Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3734 and Psest_3735 are separated by 147 nucleotides Psest_3735 and Psest_3736 are separated by 4 nucleotides Psest_3736 and Psest_3737 are separated by 14 nucleotides
Psest_3734: Psest_3734 - Uncharacterized protein involved in an early stage of isoprenoid biosynthesis, at 3,907,705 to 3,908,370
_3734
Psest_3735: Psest_3735 - uncharacterized domain 1, at 3,908,518 to 3,908,985
_3735
Psest_3736: Psest_3736 - Uncharacterized protein conserved in bacteria, at 3,908,990 to 3,909,445
_3736
Psest_3737: Psest_3737 - Putative threonine efflux protein, at 3,909,460 to 3,910,092
_3737
Position (kb)
3908
3909 Strain fitness (log2 ratio)
-2
-1
0
1 at 3907.644 kb on - strand at 3907.644 kb on - strand at 3907.644 kb on - strand at 3907.644 kb on - strand at 3907.704 kb on + strand at 3907.704 kb on + strand at 3907.705 kb on - strand at 3907.747 kb on + strand at 3907.747 kb on + strand at 3907.748 kb on - strand at 3907.748 kb on - strand at 3907.765 kb on + strand at 3907.765 kb on + strand at 3907.765 kb on + strand at 3907.765 kb on + strand at 3907.765 kb on + strand at 3907.765 kb on + strand at 3907.765 kb on + strand at 3907.765 kb on + strand at 3907.766 kb on - strand at 3907.766 kb on - strand at 3907.766 kb on - strand at 3907.766 kb on - strand at 3907.766 kb on - strand at 3907.766 kb on - strand at 3907.766 kb on - strand at 3907.766 kb on - strand at 3907.766 kb on - strand at 3908.284 kb on + strand, within Psest_3734 at 3908.284 kb on + strand, within Psest_3734 at 3908.284 kb on + strand, within Psest_3734 at 3908.284 kb on + strand, within Psest_3734 at 3908.284 kb on + strand, within Psest_3734 at 3908.284 kb on + strand, within Psest_3734 at 3908.284 kb on + strand, within Psest_3734 at 3908.284 kb on + strand, within Psest_3734 at 3908.284 kb on + strand, within Psest_3734 at 3908.284 kb on + strand, within Psest_3734 at 3908.284 kb on + strand, within Psest_3734 at 3908.284 kb on + strand, within Psest_3734 at 3908.284 kb on + strand, within Psest_3734 at 3908.284 kb on + strand, within Psest_3734 at 3908.284 kb on + strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.326 kb on + strand at 3908.326 kb on + strand at 3908.326 kb on + strand at 3908.326 kb on + strand at 3908.326 kb on + strand at 3908.326 kb on + strand at 3908.326 kb on + strand at 3908.327 kb on - strand at 3908.839 kb on + strand, within Psest_3735 at 3908.840 kb on - strand, within Psest_3735 at 3908.958 kb on - strand at 3908.971 kb on + strand at 3908.971 kb on + strand at 3908.971 kb on + strand at 3908.972 kb on - strand at 3908.972 kb on - strand at 3908.972 kb on - strand at 3908.972 kb on - strand at 3908.972 kb on - strand at 3908.972 kb on - strand at 3908.972 kb on - strand at 3908.972 kb on - strand at 3909.305 kb on + strand, within Psest_3736 at 3909.306 kb on - strand, within Psest_3736 at 3909.306 kb on - strand, within Psest_3736 at 3909.464 kb on - strand at 3909.464 kb on - strand at 3909.593 kb on + strand, within Psest_3737 at 3909.593 kb on + strand, within Psest_3737 at 3909.593 kb on + strand, within Psest_3737 at 3909.594 kb on - strand, within Psest_3737 at 3909.594 kb on - strand, within Psest_3737 at 3909.594 kb on - strand, within Psest_3737 at 3909.594 kb on - strand, within Psest_3737 at 3909.594 kb on - strand, within Psest_3737 at 3909.594 kb on - strand, within Psest_3737 at 3909.647 kb on + strand, within Psest_3737 at 3909.648 kb on - strand, within Psest_3737 at 3909.648 kb on - strand, within Psest_3737 at 3909.974 kb on + strand, within Psest_3737
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 3,907,644 - -0.1 3,907,644 - +0.6 3,907,644 - +0.4 3,907,644 - -0.3 3,907,704 + -0.0 3,907,704 + +0.2 3,907,705 - +0.5 3,907,747 + -0.5 3,907,747 + -0.2 3,907,748 - -0.7 3,907,748 - -0.2 3,907,765 + +0.1 3,907,765 + +0.6 3,907,765 + +0.7 3,907,765 + +0.1 3,907,765 + -0.1 3,907,765 + +1.0 3,907,765 + +0.1 3,907,765 + +1.4 3,907,766 - +1.2 3,907,766 - +0.5 3,907,766 - -0.1 3,907,766 - -0.0 3,907,766 - +1.3 3,907,766 - +0.8 3,907,766 - -1.5 3,907,766 - +0.2 3,907,766 - +0.8 3,908,284 + Psest_3734 0.87 -1.1 3,908,284 + Psest_3734 0.87 +0.3 3,908,284 + Psest_3734 0.87 +0.0 3,908,284 + Psest_3734 0.87 -0.3 3,908,284 + Psest_3734 0.87 +0.2 3,908,284 + Psest_3734 0.87 +0.6 3,908,284 + Psest_3734 0.87 +0.5 3,908,284 + Psest_3734 0.87 -0.3 3,908,284 + Psest_3734 0.87 -0.0 3,908,284 + Psest_3734 0.87 +0.4 3,908,284 + Psest_3734 0.87 +0.3 3,908,284 + Psest_3734 0.87 +0.5 3,908,284 + Psest_3734 0.87 -0.6 3,908,284 + Psest_3734 0.87 +0.0 3,908,284 + Psest_3734 0.87 +0.8 3,908,285 - Psest_3734 0.87 +0.2 3,908,285 - Psest_3734 0.87 -0.2 3,908,285 - Psest_3734 0.87 +0.0 3,908,285 - Psest_3734 0.87 +0.6 3,908,285 - Psest_3734 0.87 +0.3 3,908,285 - Psest_3734 0.87 -0.0 3,908,285 - Psest_3734 0.87 +0.1 3,908,285 - Psest_3734 0.87 -1.1 3,908,285 - Psest_3734 0.87 -0.9 3,908,285 - Psest_3734 0.87 -0.7 3,908,285 - Psest_3734 0.87 +0.5 3,908,285 - Psest_3734 0.87 -0.1 3,908,285 - Psest_3734 0.87 -0.5 3,908,285 - Psest_3734 0.87 -0.5 3,908,285 - Psest_3734 0.87 +0.1 3,908,285 - Psest_3734 0.87 -0.1 3,908,285 - Psest_3734 0.87 +0.9 3,908,326 + -1.1 3,908,326 + +0.4 3,908,326 + +0.4 3,908,326 + +0.2 3,908,326 + +0.9 3,908,326 + +0.6 3,908,326 + +1.4 3,908,327 - +1.0 3,908,839 + Psest_3735 0.69 +1.7 3,908,840 - Psest_3735 0.69 +1.0 3,908,958 - -0.3 3,908,971 + +0.2 3,908,971 + -1.8 3,908,971 + +0.9 3,908,972 - -0.2 3,908,972 - -0.2 3,908,972 - -0.5 3,908,972 - +0.8 3,908,972 - -0.3 3,908,972 - +0.2 3,908,972 - +0.2 3,908,972 - +0.1 3,909,305 + Psest_3736 0.69 -0.0 3,909,306 - Psest_3736 0.69 +0.3 3,909,306 - Psest_3736 0.69 +0.4 3,909,464 - -0.3 3,909,464 - +0.2 3,909,593 + Psest_3737 0.21 +0.8 3,909,593 + Psest_3737 0.21 -0.3 3,909,593 + Psest_3737 0.21 -0.1 3,909,594 - Psest_3737 0.21 -1.0 3,909,594 - Psest_3737 0.21 +0.1 3,909,594 - Psest_3737 0.21 -0.8 3,909,594 - Psest_3737 0.21 +0.1 3,909,594 - Psest_3737 0.21 +0.7 3,909,594 - Psest_3737 0.21 -0.2 3,909,647 + Psest_3737 0.30 +0.0 3,909,648 - Psest_3737 0.30 -0.6 3,909,648 - Psest_3737 0.30 -0.2 3,909,974 + Psest_3737 0.81 +0.9
Or see this region's nucleotide sequence