Experiment: m.b. Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3809 and HP15_3810 are separated by 14 nucleotides HP15_3810 and HP15_3811 are separated by 25 nucleotides HP15_3811 and HP15_3812 are separated by 511 nucleotides HP15_3812 and HP15_3813 are separated by 15 nucleotides
HP15_3809: HP15_3809 - conserved hypothetical protein, membrane, at 4,036,793 to 4,037,371
_3809
HP15_3810: HP15_3810 - response regulator receiver protein, at 4,037,386 to 4,037,799
_3810
HP15_3811: HP15_3811 - conserved hypothetical protein, at 4,037,825 to 4,038,133
_3811
HP15_3812: HP15_3812 - conserved hypothetical protein, membrane, at 4,038,645 to 4,038,884
_3812
HP15_3813: HP15_3813 - conserved hypothetical protein, at 4,038,900 to 4,039,433
_3813
Position (kb)
4037
4038
4039 Strain fitness (log2 ratio)
-1
0
1 at 4036.916 kb on + strand, within HP15_3809 at 4036.924 kb on + strand, within HP15_3809 at 4036.959 kb on + strand, within HP15_3809 at 4036.964 kb on + strand, within HP15_3809 at 4036.985 kb on + strand, within HP15_3809 at 4036.993 kb on - strand, within HP15_3809 at 4037.335 kb on - strand at 4037.454 kb on + strand, within HP15_3810 at 4037.538 kb on - strand, within HP15_3810 at 4037.556 kb on - strand, within HP15_3810 at 4037.611 kb on - strand, within HP15_3810 at 4037.618 kb on + strand, within HP15_3810 at 4037.779 kb on + strand at 4037.780 kb on + strand at 4037.792 kb on - strand at 4037.803 kb on + strand at 4037.917 kb on - strand, within HP15_3811 at 4038.072 kb on - strand, within HP15_3811 at 4038.200 kb on + strand at 4038.278 kb on + strand at 4038.327 kb on - strand at 4038.345 kb on - strand at 4038.356 kb on + strand at 4038.397 kb on + strand at 4038.504 kb on + strand at 4038.595 kb on + strand at 4038.628 kb on + strand at 4038.628 kb on + strand at 4038.636 kb on - strand at 4038.636 kb on - strand at 4038.703 kb on - strand, within HP15_3812 at 4038.817 kb on - strand, within HP15_3812 at 4038.822 kb on + strand, within HP15_3812 at 4038.841 kb on + strand, within HP15_3812 at 4038.843 kb on + strand, within HP15_3812 at 4038.849 kb on - strand, within HP15_3812 at 4038.849 kb on - strand, within HP15_3812 at 4038.878 kb on + strand at 4038.906 kb on - strand at 4039.123 kb on + strand, within HP15_3813 at 4039.131 kb on - strand, within HP15_3813
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.016 mg/ml remove 4,036,916 + HP15_3809 0.21 +0.7 4,036,924 + HP15_3809 0.23 +0.2 4,036,959 + HP15_3809 0.29 +0.2 4,036,964 + HP15_3809 0.30 +0.7 4,036,985 + HP15_3809 0.33 -0.2 4,036,993 - HP15_3809 0.35 +0.8 4,037,335 - +0.8 4,037,454 + HP15_3810 0.16 -0.2 4,037,538 - HP15_3810 0.37 +0.6 4,037,556 - HP15_3810 0.41 +0.5 4,037,611 - HP15_3810 0.54 -0.4 4,037,618 + HP15_3810 0.56 -0.1 4,037,779 + -0.4 4,037,780 + -0.6 4,037,792 - +0.0 4,037,803 + +0.5 4,037,917 - HP15_3811 0.30 +0.2 4,038,072 - HP15_3811 0.80 +0.6 4,038,200 + -0.0 4,038,278 + +0.4 4,038,327 - +1.2 4,038,345 - +1.0 4,038,356 + -0.2 4,038,397 + +1.0 4,038,504 + +0.8 4,038,595 + +0.7 4,038,628 + +0.3 4,038,628 + +0.1 4,038,636 - +0.4 4,038,636 - +0.2 4,038,703 - HP15_3812 0.24 -1.4 4,038,817 - HP15_3812 0.72 -0.4 4,038,822 + HP15_3812 0.74 -0.5 4,038,841 + HP15_3812 0.82 -0.4 4,038,843 + HP15_3812 0.82 +0.3 4,038,849 - HP15_3812 0.85 +1.4 4,038,849 - HP15_3812 0.85 -0.6 4,038,878 + +0.3 4,038,906 - -0.6 4,039,123 + HP15_3813 0.42 -0.5 4,039,131 - HP15_3813 0.43 -1.0
Or see this region's nucleotide sequence