Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3710

Experiment: L-Glutamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPsest_3709 and Psest_3710 are separated by 139 nucleotidesPsest_3710 and Psest_3711 are separated by 107 nucleotides Psest_3709: Psest_3709 - uroporphyrinogen decarboxylase, at 3,872,288 to 3,873,352 _3709 Psest_3710: Psest_3710 - glutamate synthase small subunit family protein, proteobacterial, at 3,873,492 to 3,874,910 _3710 Psest_3711: Psest_3711 - Glutamate synthase domain 2, at 3,875,018 to 3,879,466 _3711 Position (kb) 3873 3874 3875Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 3873.369 kb on - strandat 3873.369 kb on - strandat 3873.429 kb on + strandat 3873.429 kb on + strandat 3873.430 kb on - strandat 3873.430 kb on - strandat 3873.430 kb on - strandat 3873.505 kb on + strandat 3873.626 kb on + strandat 3873.900 kb on - strand, within Psest_3710at 3873.900 kb on - strand, within Psest_3710at 3874.029 kb on + strand, within Psest_3710at 3874.130 kb on - strand, within Psest_3710at 3874.171 kb on + strand, within Psest_3710at 3874.171 kb on + strand, within Psest_3710at 3874.171 kb on + strand, within Psest_3710at 3874.171 kb on + strand, within Psest_3710at 3874.171 kb on + strand, within Psest_3710at 3874.171 kb on + strand, within Psest_3710at 3874.171 kb on + strand, within Psest_3710at 3874.171 kb on + strand, within Psest_3710at 3874.171 kb on + strand, within Psest_3710at 3874.171 kb on + strand, within Psest_3710at 3874.171 kb on + strand, within Psest_3710at 3874.171 kb on + strand, within Psest_3710at 3874.171 kb on + strand, within Psest_3710at 3874.172 kb on - strand, within Psest_3710at 3874.172 kb on - strand, within Psest_3710at 3874.172 kb on - strand, within Psest_3710at 3874.172 kb on - strand, within Psest_3710at 3874.172 kb on - strand, within Psest_3710at 3874.172 kb on - strand, within Psest_3710at 3874.172 kb on - strand, within Psest_3710at 3874.172 kb on - strand, within Psest_3710at 3874.172 kb on - strand, within Psest_3710at 3874.172 kb on - strand, within Psest_3710at 3874.172 kb on - strand, within Psest_3710at 3874.172 kb on - strand, within Psest_3710at 3874.172 kb on - strand, within Psest_3710at 3874.172 kb on - strand, within Psest_3710at 3874.175 kb on + strand, within Psest_3710at 3874.175 kb on + strand, within Psest_3710at 3874.175 kb on + strand, within Psest_3710at 3874.175 kb on + strand, within Psest_3710at 3874.175 kb on + strand, within Psest_3710at 3874.175 kb on + strand, within Psest_3710at 3874.176 kb on - strand, within Psest_3710at 3874.176 kb on - strand, within Psest_3710at 3874.176 kb on - strand, within Psest_3710at 3874.176 kb on - strand, within Psest_3710at 3874.177 kb on + strand, within Psest_3710at 3874.177 kb on + strand, within Psest_3710at 3874.177 kb on + strand, within Psest_3710at 3874.177 kb on + strand, within Psest_3710at 3874.177 kb on + strand, within Psest_3710at 3874.177 kb on + strand, within Psest_3710at 3874.177 kb on + strand, within Psest_3710at 3874.177 kb on + strand, within Psest_3710at 3874.177 kb on + strand, within Psest_3710at 3874.177 kb on + strand, within Psest_3710at 3874.177 kb on + strand, within Psest_3710at 3874.177 kb on + strand, within Psest_3710at 3874.177 kb on + strand, within Psest_3710at 3874.177 kb on + strand, within Psest_3710at 3874.177 kb on + strand, within Psest_3710at 3874.177 kb on + strand, within Psest_3710at 3874.177 kb on + strand, within Psest_3710at 3874.177 kb on + strand, within Psest_3710at 3874.177 kb on + strand, within Psest_3710at 3874.178 kb on - strand, within Psest_3710at 3874.178 kb on - strand, within Psest_3710at 3874.178 kb on - strand, within Psest_3710at 3874.178 kb on - strand, within Psest_3710at 3874.178 kb on - strand, within Psest_3710at 3874.178 kb on - strand, within Psest_3710at 3874.178 kb on - strand, within Psest_3710at 3874.178 kb on - strand, within Psest_3710at 3874.178 kb on - strand, within Psest_3710at 3874.178 kb on - strand, within Psest_3710at 3874.178 kb on - strand, within Psest_3710at 3874.178 kb on - strand, within Psest_3710at 3874.178 kb on - strand, within Psest_3710at 3874.178 kb on - strand, within Psest_3710at 3874.308 kb on + strand, within Psest_3710at 3874.308 kb on + strand, within Psest_3710at 3874.308 kb on + strand, within Psest_3710at 3874.309 kb on - strand, within Psest_3710at 3874.309 kb on - strand, within Psest_3710at 3874.393 kb on - strand, within Psest_3710at 3874.528 kb on + strand, within Psest_3710at 3874.528 kb on + strand, within Psest_3710at 3874.528 kb on + strand, within Psest_3710at 3874.528 kb on + strand, within Psest_3710at 3874.528 kb on + strand, within Psest_3710at 3874.528 kb on + strand, within Psest_3710at 3874.528 kb on + strand, within Psest_3710at 3874.528 kb on + strand, within Psest_3710at 3874.529 kb on - strand, within Psest_3710at 3874.529 kb on - strand, within Psest_3710at 3874.529 kb on - strand, within Psest_3710at 3874.529 kb on - strand, within Psest_3710at 3874.529 kb on - strand, within Psest_3710at 3874.711 kb on + strand, within Psest_3710at 3874.711 kb on + strand, within Psest_3710at 3874.711 kb on + strand, within Psest_3710at 3874.711 kb on + strand, within Psest_3710at 3874.711 kb on + strand, within Psest_3710at 3874.711 kb on + strand, within Psest_3710at 3874.711 kb on + strand, within Psest_3710at 3874.712 kb on - strand, within Psest_3710at 3874.712 kb on - strand, within Psest_3710at 3874.712 kb on - strand, within Psest_3710at 3874.712 kb on - strand, within Psest_3710at 3874.807 kb on + strandat 3874.808 kb on - strandat 3874.808 kb on - strandat 3874.942 kb on + strandat 3874.943 kb on - strandat 3874.943 kb on - strandat 3874.943 kb on - strandat 3874.943 kb on - strandat 3874.943 kb on - strandat 3874.943 kb on - strandat 3874.943 kb on - strandat 3874.943 kb on - strandat 3874.943 kb on - strandat 3874.943 kb on - strandat 3874.946 kb on + strandat 3874.946 kb on + strandat 3874.946 kb on + strandat 3874.947 kb on - strandat 3874.947 kb on - strandat 3875.100 kb on + strandat 3875.101 kb on - strandat 3875.157 kb on + strandat 3875.157 kb on + strandat 3875.157 kb on + strandat 3875.157 kb on + strandat 3875.157 kb on + strandat 3875.157 kb on + strandat 3875.158 kb on - strandat 3875.158 kb on - strandat 3875.358 kb on + strandat 3875.358 kb on + strandat 3875.358 kb on + strandat 3875.358 kb on + strandat 3875.358 kb on + strandat 3875.359 kb on - strandat 3875.359 kb on - strandat 3875.359 kb on - strandat 3875.472 kb on + strand, within Psest_3711at 3875.474 kb on + strand, within Psest_3711at 3875.474 kb on + strand, within Psest_3711at 3875.474 kb on + strand, within Psest_3711at 3875.474 kb on + strand, within Psest_3711at 3875.474 kb on + strand, within Psest_3711at 3875.474 kb on + strand, within Psest_3711at 3875.474 kb on + strand, within Psest_3711at 3875.474 kb on + strand, within Psest_3711at 3875.474 kb on + strand, within Psest_3711at 3875.474 kb on + strand, within Psest_3711at 3875.474 kb on + strand, within Psest_3711at 3875.474 kb on + strand, within Psest_3711at 3875.474 kb on + strand, within Psest_3711at 3875.474 kb on + strand, within Psest_3711at 3875.475 kb on - strand, within Psest_3711at 3875.475 kb on - strand, within Psest_3711at 3875.475 kb on - strand, within Psest_3711at 3875.475 kb on - strand, within Psest_3711at 3875.475 kb on - strand, within Psest_3711at 3875.475 kb on - strand, within Psest_3711at 3875.475 kb on - strand, within Psest_3711at 3875.574 kb on + strand, within Psest_3711at 3875.598 kb on + strand, within Psest_3711at 3875.598 kb on + strand, within Psest_3711at 3875.599 kb on - strand, within Psest_3711at 3875.599 kb on - strand, within Psest_3711

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (N)
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3,873,369 - -0.7
3,873,369 - +0.3
3,873,429 + -0.1
3,873,429 + +0.1
3,873,430 - +0.3
3,873,430 - +0.5
3,873,430 - -0.4
3,873,505 + -1.1
3,873,626 + -1.0
3,873,900 - Psest_3710 0.29 -2.0
3,873,900 - Psest_3710 0.29 -1.8
3,874,029 + Psest_3710 0.38 -2.6
3,874,130 - Psest_3710 0.45 -2.5
3,874,171 + Psest_3710 0.48 -0.8
3,874,171 + Psest_3710 0.48 -3.5
3,874,171 + Psest_3710 0.48 -2.9
3,874,171 + Psest_3710 0.48 -2.6
3,874,171 + Psest_3710 0.48 -1.6
3,874,171 + Psest_3710 0.48 -0.8
3,874,171 + Psest_3710 0.48 -0.3
3,874,171 + Psest_3710 0.48 +0.2
3,874,171 + Psest_3710 0.48 -0.6
3,874,171 + Psest_3710 0.48 -1.1
3,874,171 + Psest_3710 0.48 -0.8
3,874,171 + Psest_3710 0.48 -2.1
3,874,171 + Psest_3710 0.48 -1.6
3,874,172 - Psest_3710 0.48 -1.9
3,874,172 - Psest_3710 0.48 -2.1
3,874,172 - Psest_3710 0.48 +0.2
3,874,172 - Psest_3710 0.48 -1.3
3,874,172 - Psest_3710 0.48 -1.9
3,874,172 - Psest_3710 0.48 -1.7
3,874,172 - Psest_3710 0.48 -2.2
3,874,172 - Psest_3710 0.48 -2.0
3,874,172 - Psest_3710 0.48 -1.9
3,874,172 - Psest_3710 0.48 -1.8
3,874,172 - Psest_3710 0.48 -1.4
3,874,172 - Psest_3710 0.48 -1.3
3,874,172 - Psest_3710 0.48 -2.2
3,874,172 - Psest_3710 0.48 -1.2
3,874,175 + Psest_3710 0.48 -1.9
3,874,175 + Psest_3710 0.48 -3.2
3,874,175 + Psest_3710 0.48 -2.8
3,874,175 + Psest_3710 0.48 -1.6
3,874,175 + Psest_3710 0.48 +0.2
3,874,175 + Psest_3710 0.48 -1.5
3,874,176 - Psest_3710 0.48 -1.8
3,874,176 - Psest_3710 0.48 +0.1
3,874,176 - Psest_3710 0.48 -2.6
3,874,176 - Psest_3710 0.48 -4.0
3,874,177 + Psest_3710 0.48 -1.3
3,874,177 + Psest_3710 0.48 -2.5
3,874,177 + Psest_3710 0.48 -0.6
3,874,177 + Psest_3710 0.48 -0.9
3,874,177 + Psest_3710 0.48 +1.2
3,874,177 + Psest_3710 0.48 -1.3
3,874,177 + Psest_3710 0.48 -2.2
3,874,177 + Psest_3710 0.48 -2.1
3,874,177 + Psest_3710 0.48 -0.6
3,874,177 + Psest_3710 0.48 -1.8
3,874,177 + Psest_3710 0.48 -0.6
3,874,177 + Psest_3710 0.48 -0.9
3,874,177 + Psest_3710 0.48 -1.8
3,874,177 + Psest_3710 0.48 -0.9
3,874,177 + Psest_3710 0.48 -0.3
3,874,177 + Psest_3710 0.48 -1.3
3,874,177 + Psest_3710 0.48 -2.1
3,874,177 + Psest_3710 0.48 -0.3
3,874,177 + Psest_3710 0.48 -1.1
3,874,178 - Psest_3710 0.48 -1.9
3,874,178 - Psest_3710 0.48 -2.5
3,874,178 - Psest_3710 0.48 -0.8
3,874,178 - Psest_3710 0.48 -1.8
3,874,178 - Psest_3710 0.48 -2.5
3,874,178 - Psest_3710 0.48 -2.2
3,874,178 - Psest_3710 0.48 -2.3
3,874,178 - Psest_3710 0.48 -2.3
3,874,178 - Psest_3710 0.48 -1.6
3,874,178 - Psest_3710 0.48 -1.8
3,874,178 - Psest_3710 0.48 -2.1
3,874,178 - Psest_3710 0.48 -2.0
3,874,178 - Psest_3710 0.48 +0.6
3,874,178 - Psest_3710 0.48 -1.6
3,874,308 + Psest_3710 0.58 -0.8
3,874,308 + Psest_3710 0.58 -2.7
3,874,308 + Psest_3710 0.58 -1.6
3,874,309 - Psest_3710 0.58 -2.7
3,874,309 - Psest_3710 0.58 -0.9
3,874,393 - Psest_3710 0.63 -1.8
3,874,528 + Psest_3710 0.73 -2.1
3,874,528 + Psest_3710 0.73 -1.1
3,874,528 + Psest_3710 0.73 -0.3
3,874,528 + Psest_3710 0.73 -1.3
3,874,528 + Psest_3710 0.73 -2.6
3,874,528 + Psest_3710 0.73 -2.3
3,874,528 + Psest_3710 0.73 -3.9
3,874,528 + Psest_3710 0.73 +0.8
3,874,529 - Psest_3710 0.73 -0.1
3,874,529 - Psest_3710 0.73 -1.2
3,874,529 - Psest_3710 0.73 -1.8
3,874,529 - Psest_3710 0.73 -2.5
3,874,529 - Psest_3710 0.73 -1.8
3,874,711 + Psest_3710 0.86 -2.3
3,874,711 + Psest_3710 0.86 -0.3
3,874,711 + Psest_3710 0.86 -0.2
3,874,711 + Psest_3710 0.86 -1.9
3,874,711 + Psest_3710 0.86 -0.3
3,874,711 + Psest_3710 0.86 -3.8
3,874,711 + Psest_3710 0.86 -1.9
3,874,712 - Psest_3710 0.86 -3.9
3,874,712 - Psest_3710 0.86 -1.1
3,874,712 - Psest_3710 0.86 -0.8
3,874,712 - Psest_3710 0.86 -1.6
3,874,807 + -3.0
3,874,808 - -2.5
3,874,808 - -2.6
3,874,942 + -2.6
3,874,943 - -0.9
3,874,943 - +0.8
3,874,943 - +1.2
3,874,943 - -0.7
3,874,943 - +0.4
3,874,943 - +1.7
3,874,943 - -0.5
3,874,943 - +1.0
3,874,943 - +0.0
3,874,943 - -1.0
3,874,946 + -1.9
3,874,946 + -0.3
3,874,946 + -3.3
3,874,947 - +1.8
3,874,947 - -0.5
3,875,100 + -1.3
3,875,101 - +0.5
3,875,157 + -2.8
3,875,157 + -1.9
3,875,157 + -1.9
3,875,157 + -1.5
3,875,157 + -0.9
3,875,157 + -4.2
3,875,158 - -1.6
3,875,158 - -3.6
3,875,358 + +0.2
3,875,358 + -1.3
3,875,358 + -0.5
3,875,358 + -1.8
3,875,358 + -1.1
3,875,359 - -1.3
3,875,359 - -1.8
3,875,359 - -0.8
3,875,472 + Psest_3711 0.10 -1.1
3,875,474 + Psest_3711 0.10 -0.3
3,875,474 + Psest_3711 0.10 -0.5
3,875,474 + Psest_3711 0.10 -1.1
3,875,474 + Psest_3711 0.10 -1.3
3,875,474 + Psest_3711 0.10 -1.6
3,875,474 + Psest_3711 0.10 -1.0
3,875,474 + Psest_3711 0.10 -2.7
3,875,474 + Psest_3711 0.10 -2.0
3,875,474 + Psest_3711 0.10 -1.9
3,875,474 + Psest_3711 0.10 -0.2
3,875,474 + Psest_3711 0.10 -3.2
3,875,474 + Psest_3711 0.10 -1.8
3,875,474 + Psest_3711 0.10 -1.7
3,875,474 + Psest_3711 0.10 -1.7
3,875,475 - Psest_3711 0.10 -1.2
3,875,475 - Psest_3711 0.10 -3.3
3,875,475 - Psest_3711 0.10 -2.3
3,875,475 - Psest_3711 0.10 -2.2
3,875,475 - Psest_3711 0.10 -1.3
3,875,475 - Psest_3711 0.10 -3.1
3,875,475 - Psest_3711 0.10 -2.3
3,875,574 + Psest_3711 0.12 -0.3
3,875,598 + Psest_3711 0.13 -0.0
3,875,598 + Psest_3711 0.13 -0.9
3,875,599 - Psest_3711 0.13 -2.9
3,875,599 - Psest_3711 0.13 -3.3

Or see this region's nucleotide sequence