Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3689 and Psest_3690 are separated by 12 nucleotides Psest_3690 and Psest_3691 are separated by 49 nucleotides Psest_3691 and Psest_3692 overlap by 4 nucleotides Psest_3692 and Psest_3693 overlap by 4 nucleotides Psest_3693 and Psest_3694 overlap by 4 nucleotides
Psest_3689: Psest_3689 - Acyl carrier protein, at 3,854,159 to 3,854,422
_3689
Psest_3690: Psest_3690 - Acyl carrier protein, at 3,854,435 to 3,854,692
_3690
Psest_3691: Psest_3691 - Predicted membrane protein, at 3,854,742 to 3,855,317
_3691
Psest_3692: Psest_3692 - Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases, at 3,855,314 to 3,856,990
_3692
Psest_3693: Psest_3693 - Glycosyltransferases involved in cell wall biogenesis, at 3,856,987 to 3,857,802
_3693
Psest_3694: Psest_3694 - Predicted acyltransferase, at 3,857,799 to 3,858,743
_3694
Position (kb)
3855
3856
3857 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3854.531 kb on + strand, within Psest_3690 at 3854.531 kb on + strand, within Psest_3690 at 3854.532 kb on - strand, within Psest_3690 at 3854.582 kb on - strand, within Psest_3690 at 3854.649 kb on + strand, within Psest_3690 at 3854.649 kb on + strand, within Psest_3690 at 3854.649 kb on + strand, within Psest_3690 at 3854.650 kb on - strand, within Psest_3690 at 3854.650 kb on - strand, within Psest_3690 at 3854.650 kb on - strand, within Psest_3690 at 3854.650 kb on - strand, within Psest_3690 at 3854.785 kb on + strand at 3854.785 kb on + strand at 3854.786 kb on - strand at 3854.835 kb on + strand, within Psest_3691 at 3854.836 kb on - strand, within Psest_3691 at 3854.978 kb on - strand, within Psest_3691 at 3855.130 kb on - strand, within Psest_3691 at 3855.131 kb on + strand, within Psest_3691 at 3855.131 kb on + strand, within Psest_3691 at 3855.131 kb on + strand, within Psest_3691 at 3855.231 kb on + strand, within Psest_3691 at 3855.232 kb on - strand, within Psest_3691 at 3855.232 kb on - strand, within Psest_3691 at 3855.232 kb on - strand, within Psest_3691 at 3855.232 kb on - strand, within Psest_3691 at 3855.232 kb on - strand, within Psest_3691 at 3855.232 kb on - strand, within Psest_3691 at 3855.232 kb on - strand, within Psest_3691 at 3855.339 kb on + strand at 3855.339 kb on + strand at 3855.339 kb on + strand at 3855.340 kb on - strand at 3855.531 kb on + strand, within Psest_3692 at 3855.531 kb on + strand, within Psest_3692 at 3855.833 kb on + strand, within Psest_3692 at 3855.834 kb on - strand, within Psest_3692 at 3856.106 kb on + strand, within Psest_3692 at 3856.107 kb on - strand, within Psest_3692 at 3856.107 kb on - strand, within Psest_3692 at 3856.424 kb on + strand, within Psest_3692 at 3856.887 kb on + strand at 3856.888 kb on - strand at 3856.888 kb on - strand at 3856.888 kb on - strand at 3856.888 kb on - strand at 3856.922 kb on + strand at 3856.922 kb on + strand at 3856.922 kb on + strand at 3856.923 kb on - strand at 3856.923 kb on - strand at 3856.931 kb on + strand at 3857.016 kb on - strand at 3857.016 kb on - strand at 3857.098 kb on + strand, within Psest_3693 at 3857.099 kb on - strand, within Psest_3693 at 3857.922 kb on + strand, within Psest_3694 at 3857.923 kb on - strand, within Psest_3694 at 3857.937 kb on + strand, within Psest_3694 at 3857.937 kb on + strand, within Psest_3694 at 3857.938 kb on - strand, within Psest_3694 at 3857.938 kb on - strand, within Psest_3694 at 3857.943 kb on + strand, within Psest_3694 at 3857.943 kb on + strand, within Psest_3694 at 3857.983 kb on - strand, within Psest_3694 at 3857.983 kb on - strand, within Psest_3694
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 3,854,531 + Psest_3690 0.37 +0.6 3,854,531 + Psest_3690 0.37 +0.2 3,854,532 - Psest_3690 0.38 -0.4 3,854,582 - Psest_3690 0.57 +0.8 3,854,649 + Psest_3690 0.83 +1.2 3,854,649 + Psest_3690 0.83 +1.8 3,854,649 + Psest_3690 0.83 -0.2 3,854,650 - Psest_3690 0.83 -0.3 3,854,650 - Psest_3690 0.83 +0.1 3,854,650 - Psest_3690 0.83 +0.0 3,854,650 - Psest_3690 0.83 +0.2 3,854,785 + +0.9 3,854,785 + -2.1 3,854,786 - -0.4 3,854,835 + Psest_3691 0.16 -1.5 3,854,836 - Psest_3691 0.16 +0.6 3,854,978 - Psest_3691 0.41 -0.8 3,855,130 - Psest_3691 0.67 +1.3 3,855,131 + Psest_3691 0.68 +2.0 3,855,131 + Psest_3691 0.68 +2.2 3,855,131 + Psest_3691 0.68 +1.2 3,855,231 + Psest_3691 0.85 -0.8 3,855,232 - Psest_3691 0.85 -0.3 3,855,232 - Psest_3691 0.85 +0.2 3,855,232 - Psest_3691 0.85 +1.3 3,855,232 - Psest_3691 0.85 -1.4 3,855,232 - Psest_3691 0.85 +0.4 3,855,232 - Psest_3691 0.85 +0.2 3,855,232 - Psest_3691 0.85 +0.3 3,855,339 + +1.4 3,855,339 + +1.2 3,855,339 + +0.0 3,855,340 - +0.8 3,855,531 + Psest_3692 0.13 +1.2 3,855,531 + Psest_3692 0.13 +1.2 3,855,833 + Psest_3692 0.31 +2.2 3,855,834 - Psest_3692 0.31 -0.1 3,856,106 + Psest_3692 0.47 +0.6 3,856,107 - Psest_3692 0.47 +0.4 3,856,107 - Psest_3692 0.47 +1.2 3,856,424 + Psest_3692 0.66 +0.3 3,856,887 + +1.4 3,856,888 - +0.4 3,856,888 - -1.1 3,856,888 - -0.9 3,856,888 - -0.1 3,856,922 + +0.5 3,856,922 + +1.2 3,856,922 + +0.9 3,856,923 - +1.5 3,856,923 - -0.4 3,856,931 + +0.7 3,857,016 - +2.2 3,857,016 - +1.2 3,857,098 + Psest_3693 0.14 -0.1 3,857,099 - Psest_3693 0.14 -0.6 3,857,922 + Psest_3694 0.13 +0.8 3,857,923 - Psest_3694 0.13 +2.2 3,857,937 + Psest_3694 0.15 +0.2 3,857,937 + Psest_3694 0.15 +1.2 3,857,938 - Psest_3694 0.15 +1.2 3,857,938 - Psest_3694 0.15 +0.0 3,857,943 + Psest_3694 0.15 +0.6 3,857,943 + Psest_3694 0.15 +2.6 3,857,983 - Psest_3694 0.19 +0.4 3,857,983 - Psest_3694 0.19 +0.2
Or see this region's nucleotide sequence