Strain Fitness in Marinobacter adhaerens HP15 around HP15_3811

Experiment: m.b. Thallium(I) acetate 0.016 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3809 and HP15_3810 are separated by 14 nucleotidesHP15_3810 and HP15_3811 are separated by 25 nucleotidesHP15_3811 and HP15_3812 are separated by 511 nucleotidesHP15_3812 and HP15_3813 are separated by 15 nucleotides HP15_3809: HP15_3809 - conserved hypothetical protein, membrane, at 4,036,793 to 4,037,371 _3809 HP15_3810: HP15_3810 - response regulator receiver protein, at 4,037,386 to 4,037,799 _3810 HP15_3811: HP15_3811 - conserved hypothetical protein, at 4,037,825 to 4,038,133 _3811 HP15_3812: HP15_3812 - conserved hypothetical protein, membrane, at 4,038,645 to 4,038,884 _3812 HP15_3813: HP15_3813 - conserved hypothetical protein, at 4,038,900 to 4,039,433 _3813 Position (kb) 4037 4038 4039Strain fitness (log2 ratio) -1 0 1at 4036.916 kb on + strand, within HP15_3809at 4036.924 kb on + strand, within HP15_3809at 4036.959 kb on + strand, within HP15_3809at 4036.964 kb on + strand, within HP15_3809at 4036.985 kb on + strand, within HP15_3809at 4036.993 kb on - strand, within HP15_3809at 4037.335 kb on - strandat 4037.454 kb on + strand, within HP15_3810at 4037.538 kb on - strand, within HP15_3810at 4037.556 kb on - strand, within HP15_3810at 4037.611 kb on - strand, within HP15_3810at 4037.618 kb on + strand, within HP15_3810at 4037.779 kb on + strandat 4037.780 kb on + strandat 4037.792 kb on - strandat 4037.803 kb on + strandat 4037.917 kb on - strand, within HP15_3811at 4038.072 kb on - strand, within HP15_3811at 4038.200 kb on + strandat 4038.278 kb on + strandat 4038.327 kb on - strandat 4038.345 kb on - strandat 4038.356 kb on + strandat 4038.397 kb on + strandat 4038.504 kb on + strandat 4038.595 kb on + strandat 4038.628 kb on + strandat 4038.628 kb on + strandat 4038.636 kb on - strandat 4038.636 kb on - strandat 4038.703 kb on - strand, within HP15_3812at 4038.817 kb on - strand, within HP15_3812at 4038.822 kb on + strand, within HP15_3812at 4038.841 kb on + strand, within HP15_3812at 4038.843 kb on + strand, within HP15_3812at 4038.849 kb on - strand, within HP15_3812at 4038.849 kb on - strand, within HP15_3812at 4038.878 kb on + strandat 4038.906 kb on - strandat 4039.123 kb on + strand, within HP15_3813at 4039.131 kb on - strand, within HP15_3813

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.016 mg/ml
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4,036,916 + HP15_3809 0.21 +0.7
4,036,924 + HP15_3809 0.23 +0.2
4,036,959 + HP15_3809 0.29 +0.2
4,036,964 + HP15_3809 0.30 +0.7
4,036,985 + HP15_3809 0.33 -0.2
4,036,993 - HP15_3809 0.35 +0.8
4,037,335 - +0.8
4,037,454 + HP15_3810 0.16 -0.2
4,037,538 - HP15_3810 0.37 +0.6
4,037,556 - HP15_3810 0.41 +0.5
4,037,611 - HP15_3810 0.54 -0.4
4,037,618 + HP15_3810 0.56 -0.1
4,037,779 + -0.4
4,037,780 + -0.6
4,037,792 - +0.0
4,037,803 + +0.5
4,037,917 - HP15_3811 0.30 +0.2
4,038,072 - HP15_3811 0.80 +0.6
4,038,200 + -0.0
4,038,278 + +0.4
4,038,327 - +1.2
4,038,345 - +1.0
4,038,356 + -0.2
4,038,397 + +1.0
4,038,504 + +0.8
4,038,595 + +0.7
4,038,628 + +0.3
4,038,628 + +0.1
4,038,636 - +0.4
4,038,636 - +0.2
4,038,703 - HP15_3812 0.24 -1.4
4,038,817 - HP15_3812 0.72 -0.4
4,038,822 + HP15_3812 0.74 -0.5
4,038,841 + HP15_3812 0.82 -0.4
4,038,843 + HP15_3812 0.82 +0.3
4,038,849 - HP15_3812 0.85 +1.4
4,038,849 - HP15_3812 0.85 -0.6
4,038,878 + +0.3
4,038,906 - -0.6
4,039,123 + HP15_3813 0.42 -0.5
4,039,131 - HP15_3813 0.43 -1.0

Or see this region's nucleotide sequence