Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3553 and Psest_3554 are separated by 112 nucleotides Psest_3554 and Psest_3555 overlap by 4 nucleotides Psest_3555 and Psest_3556 are separated by 16 nucleotides Psest_3556 and Psest_3557 are separated by 29 nucleotides Psest_3557 and Psest_3558 overlap by 32 nucleotides
Psest_3552: Psest_3552 - riboflavin biosynthesis protein RibD, at 3,730,904 to 3,732,004
_3552
Psest_3553: Psest_3553 - transcriptional regulator NrdR, at 3,732,001 to 3,732,468
_3553
Psest_3554: Psest_3554 - Uncharacterized protein conserved in bacteria, at 3,732,581 to 3,733,006
_3554
Psest_3555: Psest_3555 - Predicted methyltransferase, at 3,733,003 to 3,733,656
_3555
Psest_3556: Psest_3556 - 2'-5' RNA ligase, at 3,733,673 to 3,734,194
_3556
Psest_3557: Psest_3557 - Predicted redox protein, regulator of disulfide bond formation, at 3,734,224 to 3,734,463
_3557
Psest_3558: Psest_3558 - Predicted transporter component, at 3,734,432 to 3,735,658
_3558
Position (kb)
3733
3734 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3732.546 kb on + strand at 3732.546 kb on + strand at 3732.546 kb on + strand at 3732.546 kb on + strand at 3732.546 kb on + strand at 3732.546 kb on + strand at 3732.547 kb on - strand at 3732.547 kb on - strand at 3732.547 kb on - strand at 3732.547 kb on - strand at 3732.548 kb on + strand at 3732.548 kb on + strand at 3732.548 kb on + strand at 3732.548 kb on + strand at 3732.548 kb on + strand at 3732.548 kb on + strand at 3732.548 kb on + strand at 3732.548 kb on + strand at 3732.548 kb on + strand at 3732.548 kb on + strand at 3732.548 kb on + strand at 3732.548 kb on + strand at 3732.548 kb on + strand at 3732.548 kb on + strand at 3732.549 kb on - strand at 3732.549 kb on - strand at 3732.549 kb on - strand at 3732.549 kb on - strand at 3732.549 kb on - strand at 3732.549 kb on - strand at 3732.549 kb on - strand at 3732.549 kb on - strand at 3732.549 kb on - strand at 3732.549 kb on - strand at 3732.549 kb on - strand at 3732.549 kb on - strand at 3732.549 kb on - strand at 3732.549 kb on - strand at 3732.549 kb on - strand at 3732.549 kb on - strand at 3732.603 kb on + strand at 3732.603 kb on + strand at 3732.603 kb on + strand at 3732.604 kb on - strand at 3732.604 kb on - strand at 3732.949 kb on + strand, within Psest_3554 at 3732.949 kb on + strand, within Psest_3554 at 3732.949 kb on + strand, within Psest_3554 at 3732.950 kb on - strand, within Psest_3554 at 3732.950 kb on - strand, within Psest_3554 at 3732.950 kb on - strand, within Psest_3554 at 3733.067 kb on + strand at 3733.068 kb on - strand at 3733.119 kb on + strand, within Psest_3555 at 3733.394 kb on + strand, within Psest_3555 at 3733.394 kb on + strand, within Psest_3555 at 3733.395 kb on - strand, within Psest_3555 at 3733.395 kb on - strand, within Psest_3555 at 3733.433 kb on - strand, within Psest_3555 at 3733.462 kb on + strand, within Psest_3555 at 3733.463 kb on - strand, within Psest_3555 at 3733.561 kb on + strand, within Psest_3555 at 3733.654 kb on + strand at 3733.655 kb on - strand at 3733.948 kb on + strand, within Psest_3556 at 3733.948 kb on + strand, within Psest_3556 at 3733.948 kb on + strand, within Psest_3556 at 3733.948 kb on + strand, within Psest_3556 at 3733.948 kb on + strand, within Psest_3556 at 3733.949 kb on - strand, within Psest_3556 at 3733.949 kb on - strand, within Psest_3556 at 3733.962 kb on + strand, within Psest_3556 at 3733.962 kb on + strand, within Psest_3556 at 3733.963 kb on - strand, within Psest_3556 at 3734.011 kb on - strand, within Psest_3556 at 3734.137 kb on + strand, within Psest_3556 at 3734.156 kb on + strand at 3734.156 kb on + strand at 3734.157 kb on - strand at 3734.234 kb on - strand at 3734.288 kb on + strand, within Psest_3557 at 3734.289 kb on - strand, within Psest_3557 at 3734.395 kb on - strand, within Psest_3557 at 3734.407 kb on - strand, within Psest_3557 at 3734.407 kb on - strand, within Psest_3557 at 3734.408 kb on + strand, within Psest_3557 at 3734.408 kb on + strand, within Psest_3557 at 3734.409 kb on - strand, within Psest_3557 at 3734.409 kb on - strand, within Psest_3557 at 3734.428 kb on + strand, within Psest_3557 at 3734.428 kb on + strand, within Psest_3557 at 3734.428 kb on + strand, within Psest_3557 at 3734.428 kb on + strand, within Psest_3557 at 3734.428 kb on + strand, within Psest_3557 at 3734.428 kb on + strand, within Psest_3557 at 3734.429 kb on - strand, within Psest_3557 at 3734.429 kb on - strand, within Psest_3557 at 3734.429 kb on - strand, within Psest_3557 at 3734.632 kb on - strand, within Psest_3558
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 3,732,546 + +1.2 3,732,546 + +0.5 3,732,546 + +0.6 3,732,546 + +1.5 3,732,546 + +1.6 3,732,546 + +2.2 3,732,547 - +0.6 3,732,547 - +0.1 3,732,547 - -0.4 3,732,547 - -0.5 3,732,548 + +0.4 3,732,548 + +0.6 3,732,548 + +2.2 3,732,548 + -0.1 3,732,548 + +1.4 3,732,548 + +0.4 3,732,548 + -1.1 3,732,548 + -1.7 3,732,548 + +0.2 3,732,548 + +0.9 3,732,548 + +0.2 3,732,548 + -0.1 3,732,548 + -0.8 3,732,548 + +1.2 3,732,549 - -0.4 3,732,549 - +0.7 3,732,549 - -0.2 3,732,549 - +0.6 3,732,549 - -0.1 3,732,549 - -0.4 3,732,549 - +0.2 3,732,549 - +0.2 3,732,549 - -0.8 3,732,549 - +0.9 3,732,549 - +0.0 3,732,549 - +0.2 3,732,549 - +0.6 3,732,549 - +0.8 3,732,549 - +1.2 3,732,549 - +0.6 3,732,603 + -0.1 3,732,603 + -0.4 3,732,603 + -0.2 3,732,604 - -0.1 3,732,604 - +2.0 3,732,949 + Psest_3554 0.86 +3.2 3,732,949 + Psest_3554 0.86 +2.2 3,732,949 + Psest_3554 0.86 +0.4 3,732,950 - Psest_3554 0.87 -0.8 3,732,950 - Psest_3554 0.87 +0.5 3,732,950 - Psest_3554 0.87 +1.2 3,733,067 + +1.2 3,733,068 - +0.2 3,733,119 + Psest_3555 0.18 +2.5 3,733,394 + Psest_3555 0.60 +0.3 3,733,394 + Psest_3555 0.60 +0.1 3,733,395 - Psest_3555 0.60 +0.5 3,733,395 - Psest_3555 0.60 +1.2 3,733,433 - Psest_3555 0.66 +1.8 3,733,462 + Psest_3555 0.70 +1.2 3,733,463 - Psest_3555 0.70 +0.2 3,733,561 + Psest_3555 0.85 -0.8 3,733,654 + +0.2 3,733,655 - +1.2 3,733,948 + Psest_3556 0.53 +0.1 3,733,948 + Psest_3556 0.53 -0.6 3,733,948 + Psest_3556 0.53 +1.1 3,733,948 + Psest_3556 0.53 +1.5 3,733,948 + Psest_3556 0.53 +1.0 3,733,949 - Psest_3556 0.53 +0.6 3,733,949 - Psest_3556 0.53 -2.0 3,733,962 + Psest_3556 0.55 -0.8 3,733,962 + Psest_3556 0.55 +0.3 3,733,963 - Psest_3556 0.56 +0.4 3,734,011 - Psest_3556 0.65 +2.2 3,734,137 + Psest_3556 0.89 -0.4 3,734,156 + +0.2 3,734,156 + -1.1 3,734,157 - -0.4 3,734,234 - -0.8 3,734,288 + Psest_3557 0.27 +0.7 3,734,289 - Psest_3557 0.27 +0.1 3,734,395 - Psest_3557 0.71 +0.2 3,734,407 - Psest_3557 0.76 +0.6 3,734,407 - Psest_3557 0.76 +0.5 3,734,408 + Psest_3557 0.77 +0.6 3,734,408 + Psest_3557 0.77 +0.6 3,734,409 - Psest_3557 0.77 +0.3 3,734,409 - Psest_3557 0.77 -1.4 3,734,428 + Psest_3557 0.85 +0.8 3,734,428 + Psest_3557 0.85 -1.8 3,734,428 + Psest_3557 0.85 +0.8 3,734,428 + Psest_3557 0.85 +1.8 3,734,428 + Psest_3557 0.85 +0.7 3,734,428 + Psest_3557 0.85 +1.0 3,734,429 - Psest_3557 0.85 +0.1 3,734,429 - Psest_3557 0.85 +0.4 3,734,429 - Psest_3557 0.85 +2.4 3,734,632 - Psest_3558 0.16 +0.9
Or see this region's nucleotide sequence