Experiment: m.b. Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3721 and HP15_3722 are separated by 76 nucleotides HP15_3722 and HP15_3723 are separated by 519 nucleotides HP15_3723 and HP15_3724 overlap by 1 nucleotides HP15_3724 and HP15_3725 overlap by 4 nucleotides
HP15_3721: HP15_3721 - Rad3-related DNA helicase, at 3,935,668 to 3,937,965
_3721
HP15_3722: HP15_3722 - hypothetical protein, at 3,938,042 to 3,938,428
_3722
HP15_3723: HP15_3723 - PTS system, glucose-specific EIIA/HPr/phosphoenolpyruvate-protein phosphotransferase components, at 3,938,948 to 3,941,884
_3723
HP15_3724: HP15_3724 - 1-phosphofructokinase, at 3,941,884 to 3,942,849
_3724
HP15_3725: HP15_3725 - PTS system, fructose-specific IIBC component, at 3,942,846 to 3,944,609
_3725
Position (kb)
3938
3939
3940
3941
3942 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3938.020 kb on + strand at 3938.069 kb on - strand at 3938.174 kb on - strand, within HP15_3722 at 3938.174 kb on - strand, within HP15_3722 at 3938.195 kb on - strand, within HP15_3722 at 3938.195 kb on - strand, within HP15_3722 at 3938.253 kb on - strand, within HP15_3722 at 3938.274 kb on + strand, within HP15_3722 at 3938.282 kb on - strand, within HP15_3722 at 3938.295 kb on - strand, within HP15_3722 at 3938.322 kb on - strand, within HP15_3722 at 3938.322 kb on - strand, within HP15_3722 at 3938.398 kb on + strand at 3938.398 kb on + strand at 3938.424 kb on + strand at 3938.456 kb on - strand at 3938.657 kb on - strand at 3938.742 kb on + strand at 3938.750 kb on - strand at 3938.750 kb on - strand at 3938.822 kb on + strand at 3938.957 kb on + strand at 3939.043 kb on + strand at 3939.126 kb on - strand at 3939.209 kb on + strand at 3939.209 kb on + strand at 3939.209 kb on + strand at 3939.209 kb on + strand at 3939.209 kb on + strand at 3939.217 kb on - strand at 3939.217 kb on - strand at 3939.217 kb on - strand at 3939.217 kb on - strand at 3939.217 kb on - strand at 3939.217 kb on - strand at 3939.235 kb on + strand at 3939.343 kb on - strand, within HP15_3723 at 3939.348 kb on + strand, within HP15_3723 at 3939.348 kb on + strand, within HP15_3723 at 3939.356 kb on - strand, within HP15_3723 at 3939.408 kb on + strand, within HP15_3723 at 3939.411 kb on - strand, within HP15_3723 at 3939.416 kb on - strand, within HP15_3723 at 3939.416 kb on - strand, within HP15_3723 at 3939.419 kb on + strand, within HP15_3723 at 3939.476 kb on + strand, within HP15_3723 at 3939.528 kb on + strand, within HP15_3723 at 3939.566 kb on + strand, within HP15_3723 at 3939.574 kb on + strand, within HP15_3723 at 3939.680 kb on + strand, within HP15_3723 at 3939.757 kb on - strand, within HP15_3723 at 3939.773 kb on - strand, within HP15_3723 at 3939.823 kb on - strand, within HP15_3723 at 3939.836 kb on - strand, within HP15_3723 at 3939.893 kb on - strand, within HP15_3723 at 3939.903 kb on - strand, within HP15_3723 at 3939.903 kb on - strand, within HP15_3723 at 3939.903 kb on - strand, within HP15_3723 at 3939.911 kb on - strand, within HP15_3723 at 3939.974 kb on - strand, within HP15_3723 at 3940.052 kb on + strand, within HP15_3723 at 3940.052 kb on + strand, within HP15_3723 at 3940.052 kb on + strand, within HP15_3723 at 3940.052 kb on + strand, within HP15_3723 at 3940.052 kb on + strand, within HP15_3723 at 3940.052 kb on + strand, within HP15_3723 at 3940.060 kb on - strand, within HP15_3723 at 3940.060 kb on - strand, within HP15_3723 at 3940.114 kb on - strand, within HP15_3723 at 3940.121 kb on + strand, within HP15_3723 at 3940.290 kb on + strand, within HP15_3723 at 3940.380 kb on - strand, within HP15_3723 at 3940.528 kb on - strand, within HP15_3723 at 3940.528 kb on - strand, within HP15_3723 at 3940.613 kb on - strand, within HP15_3723 at 3940.621 kb on + strand, within HP15_3723 at 3940.629 kb on - strand, within HP15_3723 at 3940.705 kb on + strand, within HP15_3723 at 3940.713 kb on + strand, within HP15_3723 at 3940.713 kb on + strand, within HP15_3723 at 3940.729 kb on + strand, within HP15_3723 at 3940.777 kb on - strand, within HP15_3723 at 3940.792 kb on + strand, within HP15_3723 at 3940.839 kb on + strand, within HP15_3723 at 3940.847 kb on - strand, within HP15_3723 at 3940.872 kb on + strand, within HP15_3723 at 3940.872 kb on + strand, within HP15_3723 at 3940.885 kb on - strand, within HP15_3723 at 3940.890 kb on + strand, within HP15_3723 at 3940.893 kb on - strand, within HP15_3723 at 3941.008 kb on - strand, within HP15_3723 at 3941.010 kb on + strand, within HP15_3723 at 3941.028 kb on - strand, within HP15_3723 at 3941.162 kb on + strand, within HP15_3723 at 3941.170 kb on - strand, within HP15_3723 at 3941.180 kb on - strand, within HP15_3723 at 3941.193 kb on + strand, within HP15_3723 at 3941.193 kb on + strand, within HP15_3723 at 3941.221 kb on + strand, within HP15_3723 at 3941.282 kb on + strand, within HP15_3723 at 3941.314 kb on + strand, within HP15_3723 at 3941.317 kb on - strand, within HP15_3723 at 3941.322 kb on - strand, within HP15_3723 at 3941.360 kb on + strand, within HP15_3723 at 3941.486 kb on - strand, within HP15_3723 at 3941.582 kb on - strand, within HP15_3723 at 3941.582 kb on - strand, within HP15_3723 at 3941.598 kb on + strand at 3941.608 kb on + strand at 3941.611 kb on + strand at 3941.611 kb on + strand at 3941.611 kb on - strand at 3941.670 kb on + strand at 3941.695 kb on - strand at 3941.757 kb on + strand at 3941.765 kb on - strand at 3941.769 kb on + strand at 3941.788 kb on - strand at 3941.850 kb on + strand at 3941.860 kb on + strand at 3941.974 kb on + strand at 3941.974 kb on + strand at 3941.974 kb on + strand at 3941.974 kb on + strand at 3941.982 kb on - strand, within HP15_3724 at 3941.982 kb on - strand, within HP15_3724 at 3941.982 kb on - strand, within HP15_3724 at 3941.982 kb on - strand, within HP15_3724 at 3941.983 kb on - strand, within HP15_3724 at 3942.031 kb on + strand, within HP15_3724 at 3942.050 kb on + strand, within HP15_3724 at 3942.061 kb on - strand, within HP15_3724 at 3942.072 kb on + strand, within HP15_3724 at 3942.107 kb on - strand, within HP15_3724 at 3942.107 kb on - strand, within HP15_3724 at 3942.150 kb on - strand, within HP15_3724 at 3942.193 kb on + strand, within HP15_3724 at 3942.240 kb on - strand, within HP15_3724 at 3942.394 kb on + strand, within HP15_3724 at 3942.480 kb on - strand, within HP15_3724 at 3942.554 kb on - strand, within HP15_3724 at 3942.621 kb on + strand, within HP15_3724 at 3942.629 kb on - strand, within HP15_3724 at 3942.629 kb on - strand, within HP15_3724 at 3942.629 kb on - strand, within HP15_3724 at 3942.629 kb on - strand, within HP15_3724 at 3942.629 kb on - strand, within HP15_3724 at 3942.708 kb on - strand, within HP15_3724 at 3942.708 kb on - strand, within HP15_3724 at 3942.749 kb on - strand, within HP15_3724
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.016 mg/ml remove 3,938,020 + -0.1 3,938,069 - +0.1 3,938,174 - HP15_3722 0.34 -0.5 3,938,174 - HP15_3722 0.34 -0.0 3,938,195 - HP15_3722 0.40 -0.2 3,938,195 - HP15_3722 0.40 -0.5 3,938,253 - HP15_3722 0.55 +1.0 3,938,274 + HP15_3722 0.60 -0.2 3,938,282 - HP15_3722 0.62 -0.1 3,938,295 - HP15_3722 0.65 -0.3 3,938,322 - HP15_3722 0.72 +0.2 3,938,322 - HP15_3722 0.72 -0.4 3,938,398 + +1.2 3,938,398 + +1.0 3,938,424 + +1.4 3,938,456 - -0.7 3,938,657 - +0.2 3,938,742 + +0.2 3,938,750 - -0.6 3,938,750 - +1.1 3,938,822 + +0.5 3,938,957 + -0.9 3,939,043 + -0.4 3,939,126 - +0.7 3,939,209 + +2.0 3,939,209 + +0.0 3,939,209 + +0.9 3,939,209 + -0.4 3,939,209 + +0.7 3,939,217 - -0.2 3,939,217 - -0.3 3,939,217 - -1.0 3,939,217 - -0.3 3,939,217 - -0.0 3,939,217 - -0.4 3,939,235 + -0.2 3,939,343 - HP15_3723 0.13 -1.1 3,939,348 + HP15_3723 0.14 -0.7 3,939,348 + HP15_3723 0.14 -0.2 3,939,356 - HP15_3723 0.14 -0.5 3,939,408 + HP15_3723 0.16 +0.5 3,939,411 - HP15_3723 0.16 -0.2 3,939,416 - HP15_3723 0.16 +0.8 3,939,416 - HP15_3723 0.16 -0.7 3,939,419 + HP15_3723 0.16 +0.3 3,939,476 + HP15_3723 0.18 -0.5 3,939,528 + HP15_3723 0.20 -0.3 3,939,566 + HP15_3723 0.21 +0.7 3,939,574 + HP15_3723 0.21 +0.2 3,939,680 + HP15_3723 0.25 -0.5 3,939,757 - HP15_3723 0.28 -0.6 3,939,773 - HP15_3723 0.28 -0.2 3,939,823 - HP15_3723 0.30 -2.4 3,939,836 - HP15_3723 0.30 +0.4 3,939,893 - HP15_3723 0.32 +0.6 3,939,903 - HP15_3723 0.33 -0.3 3,939,903 - HP15_3723 0.33 -0.4 3,939,903 - HP15_3723 0.33 +0.2 3,939,911 - HP15_3723 0.33 +0.7 3,939,974 - HP15_3723 0.35 -0.4 3,940,052 + HP15_3723 0.38 +0.1 3,940,052 + HP15_3723 0.38 +0.2 3,940,052 + HP15_3723 0.38 -0.7 3,940,052 + HP15_3723 0.38 -2.0 3,940,052 + HP15_3723 0.38 -0.4 3,940,052 + HP15_3723 0.38 -0.4 3,940,060 - HP15_3723 0.38 -0.2 3,940,060 - HP15_3723 0.38 +0.3 3,940,114 - HP15_3723 0.40 -0.2 3,940,121 + HP15_3723 0.40 -0.2 3,940,290 + HP15_3723 0.46 -0.3 3,940,380 - HP15_3723 0.49 -0.3 3,940,528 - HP15_3723 0.54 +0.5 3,940,528 - HP15_3723 0.54 +0.2 3,940,613 - HP15_3723 0.57 -0.8 3,940,621 + HP15_3723 0.57 -0.9 3,940,629 - HP15_3723 0.57 -0.0 3,940,705 + HP15_3723 0.60 +1.4 3,940,713 + HP15_3723 0.60 -1.5 3,940,713 + HP15_3723 0.60 -0.5 3,940,729 + HP15_3723 0.61 -1.3 3,940,777 - HP15_3723 0.62 +0.1 3,940,792 + HP15_3723 0.63 +1.1 3,940,839 + HP15_3723 0.64 +0.1 3,940,847 - HP15_3723 0.65 -1.5 3,940,872 + HP15_3723 0.66 +0.6 3,940,872 + HP15_3723 0.66 -0.0 3,940,885 - HP15_3723 0.66 +0.2 3,940,890 + HP15_3723 0.66 -0.1 3,940,893 - HP15_3723 0.66 -0.1 3,941,008 - HP15_3723 0.70 +0.5 3,941,010 + HP15_3723 0.70 +0.7 3,941,028 - HP15_3723 0.71 -0.1 3,941,162 + HP15_3723 0.75 +0.4 3,941,170 - HP15_3723 0.76 +0.2 3,941,180 - HP15_3723 0.76 +0.9 3,941,193 + HP15_3723 0.76 -1.1 3,941,193 + HP15_3723 0.76 +0.0 3,941,221 + HP15_3723 0.77 +0.0 3,941,282 + HP15_3723 0.79 -0.1 3,941,314 + HP15_3723 0.81 +0.3 3,941,317 - HP15_3723 0.81 +1.0 3,941,322 - HP15_3723 0.81 +0.3 3,941,360 + HP15_3723 0.82 -0.3 3,941,486 - HP15_3723 0.86 -0.0 3,941,582 - HP15_3723 0.90 +1.0 3,941,582 - HP15_3723 0.90 -0.6 3,941,598 + -0.4 3,941,608 + +0.2 3,941,611 + -1.5 3,941,611 + -0.2 3,941,611 - +0.8 3,941,670 + -0.7 3,941,695 - -1.4 3,941,757 + -1.6 3,941,765 - -1.8 3,941,769 + +0.5 3,941,788 - +0.7 3,941,850 + -0.3 3,941,860 + +0.4 3,941,974 + -1.7 3,941,974 + -1.0 3,941,974 + -2.2 3,941,974 + -0.2 3,941,982 - HP15_3724 0.10 +0.1 3,941,982 - HP15_3724 0.10 -0.4 3,941,982 - HP15_3724 0.10 +0.1 3,941,982 - HP15_3724 0.10 +0.8 3,941,983 - HP15_3724 0.10 -1.4 3,942,031 + HP15_3724 0.15 -1.4 3,942,050 + HP15_3724 0.17 -1.1 3,942,061 - HP15_3724 0.18 -0.8 3,942,072 + HP15_3724 0.19 -2.8 3,942,107 - HP15_3724 0.23 +0.3 3,942,107 - HP15_3724 0.23 -0.2 3,942,150 - HP15_3724 0.28 +1.9 3,942,193 + HP15_3724 0.32 -3.1 3,942,240 - HP15_3724 0.37 +0.5 3,942,394 + HP15_3724 0.53 -2.9 3,942,480 - HP15_3724 0.62 +0.5 3,942,554 - HP15_3724 0.69 -0.3 3,942,621 + HP15_3724 0.76 -3.5 3,942,629 - HP15_3724 0.77 +0.2 3,942,629 - HP15_3724 0.77 +0.3 3,942,629 - HP15_3724 0.77 -0.2 3,942,629 - HP15_3724 0.77 -1.5 3,942,629 - HP15_3724 0.77 -1.6 3,942,708 - HP15_3724 0.85 -0.2 3,942,708 - HP15_3724 0.85 +0.5 3,942,749 - HP15_3724 0.90 -0.4
Or see this region's nucleotide sequence