Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3882 and Psest_3883 are separated by 70 nucleotides Psest_3883 and Psest_3884 overlap by 4 nucleotides Psest_3884 and Psest_3885 are separated by 76 nucleotides Psest_3885 and Psest_3886 are separated by 12 nucleotides
Psest_3882: Psest_3882 - Opacity protein and related surface antigens, at 4,052,528 to 4,053,133
_3882
Psest_3883: Psest_3883 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 4,053,204 to 4,053,881
_3883
Psest_3884: Psest_3884 - Signal transduction histidine kinase, at 4,053,878 to 4,055,275
_3884
Psest_3885: Psest_3885 - conserved hypothetical protein, steroid delta-isomerase-related, at 4,055,352 to 4,055,795
_3885
Psest_3886: Psest_3886 - Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit, at 4,055,808 to 4,057,457
_3886
Position (kb)
4053
4054
4055
4056 Strain fitness (log2 ratio)
-1
0
1
2
3 at 4052.925 kb on - strand, within Psest_3882 at 4052.925 kb on - strand, within Psest_3882 at 4053.087 kb on + strand at 4053.088 kb on - strand at 4053.088 kb on - strand at 4053.088 kb on - strand at 4053.108 kb on - strand at 4053.108 kb on - strand at 4053.108 kb on - strand at 4053.108 kb on - strand at 4053.108 kb on - strand at 4053.122 kb on + strand at 4053.122 kb on + strand at 4053.123 kb on - strand at 4053.123 kb on - strand at 4053.140 kb on + strand at 4053.140 kb on + strand at 4053.141 kb on - strand at 4053.141 kb on - strand at 4053.141 kb on - strand at 4053.372 kb on - strand, within Psest_3883 at 4053.431 kb on + strand, within Psest_3883 at 4053.495 kb on + strand, within Psest_3883 at 4053.495 kb on + strand, within Psest_3883 at 4053.495 kb on + strand, within Psest_3883 at 4053.495 kb on + strand, within Psest_3883 at 4053.495 kb on + strand, within Psest_3883 at 4053.495 kb on + strand, within Psest_3883 at 4053.496 kb on - strand, within Psest_3883 at 4053.496 kb on - strand, within Psest_3883 at 4053.496 kb on - strand, within Psest_3883 at 4053.496 kb on - strand, within Psest_3883 at 4053.496 kb on - strand, within Psest_3883 at 4053.661 kb on - strand, within Psest_3883 at 4053.666 kb on + strand, within Psest_3883 at 4053.681 kb on + strand, within Psest_3883 at 4053.739 kb on - strand, within Psest_3883 at 4053.739 kb on - strand, within Psest_3883 at 4053.739 kb on - strand, within Psest_3883 at 4053.855 kb on + strand at 4054.181 kb on + strand, within Psest_3884 at 4055.310 kb on + strand at 4055.310 kb on + strand at 4055.311 kb on - strand at 4055.311 kb on - strand at 4055.977 kb on + strand, within Psest_3886 at 4055.977 kb on + strand, within Psest_3886 at 4055.977 kb on + strand, within Psest_3886 at 4055.977 kb on + strand, within Psest_3886 at 4055.977 kb on + strand, within Psest_3886 at 4055.977 kb on + strand, within Psest_3886 at 4055.977 kb on + strand, within Psest_3886 at 4055.977 kb on + strand, within Psest_3886 at 4055.977 kb on + strand, within Psest_3886 at 4055.977 kb on + strand, within Psest_3886 at 4055.977 kb on + strand, within Psest_3886 at 4055.977 kb on + strand, within Psest_3886 at 4055.977 kb on + strand, within Psest_3886 at 4055.977 kb on + strand, within Psest_3886 at 4055.977 kb on + strand, within Psest_3886 at 4055.977 kb on + strand, within Psest_3886 at 4055.978 kb on - strand, within Psest_3886 at 4055.978 kb on - strand, within Psest_3886 at 4055.978 kb on - strand, within Psest_3886 at 4055.978 kb on - strand, within Psest_3886 at 4055.978 kb on - strand, within Psest_3886 at 4055.978 kb on - strand, within Psest_3886 at 4055.978 kb on - strand, within Psest_3886 at 4055.978 kb on - strand, within Psest_3886 at 4055.978 kb on - strand, within Psest_3886 at 4055.978 kb on - strand, within Psest_3886 at 4055.978 kb on - strand, within Psest_3886 at 4055.978 kb on - strand, within Psest_3886 at 4055.978 kb on - strand, within Psest_3886 at 4055.978 kb on - strand, within Psest_3886 at 4055.978 kb on - strand, within Psest_3886 at 4055.978 kb on - strand, within Psest_3886 at 4055.978 kb on - strand, within Psest_3886 at 4055.978 kb on - strand, within Psest_3886 at 4055.978 kb on - strand, within Psest_3886 at 4055.978 kb on - strand, within Psest_3886 at 4055.978 kb on - strand, within Psest_3886 at 4055.978 kb on - strand, within Psest_3886 at 4055.978 kb on - strand, within Psest_3886 at 4055.978 kb on - strand, within Psest_3886 at 4055.978 kb on - strand, within Psest_3886 at 4055.978 kb on - strand, within Psest_3886 at 4055.979 kb on + strand, within Psest_3886 at 4055.979 kb on + strand, within Psest_3886 at 4055.979 kb on + strand, within Psest_3886 at 4055.979 kb on + strand, within Psest_3886 at 4055.979 kb on + strand, within Psest_3886 at 4055.979 kb on + strand, within Psest_3886 at 4055.980 kb on - strand, within Psest_3886 at 4055.980 kb on - strand, within Psest_3886 at 4055.980 kb on - strand, within Psest_3886
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 4,052,925 - Psest_3882 0.66 +0.1 4,052,925 - Psest_3882 0.66 +0.6 4,053,087 + -0.0 4,053,088 - +0.1 4,053,088 - -0.0 4,053,088 - +1.0 4,053,108 - -0.3 4,053,108 - +0.0 4,053,108 - +0.7 4,053,108 - +0.9 4,053,108 - +1.3 4,053,122 + +0.5 4,053,122 + +1.3 4,053,123 - +0.1 4,053,123 - -0.2 4,053,140 + -0.2 4,053,140 + +0.0 4,053,141 - -0.6 4,053,141 - +0.1 4,053,141 - +0.5 4,053,372 - Psest_3883 0.25 +0.9 4,053,431 + Psest_3883 0.33 -0.0 4,053,495 + Psest_3883 0.43 +1.9 4,053,495 + Psest_3883 0.43 +3.3 4,053,495 + Psest_3883 0.43 +0.1 4,053,495 + Psest_3883 0.43 +0.3 4,053,495 + Psest_3883 0.43 +0.5 4,053,495 + Psest_3883 0.43 +0.1 4,053,496 - Psest_3883 0.43 +1.3 4,053,496 - Psest_3883 0.43 +0.5 4,053,496 - Psest_3883 0.43 -0.8 4,053,496 - Psest_3883 0.43 +0.2 4,053,496 - Psest_3883 0.43 +1.7 4,053,661 - Psest_3883 0.67 +1.6 4,053,666 + Psest_3883 0.68 +1.0 4,053,681 + Psest_3883 0.70 -0.5 4,053,739 - Psest_3883 0.79 +0.5 4,053,739 - Psest_3883 0.79 +1.0 4,053,739 - Psest_3883 0.79 -0.2 4,053,855 + +1.3 4,054,181 + Psest_3884 0.22 +1.2 4,055,310 + +1.1 4,055,310 + -0.3 4,055,311 - +1.3 4,055,311 - +0.4 4,055,977 + Psest_3886 0.10 -0.0 4,055,977 + Psest_3886 0.10 +1.5 4,055,977 + Psest_3886 0.10 +0.3 4,055,977 + Psest_3886 0.10 +1.3 4,055,977 + Psest_3886 0.10 -0.3 4,055,977 + Psest_3886 0.10 -0.5 4,055,977 + Psest_3886 0.10 -0.3 4,055,977 + Psest_3886 0.10 +1.1 4,055,977 + Psest_3886 0.10 -1.0 4,055,977 + Psest_3886 0.10 -0.1 4,055,977 + Psest_3886 0.10 -1.0 4,055,977 + Psest_3886 0.10 +1.5 4,055,977 + Psest_3886 0.10 +1.6 4,055,977 + Psest_3886 0.10 +1.3 4,055,977 + Psest_3886 0.10 +0.9 4,055,977 + Psest_3886 0.10 +0.7 4,055,978 - Psest_3886 0.10 +1.9 4,055,978 - Psest_3886 0.10 +1.0 4,055,978 - Psest_3886 0.10 +0.7 4,055,978 - Psest_3886 0.10 +0.8 4,055,978 - Psest_3886 0.10 -1.4 4,055,978 - Psest_3886 0.10 +0.4 4,055,978 - Psest_3886 0.10 -0.0 4,055,978 - Psest_3886 0.10 +1.0 4,055,978 - Psest_3886 0.10 +0.7 4,055,978 - Psest_3886 0.10 +0.1 4,055,978 - Psest_3886 0.10 -0.6 4,055,978 - Psest_3886 0.10 +1.2 4,055,978 - Psest_3886 0.10 +0.7 4,055,978 - Psest_3886 0.10 -0.3 4,055,978 - Psest_3886 0.10 -1.3 4,055,978 - Psest_3886 0.10 +0.5 4,055,978 - Psest_3886 0.10 +0.3 4,055,978 - Psest_3886 0.10 +1.0 4,055,978 - Psest_3886 0.10 +0.4 4,055,978 - Psest_3886 0.10 +0.1 4,055,978 - Psest_3886 0.10 +0.3 4,055,978 - Psest_3886 0.10 -0.2 4,055,978 - Psest_3886 0.10 -0.2 4,055,978 - Psest_3886 0.10 +1.3 4,055,978 - Psest_3886 0.10 +0.1 4,055,978 - Psest_3886 0.10 +1.2 4,055,979 + Psest_3886 0.10 +1.4 4,055,979 + Psest_3886 0.10 +0.3 4,055,979 + Psest_3886 0.10 -0.9 4,055,979 + Psest_3886 0.10 +0.2 4,055,979 + Psest_3886 0.10 +1.3 4,055,979 + Psest_3886 0.10 +1.0 4,055,980 - Psest_3886 0.10 +1.6 4,055,980 - Psest_3886 0.10 -0.7 4,055,980 - Psest_3886 0.10 -0.2
Or see this region's nucleotide sequence