Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3323 and Psest_3324 are separated by 86 nucleotides Psest_3324 and Psest_3325 are separated by 138 nucleotides Psest_3325 and Psest_3326 overlap by 4 nucleotides
Psest_3323: Psest_3323 - ribonuclease, Rne/Rng family, at 3,488,506 to 3,489,963
_3323
Psest_3324: Psest_3324 - MAF protein, at 3,490,050 to 3,490,640
_3324
Psest_3325: Psest_3325 - rod shape-determining protein MreD, at 3,490,779 to 3,491,267
_3325
Psest_3326: Psest_3326 - rod shape-determining protein MreC, at 3,491,264 to 3,492,217
_3326
Position (kb)
3490
3491 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3489.197 kb on + strand, within Psest_3323 at 3489.347 kb on + strand, within Psest_3323 at 3489.348 kb on - strand, within Psest_3323 at 3489.348 kb on - strand, within Psest_3323 at 3489.596 kb on + strand, within Psest_3323 at 3489.596 kb on + strand, within Psest_3323 at 3489.596 kb on + strand, within Psest_3323 at 3489.596 kb on + strand, within Psest_3323 at 3489.596 kb on + strand, within Psest_3323 at 3489.596 kb on + strand, within Psest_3323 at 3489.596 kb on + strand, within Psest_3323 at 3489.597 kb on - strand, within Psest_3323 at 3489.597 kb on - strand, within Psest_3323 at 3489.597 kb on - strand, within Psest_3323 at 3489.597 kb on - strand, within Psest_3323 at 3489.597 kb on - strand, within Psest_3323 at 3489.839 kb on + strand at 3489.839 kb on + strand at 3489.839 kb on + strand at 3489.839 kb on + strand at 3489.839 kb on + strand at 3489.839 kb on + strand at 3489.839 kb on + strand at 3489.839 kb on + strand at 3489.839 kb on + strand at 3489.839 kb on + strand at 3489.839 kb on + strand at 3489.840 kb on - strand at 3489.840 kb on - strand at 3489.840 kb on - strand at 3489.840 kb on - strand at 3489.840 kb on - strand at 3489.840 kb on - strand at 3489.843 kb on + strand at 3489.844 kb on - strand at 3489.844 kb on - strand at 3489.967 kb on + strand at 3489.967 kb on + strand at 3489.967 kb on + strand at 3489.968 kb on - strand at 3489.998 kb on - strand at 3490.052 kb on - strand at 3490.139 kb on - strand, within Psest_3324 at 3490.139 kb on - strand, within Psest_3324 at 3490.281 kb on + strand, within Psest_3324 at 3490.282 kb on - strand, within Psest_3324 at 3490.282 kb on - strand, within Psest_3324 at 3490.282 kb on - strand, within Psest_3324 at 3490.282 kb on - strand, within Psest_3324 at 3490.440 kb on + strand, within Psest_3324 at 3490.440 kb on + strand, within Psest_3324 at 3490.440 kb on + strand, within Psest_3324 at 3490.441 kb on - strand, within Psest_3324 at 3490.441 kb on - strand, within Psest_3324 at 3490.441 kb on - strand, within Psest_3324 at 3490.441 kb on - strand, within Psest_3324 at 3490.441 kb on - strand, within Psest_3324 at 3490.441 kb on - strand, within Psest_3324 at 3490.441 kb on - strand, within Psest_3324 at 3490.441 kb on - strand, within Psest_3324 at 3490.510 kb on + strand, within Psest_3324 at 3490.510 kb on + strand, within Psest_3324 at 3490.510 kb on + strand, within Psest_3324 at 3490.510 kb on + strand, within Psest_3324 at 3490.510 kb on + strand, within Psest_3324 at 3490.510 kb on + strand, within Psest_3324 at 3490.510 kb on + strand, within Psest_3324 at 3490.511 kb on - strand, within Psest_3324 at 3490.511 kb on - strand, within Psest_3324 at 3490.581 kb on + strand, within Psest_3324 at 3490.581 kb on + strand, within Psest_3324 at 3490.581 kb on + strand, within Psest_3324 at 3490.581 kb on + strand, within Psest_3324 at 3490.582 kb on - strand at 3490.582 kb on - strand at 3490.582 kb on - strand at 3490.582 kb on - strand at 3490.582 kb on - strand at 3490.582 kb on - strand at 3490.582 kb on - strand at 3490.582 kb on - strand at 3490.582 kb on - strand at 3490.582 kb on - strand at 3490.582 kb on - strand at 3490.627 kb on + strand at 3490.627 kb on + strand at 3490.627 kb on + strand at 3490.627 kb on + strand at 3490.627 kb on + strand at 3490.627 kb on + strand at 3490.628 kb on - strand at 3490.628 kb on - strand at 3490.628 kb on - strand at 3490.628 kb on - strand at 3490.628 kb on - strand at 3490.658 kb on - strand at 3490.658 kb on - strand at 3490.662 kb on - strand at 3490.662 kb on - strand at 3490.662 kb on - strand at 3490.662 kb on - strand at 3490.662 kb on - strand at 3490.662 kb on - strand at 3490.715 kb on + strand at 3490.715 kb on + strand at 3490.783 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 3,489,197 + Psest_3323 0.47 +0.4 3,489,347 + Psest_3323 0.58 -0.8 3,489,348 - Psest_3323 0.58 +0.5 3,489,348 - Psest_3323 0.58 +0.9 3,489,596 + Psest_3323 0.75 +0.7 3,489,596 + Psest_3323 0.75 -0.1 3,489,596 + Psest_3323 0.75 +0.4 3,489,596 + Psest_3323 0.75 -0.4 3,489,596 + Psest_3323 0.75 +1.2 3,489,596 + Psest_3323 0.75 -0.8 3,489,596 + Psest_3323 0.75 -0.8 3,489,597 - Psest_3323 0.75 -1.6 3,489,597 - Psest_3323 0.75 +0.1 3,489,597 - Psest_3323 0.75 -0.8 3,489,597 - Psest_3323 0.75 -1.1 3,489,597 - Psest_3323 0.75 +1.4 3,489,839 + +0.5 3,489,839 + +0.8 3,489,839 + -2.4 3,489,839 + +1.9 3,489,839 + -0.8 3,489,839 + +0.6 3,489,839 + -0.1 3,489,839 + +1.6 3,489,839 + +0.2 3,489,839 + +0.2 3,489,839 + -0.8 3,489,840 - -0.4 3,489,840 - +0.2 3,489,840 - -0.1 3,489,840 - -1.0 3,489,840 - +1.2 3,489,840 - -0.5 3,489,843 + +0.9 3,489,844 - +1.3 3,489,844 - +0.0 3,489,967 + +0.5 3,489,967 + +0.1 3,489,967 + +0.2 3,489,968 - +0.5 3,489,998 - -0.2 3,490,052 - -0.4 3,490,139 - Psest_3324 0.15 +1.2 3,490,139 - Psest_3324 0.15 +1.6 3,490,281 + Psest_3324 0.39 +1.0 3,490,282 - Psest_3324 0.39 -0.4 3,490,282 - Psest_3324 0.39 +0.9 3,490,282 - Psest_3324 0.39 +0.4 3,490,282 - Psest_3324 0.39 +2.4 3,490,440 + Psest_3324 0.66 +0.3 3,490,440 + Psest_3324 0.66 +0.8 3,490,440 + Psest_3324 0.66 -0.8 3,490,441 - Psest_3324 0.66 -1.1 3,490,441 - Psest_3324 0.66 +0.4 3,490,441 - Psest_3324 0.66 -0.8 3,490,441 - Psest_3324 0.66 +1.1 3,490,441 - Psest_3324 0.66 +1.4 3,490,441 - Psest_3324 0.66 +1.2 3,490,441 - Psest_3324 0.66 +0.3 3,490,441 - Psest_3324 0.66 +1.5 3,490,510 + Psest_3324 0.78 +1.2 3,490,510 + Psest_3324 0.78 +1.0 3,490,510 + Psest_3324 0.78 +0.3 3,490,510 + Psest_3324 0.78 +0.9 3,490,510 + Psest_3324 0.78 +0.3 3,490,510 + Psest_3324 0.78 +0.2 3,490,510 + Psest_3324 0.78 +0.4 3,490,511 - Psest_3324 0.78 +0.1 3,490,511 - Psest_3324 0.78 -0.5 3,490,581 + Psest_3324 0.90 +0.0 3,490,581 + Psest_3324 0.90 +0.5 3,490,581 + Psest_3324 0.90 +0.8 3,490,581 + Psest_3324 0.90 -0.2 3,490,582 - +1.2 3,490,582 - -0.5 3,490,582 - -0.5 3,490,582 - -0.5 3,490,582 - +0.7 3,490,582 - +1.2 3,490,582 - -0.1 3,490,582 - +0.0 3,490,582 - -0.3 3,490,582 - +1.0 3,490,582 - +0.3 3,490,627 + +0.5 3,490,627 + +1.9 3,490,627 + +0.4 3,490,627 + +1.0 3,490,627 + -1.6 3,490,627 + +1.2 3,490,628 - -1.6 3,490,628 - -0.3 3,490,628 - +0.1 3,490,628 - -0.1 3,490,628 - +0.2 3,490,658 - -1.6 3,490,658 - -0.2 3,490,662 - -1.0 3,490,662 - -0.2 3,490,662 - +0.6 3,490,662 - +0.8 3,490,662 - +0.5 3,490,662 - -0.2 3,490,715 + +0.3 3,490,715 + +0.4 3,490,783 + +0.5
Or see this region's nucleotide sequence