strand at 4129.072 kb on + strand at 4129.072 kb on + strand at 4129.072 kb on + strand at 4129.073 kb on - strand at 4129.073 kb on - strand at 4129.073 kb on - strand at 4129.073 kb on - strand at 4129.073 kb on - strand at 4129.073 kb on - strand at 4129.073 kb on - strand at 4129.077 kb on + strand at 4129.077 kb on + strand at 4129.077 kb on + strand at 4129.078 kb on - strand at 4129.078 kb on - strand at 4129.078 kb on - strand at 4129.078 kb on - strand at 4129.176 kb on + strand at 4129.177 kb on - strand at 4129.198 kb on + strand at 4129.199 kb on - strand at 4129.219 kb on + strand at 4129.220 kb on - strand at 4129.220 kb on - strand at 4129.404 kb on + strand at 4129.404 kb on + strand at 4129.404 kb on + strand at 4129.404 kb on + strand at 4129.405 kb on - strand at 4129.540 kb on + strand, within Psest_3963 at 4129.719 kb on + strand, within Psest_3963 at 4129.719 kb on + strand, within Psest_3963 at 4129.719 kb on + strand, within Psest_3963 at 4129.719 kb on + strand, within Psest_3963 at 4129.719 kb on + strand, within Psest_3963 at 4129.719 kb on + strand, within Psest_3963 at 4129.720 kb on - strand, within Psest_3963 at 4129.720 kb on - strand, within Psest_3963 at 4129.720 kb on - strand, within Psest_3963 at 4129.720 kb on - strand, within Psest_3963 at 4129.829 kb on - strand, within Psest_3963 at 4129.847 kb on - strand, within Psest_3963 at 4130.190 kb on + strand, within Psest_3963 at 4130.230 kb on - strand, within Psest_3963 at 4130.232 kb on + strand, within Psest_3963 at 4130.232 kb on + strand, within Psest_3963 at 4130.233 kb on - strand, within Psest_3963 at 4130.233 kb on - strand, within Psest_3963 at 4130.233 kb on - strand, within Psest_3963 at 4130.370 kb on + strand, within Psest_3963 at 4130.371 kb on - strand, within Psest_3963 at 4130.371 kb on - strand, within Psest_3963 at 4130.371 kb on - strand, within Psest_3963 at 4130.416 kb on - strand, within Psest_3963 at 4130.477 kb on - strand, within Psest_3963 at 4130.571 kb on + strand, within Psest_3963 at 4130.572 kb on - strand, within Psest_3963 at 4130.704 kb on + strand, within Psest_3963 at 4130.705 kb on - strand, within Psest_3963 at 4130.733 kb on + strand, within Psest_3963 at 4130.733 kb on + strand, within Psest_3963 at 4130.733 kb on + strand, within Psest_3963 at 4130.733 kb on + strand, within Psest_3963 at 4130.734 kb on - strand, within Psest_3963 at 4130.734 kb on - strand, within Psest_3963 at 4130.734 kb on - strand, within Psest_3963 at 4130.734 kb on - strand, within Psest_3963 at 4130.857 kb on + strand, within Psest_3963 at 4130.857 kb on + strand, within Psest_3963 at 4130.858 kb on - strand, within Psest_3963 at 4131.082 kb on - strand, within Psest_3963 at 4131.120 kb on + strand, within Psest_3963 at 4131.170 kb on - strand, within Psest_3963 at 4131.276 kb on - strand, within Psest_3963 at 4131.276 kb on - strand, within Psest_3963 at 4131.321 kb on + strand, within Psest_3963 at 4131.321 kb on + strand, within Psest_3963 at 4131.321 kb on + strand, within Psest_3963 at 4131.321 kb on + strand, within Psest_3963 at 4131.322 kb on - strand, within Psest_3963 at 4131.333 kb on + strand, within Psest_3963 at 4131.333 kb on + strand, within Psest_3963 at 4131.333 kb on + strand, within Psest_3963 at 4131.333 kb on + strand, within Psest_3963 at 4131.334 kb on - strand, within Psest_3963 at 4131.334 kb on - strand, within Psest_3963 at 4131.511 kb on + strand, within Psest_3963 at 4131.543 kb on - strand at 4131.646 kb on - strand at 4131.796 kb on - strand at 4131.930 kb on + strand at 4132.005 kb on + strand, within Psest_3964 at 4132.005 kb on + strand, within Psest_3964 at 4132.005 kb on + strand, within Psest_3964 at 4132.005 kb on + strand, within Psest_3964 at 4132.005 kb on + strand, within Psest_3964 at 4132.005 kb on + strand, within Psest_3964 at 4132.005 kb on + strand, within Psest_3964 at 4132.006 kb on - strand, within Psest_3964 at 4132.006 kb on - strand, within Psest_3964 at 4132.006 kb on - strand, within Psest_3964 at 4132.006 kb on - strand, within Psest_3964 at 4132.006 kb on - strand, within Psest_3964 at 4132.006 kb on - strand, within Psest_3964 at 4132.006 kb on - strand, within Psest_3964 at 4132.006 kb on - strand, within Psest_3964 at 4132.006 kb on - strand, within Psest_3964 at 4132.006 kb on - strand, within Psest_3964 at 4132.007 kb on + strand, within Psest_3964 at 4132.113 kb on + strand, within Psest_3964 at 4132.113 kb on + strand, within Psest_3964 at 4132.113 kb on + strand, within Psest_3964 at 4132.113 kb on + strand, within Psest_3964 at 4132.113 kb on + strand, within Psest_3964 at 4132.113 kb on + strand, within Psest_3964 at 4132.113 kb on + strand, within Psest_3964 at 4132.113 kb on + strand, within Psest_3964 at 4132.113 kb on + strand, within Psest_3964 at 4132.113 kb on + strand, within Psest_3964 at 4132.113 kb on + strand, within Psest_3964 at 4132.113 kb on + strand, within Psest_3964 at 4132.113 kb on + strand, within Psest_3964 at 4132.113 kb on + strand, within Psest_3964 at 4132.113 kb on + strand, within Psest_3964 at 4132.113 kb on + strand, within Psest_3964 at 4132.113 kb on + strand, within Psest_3964 at 4132.113 kb on + strand, within Psest_3964 at 4132.113 kb on + strand, within Psest_3964 at 4132.113 kb on + strand, within Psest_3964 at 4132.113 kb on + strand, within Psest_3964 at 4132.113 kb on + strand, within Psest_3964 at 4132.113 kb on + strand, within Psest_3964 at 4132.113 kb on + strand, within Psest_3964 at 4132.114 kb on - strand, within Psest_3964 at 4132.114 kb on - strand, within Psest_3964 at 4132.114 kb on - strand, within Psest_3964 at 4132.114 kb on - strand, within Psest_3964 at 4132.114 kb on - strand, within Psest_3964 at 4132.114 kb on - strand, within Psest_3964 at 4132.114 kb on - strand, within Psest_3964 at 4132.114 kb on - strand, within Psest_3964 at 4132.114 kb on - strand, within Psest_3964 at 4132.114 kb on - strand, within Psest_3964 at 4132.114 kb on - strand, within Psest_3964 at 4132.114 kb on - strand, within Psest_3964 at 4132.114 kb on - strand, within Psest_3964 at 4132.114 kb on - strand, within Psest_3964 at 4132.114 kb on - strand, within Psest_3964 at 4132.114 kb on - strand, within Psest_3964 at 4132.114 kb on - strand, within Psest_3964 at 4132.114 kb on - strand, within Psest_3964 at 4132.114 kb on - strand, within Psest_3964 at 4132.114 kb on - strand, within Psest_3964 at 4132.114 kb on - strand, within Psest_3964 at 4132.325 kb on - strand, within Psest_3964 at 4132.325 kb on - strand, within Psest_3964 at 4132.334 kb on + strand, within Psest_3964 at 4132.443 kb on - strand, within Psest_3964 at 4132.550 kb on - strand, within Psest_3964 at 4132.550 kb on - strand, within Psest_3964 at 4132.550 kb on - strand, within Psest_3964 at 4132.550 kb on - strand, within Psest_3964 at 4132.671 kb on + strand at 4132.671 kb on + strand at 4132.671 kb on + strand at 4132.671 kb on + strand at 4132.730 kb on + strand at 4132.730 kb on + strand at 4132.730 kb on + strand at 4132.730 kb on + strand at 4132.730 kb on + strand at 4132.730 kb on + strand at 4132.730 kb on + strand at 4132.730 kb on + strand at 4132.730 kb on + strand at 4132.730 kb on + strand at 4132.730 kb on + strand at 4132.730 kb on + strand at 4132.730 kb on + strand at 4132.730 kb on + strand at 4132.730 kb on + strand at 4132.744 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 4,128,221 + +0.9 4,128,221 + +0.6 4,128,221 + +0.1 4,128,221 + -0.1 4,128,221 + -0.3 4,128,222 - -0.7 4,128,222 - +0.1 4,128,222 - +0.7 4,128,222 - +0.3 4,128,222 - -0.4 4,128,222 - +0.2 4,128,222 - +0.3 4,128,222 - -0.6 4,128,222 - +0.0 4,128,273 + -1.2 4,128,273 + +0.2 4,128,284 - +0.2 4,128,573 - Psest_3962 0.31 +0.1 4,128,704 - Psest_3962 0.51 -0.6 4,129,072 + +0.9 4,129,072 + +0.0 4,129,072 + +1.9 4,129,072 + +1.0 4,129,072 + +0.5 4,129,072 + +1.1 4,129,073 - +1.7 4,129,073 - +0.0 4,129,073 - +1.2 4,129,073 - +0.1 4,129,073 - +0.5 4,129,073 - -0.8 4,129,073 - -0.3 4,129,077 + -0.5 4,129,077 + +1.2 4,129,077 + +1.0 4,129,078 - +0.3 4,129,078 - +0.8 4,129,078 - -0.2 4,129,078 - +1.3 4,129,176 + +1.6 4,129,177 - +0.5 4,129,198 + +0.4 4,129,199 - +0.6 4,129,219 + +1.0 4,129,220 - -0.2 4,129,220 - +0.9 4,129,404 + +0.9 4,129,404 + +1.1 4,129,404 + +1.5 4,129,404 + +0.9 4,129,405 - +0.4 4,129,540 + Psest_3963 0.13 +0.9 4,129,719 + Psest_3963 0.20 +0.9 4,129,719 + Psest_3963 0.20 +1.3 4,129,719 + Psest_3963 0.20 +0.5 4,129,719 + Psest_3963 0.20 +0.5 4,129,719 + Psest_3963 0.20 +0.2 4,129,719 + Psest_3963 0.20 +0.9 4,129,720 - Psest_3963 0.20 +1.1 4,129,720 - Psest_3963 0.20 +1.2 4,129,720 - Psest_3963 0.20 +1.2 4,129,720 - Psest_3963 0.20 +2.2 4,129,829 - Psest_3963 0.24 +0.6 4,129,847 - Psest_3963 0.25 +1.3 4,130,190 + Psest_3963 0.38 +0.9 4,130,230 - Psest_3963 0.40 +0.8 4,130,232 + Psest_3963 0.40 +1.2 4,130,232 + Psest_3963 0.40 +0.7 4,130,233 - Psest_3963 0.40 +0.4 4,130,233 - Psest_3963 0.40 +0.8 4,130,233 - Psest_3963 0.40 -0.7 4,130,370 + Psest_3963 0.45 +1.0 4,130,371 - Psest_3963 0.45 +0.3 4,130,371 - Psest_3963 0.45 +1.0 4,130,371 - Psest_3963 0.45 +1.3 4,130,416 - Psest_3963 0.47 +1.1 4,130,477 - Psest_3963 0.49 +0.2 4,130,571 + Psest_3963 0.53 +1.0 4,130,572 - Psest_3963 0.53 +1.6 4,130,704 + Psest_3963 0.58 +0.4 4,130,705 - Psest_3963 0.58 +0.3 4,130,733 + Psest_3963 0.59 +0.8 4,130,733 + Psest_3963 0.59 +0.9 4,130,733 + Psest_3963 0.59 +0.5 4,130,733 + Psest_3963 0.59 +1.6 4,130,734 - Psest_3963 0.60 +0.1 4,130,734 - Psest_3963 0.60 +0.5 4,130,734 - Psest_3963 0.60 +0.7 4,130,734 - Psest_3963 0.60 +0.8 4,130,857 + Psest_3963 0.64 +0.8 4,130,857 + Psest_3963 0.64 +0.5 4,130,858 - Psest_3963 0.64 -0.1 4,131,082 - Psest_3963 0.73 +0.3 4,131,120 + Psest_3963 0.75 +1.4 4,131,170 - Psest_3963 0.77 +1.5 4,131,276 - Psest_3963 0.81 +1.4 4,131,276 - Psest_3963 0.81 +0.4 4,131,321 + Psest_3963 0.82 +1.0 4,131,321 + Psest_3963 0.82 +0.3 4,131,321 + Psest_3963 0.82 +1.3 4,131,321 + Psest_3963 0.82 +1.1 4,131,322 - Psest_3963 0.82 +1.2 4,131,333 + Psest_3963 0.83 +0.5 4,131,333 + Psest_3963 0.83 +1.0 4,131,333 + Psest_3963 0.83 +0.3 4,131,333 + Psest_3963 0.83 +0.3 4,131,334 - Psest_3963 0.83 +0.1 4,131,334 - Psest_3963 0.83 +0.2 4,131,511 + Psest_3963 0.90 +0.6 4,131,543 - +0.6 4,131,646 - +0.7 4,131,796 - +1.3 4,131,930 + +0.4 4,132,005 + Psest_3964 0.17 +0.1 4,132,005 + Psest_3964 0.17 +0.5 4,132,005 + Psest_3964 0.17 +0.1 4,132,005 + Psest_3964 0.17 -0.5 4,132,005 + Psest_3964 0.17 +0.3 4,132,005 + Psest_3964 0.17 +0.0 4,132,005 + Psest_3964 0.17 -1.0 4,132,006 - Psest_3964 0.17 +1.3 4,132,006 - Psest_3964 0.17 -1.1 4,132,006 - Psest_3964 0.17 -0.4 4,132,006 - Psest_3964 0.17 +1.1 4,132,006 - Psest_3964 0.17 +1.3 4,132,006 - Psest_3964 0.17 -0.1 4,132,006 - Psest_3964 0.17 -0.2 4,132,006 - Psest_3964 0.17 +0.3 4,132,006 - Psest_3964 0.17 +0.6 4,132,006 - Psest_3964 0.17 -0.1 4,132,007 + Psest_3964 0.18 -0.4 4,132,113 + Psest_3964 0.30 -2.5 4,132,113 + Psest_3964 0.30 -0.1 4,132,113 + Psest_3964 0.30 +0.3 4,132,113 + Psest_3964 0.30 +0.8 4,132,113 + Psest_3964 0.30 +1.0 4,132,113 + Psest_3964 0.30 +0.6 4,132,113 + Psest_3964 0.30 +0.7 4,132,113 + Psest_3964 0.30 -0.4 4,132,113 + Psest_3964 0.30 -2.0 4,132,113 + Psest_3964 0.30 -0.3 4,132,113 + Psest_3964 0.30 +0.6 4,132,113 + Psest_3964 0.30 +0.4 4,132,113 + Psest_3964 0.30 -0.9 4,132,113 + Psest_3964 0.30 +0.2 4,132,113 + Psest_3964 0.30 +0.7 4,132,113 + Psest_3964 0.30 +1.2 4,132,113 + Psest_3964 0.30 -0.4 4,132,113 + Psest_3964 0.30 -2.2 4,132,113 + Psest_3964 0.30 +0.8 4,132,113 + Psest_3964 0.30 -0.9 4,132,113 + Psest_3964 0.30 +0.3 4,132,113 + Psest_3964 0.30 +0.3 4,132,113 + Psest_3964 0.30 -0.2 4,132,113 + Psest_3964 0.30 +0.7 4,132,114 - Psest_3964 0.30 -0.3 4,132,114 - Psest_3964 0.30 -0.3 4,132,114 - Psest_3964 0.30 +1.0 4,132,114 - Psest_3964 0.30 -0.5 4,132,114 - Psest_3964 0.30 -1.0 4,132,114 - Psest_3964 0.30 +1.3 4,132,114 - Psest_3964 0.30 +0.5 4,132,114 - Psest_3964 0.30 -0.5 4,132,114 - Psest_3964 0.30 +0.3 4,132,114 - Psest_3964 0.30 +0.2 4,132,114 - Psest_3964 0.30 -2.1 4,132,114 - Psest_3964 0.30 -0.4 4,132,114 - Psest_3964 0.30 -0.0 4,132,114 - Psest_3964 0.30 +0.2 4,132,114 - Psest_3964 0.30 -0.6 4,132,114 - Psest_3964 0.30 +0.5 4,132,114 - Psest_3964 0.30 +1.0 4,132,114 - Psest_3964 0.30 -0.2 4,132,114 - Psest_3964 0.30 +0.9 4,132,114 - Psest_3964 0.30 -0.1 4,132,114 - Psest_3964 0.30 +0.1 4,132,325 - Psest_3964 0.55 +0.1 4,132,325 - Psest_3964 0.55 +0.1 4,132,334 + Psest_3964 0.56 -0.6 4,132,443 - Psest_3964 0.69 -0.7 4,132,550 - Psest_3964 0.82 -0.3 4,132,550 - Psest_3964 0.82 +2.6 4,132,550 - Psest_3964 0.82 +1.2 4,132,550 - Psest_3964 0.82 +0.5 4,132,671 + -0.2 4,132,671 + +0.9 4,132,671 + -0.5 4,132,671 + +0.1 4,132,730 + -0.8 4,132,730 + +0.1 4,132,730 + +0.2 4,132,730 + +0.1 4,132,730 + -0.2 4,132,730 + +0.3 4,132,730 + -1.2 4,132,730 + -0.3 4,132,730 + +0.9 4,132,730 + -0.2 4,132,730 + -0.8 4,132,730 + +0.6 4,132,730 + +1.2 4,132,730 + +0.4 4,132,730 + -0.5 4,132,744 - +0.5
Or see this region's nucleotide sequence