Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3445 and Psest_3446 overlap by 4 nucleotides Psest_3446 and Psest_3447 are separated by 198 nucleotides Psest_3447 and Psest_3448 overlap by 8 nucleotides
Psest_3445: Psest_3445 - Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs, at 3,617,125 to 3,618,111
_3445
Psest_3446: Psest_3446 - Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs, at 3,618,108 to 3,618,620
_3446
Psest_3447: Psest_3447 - Uncharacterized MobA-related protein, at 3,618,819 to 3,619,409
_3447
Psest_3448: Psest_3448 - Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family, at 3,619,402 to 3,620,376
_3448
Position (kb)
3618
3619
3620 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3618.038 kb on + strand at 3618.038 kb on + strand at 3618.039 kb on - strand at 3618.095 kb on + strand at 3618.096 kb on - strand at 3618.253 kb on - strand, within Psest_3446 at 3618.607 kb on + strand at 3618.607 kb on + strand at 3618.608 kb on - strand at 3618.671 kb on + strand at 3618.797 kb on + strand at 3619.000 kb on + strand, within Psest_3447 at 3619.069 kb on + strand, within Psest_3447 at 3619.501 kb on - strand, within Psest_3448 at 3619.501 kb on - strand at 3619.625 kb on + strand, within Psest_3448 at 3619.625 kb on + strand, within Psest_3448 at 3619.625 kb on + strand, within Psest_3448 at 3619.625 kb on + strand, within Psest_3448 at 3619.625 kb on + strand, within Psest_3448 at 3619.625 kb on + strand, within Psest_3448 at 3619.626 kb on - strand, within Psest_3448 at 3619.626 kb on - strand, within Psest_3448 at 3619.790 kb on + strand, within Psest_3448 at 3619.791 kb on - strand, within Psest_3448 at 3619.817 kb on - strand, within Psest_3448 at 3619.854 kb on - strand, within Psest_3448 at 3619.920 kb on + strand, within Psest_3448 at 3619.969 kb on + strand, within Psest_3448 at 3619.969 kb on + strand, within Psest_3448 at 3619.969 kb on + strand, within Psest_3448 at 3619.970 kb on - strand, within Psest_3448 at 3619.970 kb on - strand, within Psest_3448 at 3619.970 kb on - strand, within Psest_3448 at 3619.970 kb on - strand, within Psest_3448 at 3619.970 kb on - strand, within Psest_3448 at 3620.135 kb on + strand, within Psest_3448 at 3620.135 kb on + strand, within Psest_3448 at 3620.135 kb on + strand, within Psest_3448 at 3620.136 kb on - strand, within Psest_3448 at 3620.136 kb on - strand, within Psest_3448 at 3620.303 kb on + strand at 3620.304 kb on - strand at 3620.304 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 3,618,038 + -0.4 3,618,038 + -0.8 3,618,039 - -0.5 3,618,095 + -0.6 3,618,096 - +0.9 3,618,253 - Psest_3446 0.28 +0.3 3,618,607 + -0.2 3,618,607 + +1.8 3,618,608 - +0.3 3,618,671 + -0.2 3,618,797 + +0.8 3,619,000 + Psest_3447 0.31 +1.5 3,619,069 + Psest_3447 0.42 +1.2 3,619,501 - Psest_3448 0.10 +0.2 3,619,501 - +2.2 3,619,625 + Psest_3448 0.23 +0.4 3,619,625 + Psest_3448 0.23 -0.8 3,619,625 + Psest_3448 0.23 +1.2 3,619,625 + Psest_3448 0.23 +1.2 3,619,625 + Psest_3448 0.23 +1.5 3,619,625 + Psest_3448 0.23 +0.7 3,619,626 - Psest_3448 0.23 +1.6 3,619,626 - Psest_3448 0.23 +1.6 3,619,790 + Psest_3448 0.40 +0.2 3,619,791 - Psest_3448 0.40 +0.2 3,619,817 - Psest_3448 0.43 -1.8 3,619,854 - Psest_3448 0.46 -0.6 3,619,920 + Psest_3448 0.53 +1.2 3,619,969 + Psest_3448 0.58 +0.4 3,619,969 + Psest_3448 0.58 +0.5 3,619,969 + Psest_3448 0.58 -0.8 3,619,970 - Psest_3448 0.58 +0.2 3,619,970 - Psest_3448 0.58 +3.2 3,619,970 - Psest_3448 0.58 +0.4 3,619,970 - Psest_3448 0.58 -1.0 3,619,970 - Psest_3448 0.58 +1.2 3,620,135 + Psest_3448 0.75 -0.6 3,620,135 + Psest_3448 0.75 +0.8 3,620,135 + Psest_3448 0.75 +0.4 3,620,136 - Psest_3448 0.75 -0.2 3,620,136 - Psest_3448 0.75 +1.8 3,620,303 + +0.4 3,620,304 - +1.3 3,620,304 - -1.3
Or see this region's nucleotide sequence