Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2747 and Psest_2748 are separated by 69 nucleotides Psest_2748 and Psest_2749 overlap by 4 nucleotides Psest_2749 and Psest_2750 are separated by 54 nucleotides
Psest_2747: Psest_2747 - Putative NADPH-quinone reductase (modulator of drug activity B), at 2,938,324 to 2,939,106
_2747
Psest_2748: Psest_2748 - Transcriptional regulator, at 2,939,176 to 2,940,081
_2748
Psest_2749: Psest_2749 - Predicted transcriptional regulators, at 2,940,078 to 2,940,461
_2749
Psest_2750: Psest_2750 - Nucleoside-diphosphate-sugar epimerases, at 2,940,516 to 2,941,607
_2750
Position (kb)
2939
2940
2941 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2938.336 kb on + strand at 2938.336 kb on + strand at 2938.336 kb on + strand at 2938.336 kb on + strand at 2938.336 kb on + strand at 2938.337 kb on - strand at 2938.337 kb on - strand at 2938.337 kb on - strand at 2938.337 kb on - strand at 2938.337 kb on - strand at 2938.579 kb on + strand, within Psest_2747 at 2938.579 kb on + strand, within Psest_2747 at 2938.579 kb on + strand, within Psest_2747 at 2938.579 kb on + strand, within Psest_2747 at 2938.580 kb on - strand, within Psest_2747 at 2938.580 kb on - strand, within Psest_2747 at 2938.580 kb on - strand, within Psest_2747 at 2938.580 kb on - strand, within Psest_2747 at 2938.580 kb on - strand, within Psest_2747 at 2938.629 kb on - strand, within Psest_2747 at 2938.740 kb on - strand, within Psest_2747 at 2938.740 kb on - strand, within Psest_2747 at 2938.758 kb on - strand, within Psest_2747 at 2938.758 kb on - strand, within Psest_2747 at 2938.758 kb on - strand, within Psest_2747 at 2938.758 kb on - strand, within Psest_2747 at 2938.988 kb on + strand, within Psest_2747 at 2938.988 kb on + strand, within Psest_2747 at 2938.988 kb on + strand, within Psest_2747 at 2938.988 kb on + strand, within Psest_2747 at 2938.989 kb on - strand, within Psest_2747 at 2938.989 kb on - strand, within Psest_2747 at 2939.087 kb on + strand at 2939.088 kb on - strand at 2939.088 kb on - strand at 2939.159 kb on + strand at 2939.172 kb on + strand at 2939.354 kb on + strand, within Psest_2748 at 2939.704 kb on + strand, within Psest_2748 at 2940.072 kb on + strand at 2940.072 kb on + strand at 2940.072 kb on + strand at 2940.079 kb on + strand at 2940.079 kb on + strand at 2940.080 kb on - strand at 2940.152 kb on - strand, within Psest_2749 at 2940.152 kb on - strand, within Psest_2749 at 2940.152 kb on - strand, within Psest_2749 at 2940.152 kb on - strand, within Psest_2749 at 2940.202 kb on + strand, within Psest_2749 at 2940.202 kb on + strand, within Psest_2749 at 2940.203 kb on - strand, within Psest_2749 at 2940.203 kb on - strand, within Psest_2749 at 2940.203 kb on - strand, within Psest_2749 at 2940.203 kb on - strand, within Psest_2749 at 2940.203 kb on - strand, within Psest_2749 at 2940.548 kb on + strand at 2940.548 kb on + strand at 2940.549 kb on - strand at 2940.549 kb on - strand at 2940.888 kb on + strand, within Psest_2750 at 2940.889 kb on - strand, within Psest_2750 at 2940.889 kb on - strand, within Psest_2750 at 2940.978 kb on + strand, within Psest_2750 at 2940.979 kb on - strand, within Psest_2750 at 2940.981 kb on + strand, within Psest_2750 at 2940.982 kb on - strand, within Psest_2750
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 2,938,336 + +0.3 2,938,336 + +0.8 2,938,336 + -0.5 2,938,336 + -0.6 2,938,336 + -0.7 2,938,337 - -0.8 2,938,337 - -1.6 2,938,337 - +0.4 2,938,337 - -0.5 2,938,337 - +0.1 2,938,579 + Psest_2747 0.33 -0.0 2,938,579 + Psest_2747 0.33 -0.0 2,938,579 + Psest_2747 0.33 +1.4 2,938,579 + Psest_2747 0.33 +0.1 2,938,580 - Psest_2747 0.33 +0.4 2,938,580 - Psest_2747 0.33 -0.3 2,938,580 - Psest_2747 0.33 -0.1 2,938,580 - Psest_2747 0.33 -0.9 2,938,580 - Psest_2747 0.33 -0.2 2,938,629 - Psest_2747 0.39 -0.3 2,938,740 - Psest_2747 0.53 -0.0 2,938,740 - Psest_2747 0.53 -0.8 2,938,758 - Psest_2747 0.55 +0.0 2,938,758 - Psest_2747 0.55 -0.1 2,938,758 - Psest_2747 0.55 -1.1 2,938,758 - Psest_2747 0.55 +0.4 2,938,988 + Psest_2747 0.85 +0.1 2,938,988 + Psest_2747 0.85 +0.8 2,938,988 + Psest_2747 0.85 -2.3 2,938,988 + Psest_2747 0.85 -0.4 2,938,989 - Psest_2747 0.85 -0.2 2,938,989 - Psest_2747 0.85 +0.6 2,939,087 + -0.5 2,939,088 - -1.8 2,939,088 - +0.5 2,939,159 + -0.8 2,939,172 + +0.1 2,939,354 + Psest_2748 0.20 +0.4 2,939,704 + Psest_2748 0.58 +1.1 2,940,072 + -1.1 2,940,072 + -0.2 2,940,072 + -0.2 2,940,079 + +0.8 2,940,079 + +2.3 2,940,080 - +1.0 2,940,152 - Psest_2749 0.19 +0.5 2,940,152 - Psest_2749 0.19 -0.6 2,940,152 - Psest_2749 0.19 +0.4 2,940,152 - Psest_2749 0.19 -0.3 2,940,202 + Psest_2749 0.32 +0.7 2,940,202 + Psest_2749 0.32 -0.8 2,940,203 - Psest_2749 0.33 +0.6 2,940,203 - Psest_2749 0.33 -1.1 2,940,203 - Psest_2749 0.33 +0.8 2,940,203 - Psest_2749 0.33 +0.1 2,940,203 - Psest_2749 0.33 +1.4 2,940,548 + +0.4 2,940,548 + +0.2 2,940,549 - +2.3 2,940,549 - +0.6 2,940,888 + Psest_2750 0.34 -2.0 2,940,889 - Psest_2750 0.34 +0.6 2,940,889 - Psest_2750 0.34 -0.2 2,940,978 + Psest_2750 0.42 -0.0 2,940,979 - Psest_2750 0.42 -0.3 2,940,981 + Psest_2750 0.43 +0.0 2,940,982 - Psest_2750 0.43 +0.4
Or see this region's nucleotide sequence