Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2643 and Psest_2644 are separated by 15 nucleotides Psest_2644 and Psest_2645 are separated by 38 nucleotides Psest_2645 and Psest_2646 are separated by 208 nucleotides
Psest_2643: Psest_2643 - Beta-glucosidase-related glycosidases, at 2,826,577 to 2,827,575
_2643
Psest_2644: Psest_2644 - Uncharacterized protein conserved in bacteria, at 2,827,591 to 2,828,115
_2644
Psest_2645: Psest_2645 - Transcriptional regulator, at 2,828,154 to 2,828,861
_2645
Psest_2646: Psest_2646 - SOS regulatory protein LexA, at 2,829,070 to 2,829,678
_2646
Position (kb)
2827
2828
2829 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2826.642 kb on - strand at 2826.750 kb on + strand, within Psest_2643 at 2826.750 kb on + strand, within Psest_2643 at 2826.751 kb on - strand, within Psest_2643 at 2826.751 kb on - strand, within Psest_2643 at 2826.751 kb on - strand, within Psest_2643 at 2826.751 kb on - strand, within Psest_2643 at 2827.575 kb on + strand at 2827.575 kb on + strand at 2827.575 kb on + strand at 2827.575 kb on + strand at 2827.575 kb on + strand at 2827.575 kb on + strand at 2827.575 kb on + strand at 2827.576 kb on - strand at 2827.576 kb on - strand at 2827.576 kb on - strand at 2827.576 kb on - strand at 2827.576 kb on - strand at 2827.576 kb on - strand at 2827.576 kb on - strand at 2827.576 kb on - strand at 2827.576 kb on - strand at 2827.576 kb on - strand at 2827.576 kb on - strand at 2827.576 kb on - strand at 2827.576 kb on - strand at 2827.576 kb on - strand at 2827.576 kb on - strand at 2827.576 kb on - strand at 2827.579 kb on + strand at 2827.579 kb on + strand at 2827.579 kb on + strand at 2827.579 kb on + strand at 2827.579 kb on + strand at 2827.580 kb on - strand at 2827.580 kb on - strand at 2827.580 kb on - strand at 2827.580 kb on - strand at 2827.580 kb on - strand at 2827.580 kb on - strand at 2828.454 kb on + strand, within Psest_2645 at 2828.455 kb on - strand, within Psest_2645 at 2828.455 kb on - strand, within Psest_2645 at 2828.455 kb on - strand, within Psest_2645 at 2828.455 kb on - strand, within Psest_2645 at 2828.464 kb on + strand, within Psest_2645 at 2828.464 kb on + strand, within Psest_2645 at 2828.465 kb on - strand, within Psest_2645 at 2828.465 kb on - strand, within Psest_2645 at 2828.465 kb on - strand, within Psest_2645 at 2828.480 kb on - strand, within Psest_2645 at 2828.623 kb on + strand, within Psest_2645 at 2828.624 kb on - strand, within Psest_2645 at 2828.732 kb on - strand, within Psest_2645 at 2828.732 kb on - strand, within Psest_2645 at 2828.897 kb on - strand at 2829.030 kb on + strand at 2829.031 kb on - strand at 2829.031 kb on - strand at 2829.031 kb on - strand at 2829.032 kb on + strand at 2829.032 kb on + strand at 2829.033 kb on - strand at 2829.033 kb on - strand at 2829.034 kb on + strand at 2829.035 kb on - strand at 2829.035 kb on - strand at 2829.035 kb on - strand at 2829.051 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 2,826,642 - -0.9 2,826,750 + Psest_2643 0.17 -1.4 2,826,750 + Psest_2643 0.17 +0.8 2,826,751 - Psest_2643 0.17 +0.6 2,826,751 - Psest_2643 0.17 -0.5 2,826,751 - Psest_2643 0.17 +0.4 2,826,751 - Psest_2643 0.17 -3.1 2,827,575 + -1.0 2,827,575 + +0.1 2,827,575 + -1.6 2,827,575 + -0.2 2,827,575 + +0.6 2,827,575 + -0.0 2,827,575 + -0.7 2,827,576 - -0.2 2,827,576 - -0.1 2,827,576 - -1.2 2,827,576 - +0.5 2,827,576 - +0.2 2,827,576 - -0.5 2,827,576 - -0.6 2,827,576 - +0.2 2,827,576 - +0.2 2,827,576 - -1.9 2,827,576 - +0.7 2,827,576 - -0.3 2,827,576 - -1.8 2,827,576 - -0.1 2,827,576 - +0.7 2,827,576 - -1.8 2,827,579 + -0.2 2,827,579 + +1.7 2,827,579 + +0.3 2,827,579 + -1.0 2,827,579 + +0.8 2,827,580 - +1.0 2,827,580 - +0.5 2,827,580 - +0.2 2,827,580 - -1.2 2,827,580 - +1.0 2,827,580 - +0.0 2,828,454 + Psest_2645 0.42 +0.0 2,828,455 - Psest_2645 0.43 -0.4 2,828,455 - Psest_2645 0.43 -1.1 2,828,455 - Psest_2645 0.43 -0.2 2,828,455 - Psest_2645 0.43 +0.6 2,828,464 + Psest_2645 0.44 -0.9 2,828,464 + Psest_2645 0.44 -0.8 2,828,465 - Psest_2645 0.44 -0.1 2,828,465 - Psest_2645 0.44 -1.3 2,828,465 - Psest_2645 0.44 -1.0 2,828,480 - Psest_2645 0.46 -3.1 2,828,623 + Psest_2645 0.66 -0.0 2,828,624 - Psest_2645 0.66 -0.3 2,828,732 - Psest_2645 0.82 -1.1 2,828,732 - Psest_2645 0.82 -0.4 2,828,897 - +0.1 2,829,030 + +0.4 2,829,031 - +1.1 2,829,031 - -0.2 2,829,031 - -0.3 2,829,032 + +0.1 2,829,032 + +1.5 2,829,033 - -1.9 2,829,033 - -1.3 2,829,034 + -0.5 2,829,035 - -0.3 2,829,035 - -0.2 2,829,035 - -1.5 2,829,051 + +0.7
Or see this region's nucleotide sequence