Experiment: m.b. Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3151 and HP15_3152 overlap by 18 nucleotides HP15_3152 and HP15_3153 are separated by 94 nucleotides HP15_3153 and HP15_3154 are separated by 130 nucleotides HP15_3154 and HP15_3155 are separated by 18 nucleotides
HP15_3151: HP15_3151 - transcriptional regulator, TetR family, at 3,304,920 to 3,305,531
_3151
HP15_3152: HP15_3152 - regulatory protein ada, at 3,305,514 to 3,306,404
_3152
HP15_3153: HP15_3153 - protein containing cyclic nucleotide-binding domain, at 3,306,499 to 3,307,197
_3153
HP15_3154: HP15_3154 - class II aldolase/adducin family protein, at 3,307,328 to 3,308,098
_3154
HP15_3155: HP15_3155 - metal dependent phosphohydrolase, at 3,308,117 to 3,308,713
_3155
Position (kb)
3306
3307
3308 Strain fitness (log2 ratio)
-2
-1
0
1 at 3305.511 kb on - strand at 3305.599 kb on + strand at 3305.601 kb on + strand at 3305.674 kb on + strand, within HP15_3152 at 3305.674 kb on + strand, within HP15_3152 at 3305.674 kb on + strand, within HP15_3152 at 3305.674 kb on + strand, within HP15_3152 at 3305.674 kb on + strand, within HP15_3152 at 3305.679 kb on + strand, within HP15_3152 at 3305.682 kb on - strand, within HP15_3152 at 3305.682 kb on - strand, within HP15_3152 at 3305.682 kb on - strand, within HP15_3152 at 3305.687 kb on - strand, within HP15_3152 at 3305.705 kb on + strand, within HP15_3152 at 3305.707 kb on + strand, within HP15_3152 at 3305.815 kb on + strand, within HP15_3152 at 3305.858 kb on + strand, within HP15_3152 at 3305.866 kb on + strand, within HP15_3152 at 3306.027 kb on + strand, within HP15_3152 at 3306.045 kb on - strand, within HP15_3152 at 3306.118 kb on - strand, within HP15_3152 at 3306.153 kb on + strand, within HP15_3152 at 3306.154 kb on + strand, within HP15_3152 at 3306.167 kb on + strand, within HP15_3152 at 3306.182 kb on + strand, within HP15_3152 at 3306.228 kb on + strand, within HP15_3152 at 3306.597 kb on + strand, within HP15_3153 at 3306.607 kb on + strand, within HP15_3153 at 3306.607 kb on + strand, within HP15_3153 at 3306.704 kb on - strand, within HP15_3153 at 3306.808 kb on + strand, within HP15_3153 at 3306.808 kb on + strand, within HP15_3153 at 3306.826 kb on + strand, within HP15_3153 at 3306.885 kb on + strand, within HP15_3153 at 3306.922 kb on - strand, within HP15_3153 at 3306.973 kb on + strand, within HP15_3153 at 3307.002 kb on + strand, within HP15_3153 at 3307.044 kb on + strand, within HP15_3153 at 3307.052 kb on - strand, within HP15_3153 at 3307.061 kb on - strand, within HP15_3153 at 3307.201 kb on - strand at 3307.276 kb on + strand at 3307.311 kb on + strand at 3307.311 kb on + strand at 3307.311 kb on + strand at 3307.311 kb on + strand at 3307.319 kb on - strand at 3307.319 kb on - strand at 3307.319 kb on - strand at 3307.319 kb on - strand at 3307.319 kb on - strand at 3307.319 kb on - strand at 3307.319 kb on - strand at 3307.319 kb on - strand at 3307.319 kb on - strand at 3307.324 kb on - strand at 3307.330 kb on + strand at 3307.376 kb on + strand at 3307.419 kb on + strand, within HP15_3154 at 3307.479 kb on - strand, within HP15_3154 at 3307.535 kb on + strand, within HP15_3154 at 3307.559 kb on - strand, within HP15_3154 at 3307.581 kb on - strand, within HP15_3154 at 3307.661 kb on + strand, within HP15_3154 at 3307.692 kb on + strand, within HP15_3154 at 3307.717 kb on + strand, within HP15_3154 at 3307.724 kb on + strand, within HP15_3154 at 3307.725 kb on - strand, within HP15_3154 at 3307.928 kb on + strand, within HP15_3154 at 3307.936 kb on - strand, within HP15_3154 at 3308.023 kb on + strand at 3308.023 kb on + strand at 3308.032 kb on - strand at 3308.171 kb on + strand at 3308.171 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.016 mg/ml remove 3,305,511 - -0.2 3,305,599 + -1.3 3,305,601 + +0.8 3,305,674 + HP15_3152 0.18 -0.0 3,305,674 + HP15_3152 0.18 +1.0 3,305,674 + HP15_3152 0.18 -0.2 3,305,674 + HP15_3152 0.18 +0.7 3,305,674 + HP15_3152 0.18 -0.0 3,305,679 + HP15_3152 0.19 +1.1 3,305,682 - HP15_3152 0.19 -0.4 3,305,682 - HP15_3152 0.19 -0.5 3,305,682 - HP15_3152 0.19 -1.7 3,305,687 - HP15_3152 0.19 -0.2 3,305,705 + HP15_3152 0.21 -0.6 3,305,707 + HP15_3152 0.22 -0.6 3,305,815 + HP15_3152 0.34 -0.2 3,305,858 + HP15_3152 0.39 -0.2 3,305,866 + HP15_3152 0.40 -0.3 3,306,027 + HP15_3152 0.58 +0.1 3,306,045 - HP15_3152 0.60 +0.0 3,306,118 - HP15_3152 0.68 -0.0 3,306,153 + HP15_3152 0.72 +0.5 3,306,154 + HP15_3152 0.72 -0.7 3,306,167 + HP15_3152 0.73 -0.1 3,306,182 + HP15_3152 0.75 -0.9 3,306,228 + HP15_3152 0.80 -0.8 3,306,597 + HP15_3153 0.14 -0.5 3,306,607 + HP15_3153 0.15 -1.0 3,306,607 + HP15_3153 0.15 -0.5 3,306,704 - HP15_3153 0.29 -0.6 3,306,808 + HP15_3153 0.44 +0.6 3,306,808 + HP15_3153 0.44 -1.4 3,306,826 + HP15_3153 0.47 -0.8 3,306,885 + HP15_3153 0.55 +0.6 3,306,922 - HP15_3153 0.61 -0.6 3,306,973 + HP15_3153 0.68 -1.6 3,307,002 + HP15_3153 0.72 +0.5 3,307,044 + HP15_3153 0.78 -1.0 3,307,052 - HP15_3153 0.79 -0.3 3,307,061 - HP15_3153 0.80 -0.5 3,307,201 - -0.2 3,307,276 + -0.6 3,307,311 + +1.0 3,307,311 + +1.0 3,307,311 + -0.5 3,307,311 + -0.5 3,307,319 - -0.9 3,307,319 - +0.8 3,307,319 - +0.1 3,307,319 - -0.1 3,307,319 - -0.3 3,307,319 - +0.5 3,307,319 - -0.2 3,307,319 - +0.1 3,307,319 - +0.0 3,307,324 - +0.6 3,307,330 + +0.6 3,307,376 + -0.7 3,307,419 + HP15_3154 0.12 -0.5 3,307,479 - HP15_3154 0.20 -0.1 3,307,535 + HP15_3154 0.27 +0.6 3,307,559 - HP15_3154 0.30 +0.6 3,307,581 - HP15_3154 0.33 -0.2 3,307,661 + HP15_3154 0.43 -0.7 3,307,692 + HP15_3154 0.47 +0.6 3,307,717 + HP15_3154 0.50 +1.3 3,307,724 + HP15_3154 0.51 +1.0 3,307,725 - HP15_3154 0.51 -0.4 3,307,928 + HP15_3154 0.78 +0.7 3,307,936 - HP15_3154 0.79 -0.5 3,308,023 + -1.9 3,308,023 + +0.7 3,308,032 - -0.3 3,308,171 + +0.3 3,308,171 + -0.1
Or see this region's nucleotide sequence