Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2625 and Psest_2626 are separated by 54 nucleotides Psest_2626 and Psest_2627 are separated by 12 nucleotides
Psest_2625: Psest_2625 - Flp pilus assembly protein, secretin CpaC, at 2,806,866 to 2,808,380
_2625
Psest_2626: Psest_2626 - Flp pilus assembly protein CpaB, at 2,808,435 to 2,809,244
_2626
Psest_2627: Psest_2627 - hypothetical protein, at 2,809,257 to 2,810,576
_2627
Position (kb)
2808
2809
2810 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2807.649 kb on + strand, within Psest_2625 at 2807.649 kb on + strand, within Psest_2625 at 2807.650 kb on - strand, within Psest_2625 at 2807.650 kb on - strand, within Psest_2625 at 2807.650 kb on - strand, within Psest_2625 at 2807.890 kb on + strand, within Psest_2625 at 2807.890 kb on + strand, within Psest_2625 at 2807.891 kb on - strand, within Psest_2625 at 2808.127 kb on + strand, within Psest_2625 at 2808.127 kb on + strand, within Psest_2625 at 2808.128 kb on - strand, within Psest_2625 at 2808.128 kb on - strand, within Psest_2625 at 2808.226 kb on + strand, within Psest_2625 at 2808.226 kb on + strand, within Psest_2625 at 2808.226 kb on + strand, within Psest_2625 at 2808.226 kb on + strand, within Psest_2625 at 2808.227 kb on - strand, within Psest_2625 at 2808.227 kb on - strand, within Psest_2625 at 2808.227 kb on - strand, within Psest_2625 at 2808.354 kb on + strand at 2808.354 kb on + strand at 2808.360 kb on + strand at 2808.360 kb on + strand at 2808.360 kb on + strand at 2808.361 kb on - strand at 2808.361 kb on - strand at 2808.361 kb on - strand at 2808.361 kb on - strand at 2808.361 kb on - strand at 2808.361 kb on - strand at 2808.699 kb on + strand, within Psest_2626 at 2808.699 kb on + strand, within Psest_2626 at 2808.700 kb on - strand, within Psest_2626 at 2808.702 kb on + strand, within Psest_2626 at 2809.226 kb on - strand at 2809.226 kb on - strand at 2809.232 kb on + strand at 2809.285 kb on + strand at 2809.285 kb on + strand at 2809.285 kb on + strand at 2809.286 kb on - strand at 2809.501 kb on + strand, within Psest_2627 at 2809.502 kb on - strand, within Psest_2627 at 2809.780 kb on + strand, within Psest_2627 at 2809.780 kb on + strand, within Psest_2627 at 2809.896 kb on + strand, within Psest_2627 at 2809.897 kb on - strand, within Psest_2627 at 2809.897 kb on - strand, within Psest_2627 at 2809.948 kb on + strand, within Psest_2627 at 2810.035 kb on + strand, within Psest_2627 at 2810.035 kb on + strand, within Psest_2627 at 2810.036 kb on - strand, within Psest_2627 at 2810.036 kb on - strand, within Psest_2627 at 2810.036 kb on - strand, within Psest_2627 at 2810.036 kb on - strand, within Psest_2627 at 2810.036 kb on - strand, within Psest_2627 at 2810.036 kb on - strand, within Psest_2627 at 2810.062 kb on + strand, within Psest_2627 at 2810.062 kb on + strand, within Psest_2627 at 2810.062 kb on + strand, within Psest_2627 at 2810.062 kb on + strand, within Psest_2627 at 2810.062 kb on + strand, within Psest_2627 at 2810.063 kb on - strand, within Psest_2627 at 2810.063 kb on - strand, within Psest_2627 at 2810.063 kb on - strand, within Psest_2627 at 2810.063 kb on - strand, within Psest_2627 at 2810.063 kb on - strand, within Psest_2627 at 2810.140 kb on + strand, within Psest_2627 at 2810.243 kb on - strand, within Psest_2627
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 2,807,649 + Psest_2625 0.52 +1.0 2,807,649 + Psest_2625 0.52 +0.1 2,807,650 - Psest_2625 0.52 -1.0 2,807,650 - Psest_2625 0.52 -1.3 2,807,650 - Psest_2625 0.52 +0.1 2,807,890 + Psest_2625 0.68 +0.2 2,807,890 + Psest_2625 0.68 +0.4 2,807,891 - Psest_2625 0.68 -2.8 2,808,127 + Psest_2625 0.83 -0.7 2,808,127 + Psest_2625 0.83 +0.5 2,808,128 - Psest_2625 0.83 +1.0 2,808,128 - Psest_2625 0.83 -0.6 2,808,226 + Psest_2625 0.90 +0.1 2,808,226 + Psest_2625 0.90 -0.1 2,808,226 + Psest_2625 0.90 +0.3 2,808,226 + Psest_2625 0.90 -0.2 2,808,227 - Psest_2625 0.90 -0.3 2,808,227 - Psest_2625 0.90 +0.4 2,808,227 - Psest_2625 0.90 +0.3 2,808,354 + +0.5 2,808,354 + +0.8 2,808,360 + +0.5 2,808,360 + +1.6 2,808,360 + -0.0 2,808,361 - +0.4 2,808,361 - +0.5 2,808,361 - -0.1 2,808,361 - +0.8 2,808,361 - -0.7 2,808,361 - +0.2 2,808,699 + Psest_2626 0.33 +1.1 2,808,699 + Psest_2626 0.33 +0.6 2,808,700 - Psest_2626 0.33 -0.4 2,808,702 + Psest_2626 0.33 +1.2 2,809,226 - +1.0 2,809,226 - +0.4 2,809,232 + -0.1 2,809,285 + +1.0 2,809,285 + -0.7 2,809,285 + +0.8 2,809,286 - +1.0 2,809,501 + Psest_2627 0.18 -1.0 2,809,502 - Psest_2627 0.19 -0.1 2,809,780 + Psest_2627 0.40 +0.7 2,809,780 + Psest_2627 0.40 +0.1 2,809,896 + Psest_2627 0.48 +1.1 2,809,897 - Psest_2627 0.48 +0.3 2,809,897 - Psest_2627 0.48 +2.6 2,809,948 + Psest_2627 0.52 +0.9 2,810,035 + Psest_2627 0.59 +0.3 2,810,035 + Psest_2627 0.59 -0.3 2,810,036 - Psest_2627 0.59 +0.2 2,810,036 - Psest_2627 0.59 -0.0 2,810,036 - Psest_2627 0.59 +0.8 2,810,036 - Psest_2627 0.59 -1.5 2,810,036 - Psest_2627 0.59 +2.2 2,810,036 - Psest_2627 0.59 +0.0 2,810,062 + Psest_2627 0.61 -0.7 2,810,062 + Psest_2627 0.61 +0.6 2,810,062 + Psest_2627 0.61 -1.3 2,810,062 + Psest_2627 0.61 -0.2 2,810,062 + Psest_2627 0.61 -1.4 2,810,063 - Psest_2627 0.61 +0.2 2,810,063 - Psest_2627 0.61 +0.3 2,810,063 - Psest_2627 0.61 +0.5 2,810,063 - Psest_2627 0.61 -1.7 2,810,063 - Psest_2627 0.61 +1.0 2,810,140 + Psest_2627 0.67 -1.3 2,810,243 - Psest_2627 0.75 +0.0
Or see this region's nucleotide sequence