Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2893 and Psest_2894 are separated by 246 nucleotides Psest_2894 and Psest_2895 are separated by 49 nucleotides
Psest_2893: Psest_2893 - Arabinose efflux permease, at 3,089,230 to 3,090,708
_2893
Psest_2894: Psest_2894 - addiction module antidote protein, HigA family, at 3,090,955 to 3,091,335
_2894
Psest_2895: Psest_2895 - Uncharacterized conserved protein, at 3,091,385 to 3,092,956
_2895
Position (kb)
3090
3091
3092 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3090.074 kb on + strand, within Psest_2893 at 3090.074 kb on + strand, within Psest_2893 at 3090.075 kb on - strand, within Psest_2893 at 3090.075 kb on - strand, within Psest_2893 at 3090.075 kb on - strand, within Psest_2893 at 3090.167 kb on + strand, within Psest_2893 at 3090.167 kb on + strand, within Psest_2893 at 3090.223 kb on - strand, within Psest_2893 at 3090.259 kb on + strand, within Psest_2893 at 3090.259 kb on + strand, within Psest_2893 at 3090.259 kb on + strand, within Psest_2893 at 3090.260 kb on - strand, within Psest_2893 at 3090.260 kb on - strand, within Psest_2893 at 3090.260 kb on - strand, within Psest_2893 at 3090.419 kb on - strand, within Psest_2893 at 3090.419 kb on - strand, within Psest_2893 at 3090.476 kb on - strand, within Psest_2893 at 3090.476 kb on - strand, within Psest_2893 at 3090.874 kb on + strand at 3090.875 kb on - strand at 3090.875 kb on - strand at 3090.875 kb on - strand at 3090.875 kb on - strand at 3090.875 kb on - strand at 3090.875 kb on - strand at 3090.875 kb on - strand at 3090.914 kb on - strand at 3090.951 kb on - strand at 3091.049 kb on + strand, within Psest_2894 at 3091.050 kb on - strand, within Psest_2894 at 3091.050 kb on - strand, within Psest_2894 at 3091.244 kb on - strand, within Psest_2894 at 3091.297 kb on - strand, within Psest_2894 at 3091.329 kb on + strand at 3091.330 kb on - strand at 3091.330 kb on - strand at 3091.330 kb on - strand at 3091.330 kb on - strand at 3091.334 kb on - strand at 3091.392 kb on - strand at 3091.392 kb on - strand at 3091.433 kb on - strand at 3091.619 kb on + strand, within Psest_2895 at 3091.619 kb on + strand, within Psest_2895 at 3091.682 kb on - strand, within Psest_2895 at 3091.682 kb on - strand, within Psest_2895 at 3091.778 kb on - strand, within Psest_2895 at 3091.820 kb on - strand, within Psest_2895 at 3091.823 kb on + strand, within Psest_2895 at 3092.096 kb on - strand, within Psest_2895
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 3,090,074 + Psest_2893 0.57 -0.4 3,090,074 + Psest_2893 0.57 +0.4 3,090,075 - Psest_2893 0.57 +1.3 3,090,075 - Psest_2893 0.57 +0.4 3,090,075 - Psest_2893 0.57 -0.0 3,090,167 + Psest_2893 0.63 +0.8 3,090,167 + Psest_2893 0.63 -0.7 3,090,223 - Psest_2893 0.67 +0.5 3,090,259 + Psest_2893 0.70 -0.8 3,090,259 + Psest_2893 0.70 +1.3 3,090,259 + Psest_2893 0.70 -0.0 3,090,260 - Psest_2893 0.70 +0.9 3,090,260 - Psest_2893 0.70 -0.1 3,090,260 - Psest_2893 0.70 +0.8 3,090,419 - Psest_2893 0.80 +0.6 3,090,419 - Psest_2893 0.80 -0.6 3,090,476 - Psest_2893 0.84 +1.9 3,090,476 - Psest_2893 0.84 +0.8 3,090,874 + +0.7 3,090,875 - -1.3 3,090,875 - -2.1 3,090,875 - +1.3 3,090,875 - -0.0 3,090,875 - +0.0 3,090,875 - +0.2 3,090,875 - -0.1 3,090,914 - +0.0 3,090,951 - +0.7 3,091,049 + Psest_2894 0.25 +0.5 3,091,050 - Psest_2894 0.25 +0.2 3,091,050 - Psest_2894 0.25 +0.0 3,091,244 - Psest_2894 0.76 +1.2 3,091,297 - Psest_2894 0.90 +1.5 3,091,329 + +0.3 3,091,330 - -0.5 3,091,330 - +0.0 3,091,330 - -1.1 3,091,330 - -0.5 3,091,334 - +0.6 3,091,392 - -0.3 3,091,392 - +0.2 3,091,433 - +0.5 3,091,619 + Psest_2895 0.15 -2.0 3,091,619 + Psest_2895 0.15 -2.3 3,091,682 - Psest_2895 0.19 +1.2 3,091,682 - Psest_2895 0.19 +1.0 3,091,778 - Psest_2895 0.25 +0.3 3,091,820 - Psest_2895 0.28 +0.7 3,091,823 + Psest_2895 0.28 -0.0 3,092,096 - Psest_2895 0.45 +0.2
Or see this region's nucleotide sequence