Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3090 and Psest_3091 are separated by 48 nucleotides Psest_3091 and Psest_3092 overlap by 8 nucleotides Psest_3092 and Psest_3093 overlap by 4 nucleotides Psest_3093 and Psest_3094 are separated by 91 nucleotides
Psest_3090: Psest_3090 - DNA repair protein RecO, at 3,269,331 to 3,270,020
_3090
Psest_3091: Psest_3091 - GTP-binding protein Era, at 3,270,069 to 3,270,980
_3091
Psest_3092: Psest_3092 - ribonuclease III, bacterial, at 3,270,973 to 3,271,662
_3092
Psest_3093: Psest_3093 - hypothetical protein, at 3,271,659 to 3,272,036
_3093
Psest_3094: Psest_3094 - signal peptidase I, bacterial type, at 3,272,128 to 3,272,982
_3094
Position (kb)
3270
3271
3272 Strain fitness (log2 ratio)
-1
0
1 at 3269.983 kb on + strand at 3269.984 kb on - strand at 3271.296 kb on - strand, within Psest_3092 at 3271.296 kb on - strand, within Psest_3092 at 3271.576 kb on - strand, within Psest_3092 at 3271.576 kb on - strand, within Psest_3092 at 3271.576 kb on - strand, within Psest_3092 at 3271.576 kb on - strand, within Psest_3092 at 3271.672 kb on - strand at 3271.837 kb on - strand, within Psest_3093 at 3271.837 kb on - strand, within Psest_3093 at 3271.837 kb on - strand, within Psest_3093 at 3271.837 kb on - strand, within Psest_3093 at 3271.837 kb on - strand, within Psest_3093 at 3271.837 kb on - strand, within Psest_3093 at 3271.837 kb on - strand, within Psest_3093 at 3271.837 kb on - strand, within Psest_3093 at 3271.837 kb on - strand, within Psest_3093 at 3271.837 kb on - strand, within Psest_3093 at 3271.837 kb on - strand, within Psest_3093 at 3271.837 kb on - strand, within Psest_3093 at 3271.837 kb on - strand, within Psest_3093 at 3271.837 kb on - strand, within Psest_3093 at 3271.847 kb on - strand, within Psest_3093 at 3271.922 kb on - strand, within Psest_3093 at 3271.922 kb on - strand, within Psest_3093 at 3271.931 kb on - strand, within Psest_3093 at 3272.047 kb on - strand at 3272.047 kb on - strand at 3272.047 kb on - strand at 3272.085 kb on - strand at 3272.085 kb on - strand at 3272.085 kb on - strand at 3272.085 kb on - strand at 3272.085 kb on - strand at 3272.085 kb on - strand at 3272.085 kb on - strand at 3272.085 kb on - strand at 3272.085 kb on - strand at 3272.087 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 3,269,983 + +0.0 3,269,984 - +0.1 3,271,296 - Psest_3092 0.47 +0.7 3,271,296 - Psest_3092 0.47 +1.7 3,271,576 - Psest_3092 0.87 -0.2 3,271,576 - Psest_3092 0.87 +1.7 3,271,576 - Psest_3092 0.87 +0.4 3,271,576 - Psest_3092 0.87 +0.9 3,271,672 - -0.1 3,271,837 - Psest_3093 0.47 +0.3 3,271,837 - Psest_3093 0.47 +0.9 3,271,837 - Psest_3093 0.47 +0.5 3,271,837 - Psest_3093 0.47 -0.4 3,271,837 - Psest_3093 0.47 -0.1 3,271,837 - Psest_3093 0.47 +0.7 3,271,837 - Psest_3093 0.47 -0.8 3,271,837 - Psest_3093 0.47 +1.1 3,271,837 - Psest_3093 0.47 -0.1 3,271,837 - Psest_3093 0.47 -0.0 3,271,837 - Psest_3093 0.47 +1.4 3,271,837 - Psest_3093 0.47 +0.1 3,271,837 - Psest_3093 0.47 +0.1 3,271,837 - Psest_3093 0.47 -0.5 3,271,847 - Psest_3093 0.50 -0.4 3,271,922 - Psest_3093 0.70 -0.2 3,271,922 - Psest_3093 0.70 -0.4 3,271,931 - Psest_3093 0.72 +0.1 3,272,047 - +0.9 3,272,047 - +0.6 3,272,047 - -0.4 3,272,085 - +0.4 3,272,085 - +1.6 3,272,085 - -0.3 3,272,085 - +0.8 3,272,085 - +0.4 3,272,085 - +0.9 3,272,085 - -0.3 3,272,085 - -0.4 3,272,085 - +0.1 3,272,087 - +1.4
Or see this region's nucleotide sequence