Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2774 and Psest_2775 are separated by 398 nucleotides Psest_2775 and Psest_2776 are separated by 9 nucleotides Psest_2776 and Psest_2777 overlap by 4 nucleotides Psest_2777 and Psest_2778 are separated by 158 nucleotides
Psest_2774: Psest_2774 - Transcriptional regulators of sugar metabolism, at 2,971,095 to 2,971,853
_2774
Psest_2775: Psest_2775 - Glycerol-3-phosphate dehydrogenase, at 2,972,252 to 2,973,787
_2775
Psest_2776: Psest_2776 - Uncharacterized protein conserved in bacteria, at 2,973,797 to 2,974,084
_2776
Psest_2777: Psest_2777 - hypothetical protein, at 2,974,081 to 2,974,308
_2777
Psest_2778: Psest_2778 - Parvulin-like peptidyl-prolyl isomerase, at 2,974,467 to 2,974,748
_2778
Position (kb)
2972
2973
2974 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2971.279 kb on + strand, within Psest_2774 at 2971.280 kb on - strand, within Psest_2774 at 2971.962 kb on + strand at 2971.963 kb on - strand at 2971.963 kb on - strand at 2972.005 kb on - strand at 2972.005 kb on - strand at 2972.068 kb on - strand at 2972.090 kb on + strand at 2972.090 kb on + strand at 2972.090 kb on + strand at 2972.092 kb on + strand at 2972.092 kb on + strand at 2972.093 kb on - strand at 2972.093 kb on - strand at 2972.093 kb on - strand at 2972.093 kb on - strand at 2972.093 kb on - strand at 2972.137 kb on - strand at 2972.285 kb on + strand at 2972.299 kb on - strand at 2972.395 kb on + strand at 2972.395 kb on + strand at 2972.971 kb on + strand, within Psest_2775 at 2972.990 kb on + strand, within Psest_2775 at 2972.990 kb on + strand, within Psest_2775 at 2972.991 kb on - strand, within Psest_2775 at 2972.991 kb on - strand, within Psest_2775 at 2973.009 kb on - strand, within Psest_2775 at 2973.009 kb on - strand, within Psest_2775 at 2973.143 kb on + strand, within Psest_2775 at 2973.144 kb on - strand, within Psest_2775 at 2973.205 kb on + strand, within Psest_2775 at 2973.206 kb on - strand, within Psest_2775 at 2973.273 kb on - strand, within Psest_2775 at 2973.273 kb on - strand, within Psest_2775 at 2973.612 kb on - strand, within Psest_2775 at 2974.300 kb on - strand at 2974.447 kb on - strand at 2974.653 kb on - strand, within Psest_2778 at 2974.657 kb on + strand, within Psest_2778 at 2974.657 kb on + strand, within Psest_2778 at 2974.657 kb on + strand, within Psest_2778 at 2974.657 kb on + strand, within Psest_2778 at 2974.658 kb on - strand, within Psest_2778
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 2,971,279 + Psest_2774 0.24 -1.0 2,971,280 - Psest_2774 0.24 -1.6 2,971,962 + -0.2 2,971,963 - +0.2 2,971,963 - +0.8 2,972,005 - -0.2 2,972,005 - +1.0 2,972,068 - +1.3 2,972,090 + -0.7 2,972,090 + +0.2 2,972,090 + +0.2 2,972,092 + +0.5 2,972,092 + +0.5 2,972,093 - +0.7 2,972,093 - +1.9 2,972,093 - +1.0 2,972,093 - +0.1 2,972,093 - +0.6 2,972,137 - +0.5 2,972,285 + +3.7 2,972,299 - +0.7 2,972,395 + +0.8 2,972,395 + +2.3 2,972,971 + Psest_2775 0.47 +2.8 2,972,990 + Psest_2775 0.48 +1.7 2,972,990 + Psest_2775 0.48 +2.0 2,972,991 - Psest_2775 0.48 +0.4 2,972,991 - Psest_2775 0.48 +2.7 2,973,009 - Psest_2775 0.49 +0.6 2,973,009 - Psest_2775 0.49 +0.8 2,973,143 + Psest_2775 0.58 +2.1 2,973,144 - Psest_2775 0.58 +2.3 2,973,205 + Psest_2775 0.62 +2.3 2,973,206 - Psest_2775 0.62 +1.3 2,973,273 - Psest_2775 0.66 +2.0 2,973,273 - Psest_2775 0.66 +2.6 2,973,612 - Psest_2775 0.89 +2.1 2,974,300 - +0.4 2,974,447 - +1.0 2,974,653 - Psest_2778 0.66 -0.1 2,974,657 + Psest_2778 0.67 +0.1 2,974,657 + Psest_2778 0.67 -0.7 2,974,657 + Psest_2778 0.67 +2.6 2,974,657 + Psest_2778 0.67 -1.1 2,974,658 - Psest_2778 0.68 -0.6
Or see this region's nucleotide sequence