Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3013 and Psest_3014 are separated by 124 nucleotides Psest_3014 and Psest_3015 overlap by 4 nucleotides Psest_3015 and Psest_3016 are separated by 46 nucleotides
Psest_3013: Psest_3013 - cobyrinic acid a,c-diamide synthase, at 3,200,903 to 3,202,195
_3013
Psest_3014: Psest_3014 - cob(I)alamin adenosyltransferase, at 3,202,320 to 3,202,931
_3014
Psest_3015: Psest_3015 - hypothetical protein, at 3,202,928 to 3,203,497
_3015
Psest_3016: Psest_3016 - TonB-dependent vitamin B12 receptor, at 3,203,544 to 3,205,397
_3016
Position (kb) 3202
3203 Strain fitness (log2 ratio) -1
0
1
2 at 3201.345 kb on + strand, within Psest_3013 at 3201.346 kb on - strand, within Psest_3013 at 3201.442 kb on - strand, within Psest_3013 at 3202.012 kb on - strand, within Psest_3013 at 3202.186 kb on + strand at 3202.218 kb on - strand at 3202.285 kb on + strand at 3202.285 kb on + strand at 3202.286 kb on - strand at 3202.286 kb on - strand at 3202.347 kb on - strand at 3202.507 kb on + strand, within Psest_3014 at 3202.507 kb on + strand, within Psest_3014 at 3202.507 kb on + strand, within Psest_3014 at 3202.660 kb on + strand, within Psest_3014 at 3203.001 kb on + strand, within Psest_3015 at 3203.002 kb on - strand, within Psest_3015 at 3203.034 kb on + strand, within Psest_3015 at 3203.034 kb on + strand, within Psest_3015 at 3203.034 kb on + strand, within Psest_3015 at 3203.035 kb on - strand, within Psest_3015 at 3203.035 kb on - strand, within Psest_3015 at 3203.035 kb on - strand, within Psest_3015 at 3203.035 kb on - strand, within Psest_3015 at 3203.038 kb on + strand, within Psest_3015 at 3203.038 kb on + strand, within Psest_3015 at 3203.039 kb on - strand, within Psest_3015 at 3203.095 kb on - strand, within Psest_3015 at 3203.121 kb on + strand, within Psest_3015 at 3203.171 kb on - strand, within Psest_3015 at 3203.199 kb on + strand, within Psest_3015 at 3203.199 kb on + strand, within Psest_3015 at 3203.199 kb on + strand, within Psest_3015 at 3203.199 kb on + strand, within Psest_3015 at 3203.199 kb on + strand, within Psest_3015 at 3203.229 kb on + strand, within Psest_3015 at 3203.475 kb on + strand at 3203.545 kb on + strand at 3203.545 kb on + strand at 3203.545 kb on + strand at 3203.546 kb on - strand at 3203.557 kb on + strand at 3203.572 kb on + strand at 3203.572 kb on + strand at 3203.596 kb on + strand at 3203.614 kb on + strand at 3203.887 kb on + strand, within Psest_3016 at 3203.887 kb on + strand, within Psest_3016 at 3203.888 kb on - strand, within Psest_3016 at 3203.888 kb on - strand, within Psest_3016
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 3,201,345 + Psest_3013 0.34 +0.0 3,201,346 - Psest_3013 0.34 -0.3 3,201,442 - Psest_3013 0.42 +0.7 3,202,012 - Psest_3013 0.86 +0.1 3,202,186 + +0.1 3,202,218 - +2.1 3,202,285 + +0.1 3,202,285 + +0.5 3,202,286 - +1.7 3,202,286 - -0.5 3,202,347 - +2.1 3,202,507 + Psest_3014 0.31 +2.5 3,202,507 + Psest_3014 0.31 +0.9 3,202,507 + Psest_3014 0.31 -0.2 3,202,660 + Psest_3014 0.56 +0.2 3,203,001 + Psest_3015 0.13 +0.0 3,203,002 - Psest_3015 0.13 -0.5 3,203,034 + Psest_3015 0.19 -0.9 3,203,034 + Psest_3015 0.19 +1.1 3,203,034 + Psest_3015 0.19 +0.5 3,203,035 - Psest_3015 0.19 -0.0 3,203,035 - Psest_3015 0.19 -0.2 3,203,035 - Psest_3015 0.19 +0.7 3,203,035 - Psest_3015 0.19 +1.1 3,203,038 + Psest_3015 0.19 +1.5 3,203,038 + Psest_3015 0.19 +0.4 3,203,039 - Psest_3015 0.19 +0.6 3,203,095 - Psest_3015 0.29 +1.1 3,203,121 + Psest_3015 0.34 +0.3 3,203,171 - Psest_3015 0.43 -1.7 3,203,199 + Psest_3015 0.48 +0.0 3,203,199 + Psest_3015 0.48 -0.1 3,203,199 + Psest_3015 0.48 +0.7 3,203,199 + Psest_3015 0.48 -0.3 3,203,199 + Psest_3015 0.48 +0.3 3,203,229 + Psest_3015 0.53 +0.6 3,203,475 + +0.4 3,203,545 + +0.6 3,203,545 + +1.0 3,203,545 + -0.0 3,203,546 - +0.1 3,203,557 + -0.3 3,203,572 + +0.8 3,203,572 + +1.7 3,203,596 + +0.7 3,203,614 + +0.9 3,203,887 + Psest_3016 0.19 +0.5 3,203,887 + Psest_3016 0.19 +1.1 3,203,888 - Psest_3016 0.19 +0.5 3,203,888 - Psest_3016 0.19 -0.5
Or see this region's nucleotide sequence