Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2623 and Psest_2624 are separated by 10 nucleotides Psest_2624 and Psest_2625 are separated by 15 nucleotides
Psest_2623: Psest_2623 - Flp pilus assembly protein TadG, at 2,805,236 to 2,806,570
_2623
Psest_2624: Psest_2624 - hypothetical protein, at 2,806,581 to 2,806,850
_2624
Psest_2625: Psest_2625 - Flp pilus assembly protein, secretin CpaC, at 2,806,866 to 2,808,380
_2625
Position (kb)
2806
2807 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2805.597 kb on + strand, within Psest_2623 at 2805.598 kb on - strand, within Psest_2623 at 2805.598 kb on - strand, within Psest_2623 at 2805.598 kb on - strand, within Psest_2623 at 2805.598 kb on - strand, within Psest_2623 at 2805.599 kb on + strand, within Psest_2623 at 2805.747 kb on + strand, within Psest_2623 at 2805.747 kb on + strand, within Psest_2623 at 2805.748 kb on - strand, within Psest_2623 at 2805.748 kb on - strand, within Psest_2623 at 2806.008 kb on + strand, within Psest_2623 at 2806.008 kb on + strand, within Psest_2623 at 2806.009 kb on - strand, within Psest_2623 at 2806.009 kb on - strand, within Psest_2623 at 2806.016 kb on - strand, within Psest_2623 at 2806.121 kb on - strand, within Psest_2623 at 2806.155 kb on + strand, within Psest_2623 at 2806.155 kb on + strand, within Psest_2623 at 2806.155 kb on + strand, within Psest_2623 at 2806.155 kb on + strand, within Psest_2623 at 2806.155 kb on + strand, within Psest_2623 at 2806.156 kb on - strand, within Psest_2623 at 2806.156 kb on - strand, within Psest_2623 at 2806.160 kb on - strand, within Psest_2623 at 2806.160 kb on - strand, within Psest_2623 at 2806.175 kb on + strand, within Psest_2623 at 2806.175 kb on + strand, within Psest_2623 at 2806.175 kb on + strand, within Psest_2623 at 2806.175 kb on + strand, within Psest_2623 at 2806.175 kb on + strand, within Psest_2623 at 2806.175 kb on + strand, within Psest_2623 at 2806.175 kb on + strand, within Psest_2623 at 2806.175 kb on + strand, within Psest_2623 at 2806.176 kb on - strand, within Psest_2623 at 2806.176 kb on - strand, within Psest_2623 at 2806.176 kb on - strand, within Psest_2623 at 2806.176 kb on - strand, within Psest_2623 at 2806.176 kb on - strand, within Psest_2623 at 2806.176 kb on - strand, within Psest_2623 at 2806.176 kb on - strand, within Psest_2623 at 2806.176 kb on - strand, within Psest_2623 at 2806.179 kb on + strand, within Psest_2623 at 2806.179 kb on + strand, within Psest_2623 at 2806.180 kb on - strand, within Psest_2623 at 2806.180 kb on - strand, within Psest_2623 at 2806.180 kb on - strand, within Psest_2623 at 2806.370 kb on + strand, within Psest_2623 at 2806.447 kb on + strand at 2806.447 kb on + strand at 2806.447 kb on + strand at 2806.448 kb on - strand at 2806.511 kb on + strand at 2806.511 kb on + strand at 2806.511 kb on + strand at 2806.512 kb on - strand at 2806.512 kb on - strand at 2806.512 kb on - strand at 2806.512 kb on - strand at 2806.512 kb on - strand at 2806.744 kb on + strand, within Psest_2624 at 2806.744 kb on + strand, within Psest_2624 at 2806.756 kb on + strand, within Psest_2624 at 2806.796 kb on - strand, within Psest_2624 at 2806.796 kb on - strand, within Psest_2624 at 2806.867 kb on + strand at 2806.867 kb on + strand at 2806.867 kb on + strand at 2806.868 kb on - strand at 2806.960 kb on + strand at 2806.960 kb on + strand at 2806.960 kb on + strand at 2806.961 kb on - strand at 2806.961 kb on - strand at 2806.961 kb on - strand at 2806.961 kb on - strand at 2807.080 kb on + strand, within Psest_2625 at 2807.080 kb on + strand, within Psest_2625 at 2807.080 kb on + strand, within Psest_2625 at 2807.080 kb on + strand, within Psest_2625 at 2807.080 kb on + strand, within Psest_2625 at 2807.080 kb on + strand, within Psest_2625 at 2807.080 kb on + strand, within Psest_2625 at 2807.080 kb on + strand, within Psest_2625 at 2807.080 kb on + strand, within Psest_2625 at 2807.080 kb on + strand, within Psest_2625 at 2807.080 kb on + strand, within Psest_2625 at 2807.081 kb on - strand, within Psest_2625 at 2807.081 kb on - strand, within Psest_2625 at 2807.081 kb on - strand, within Psest_2625 at 2807.081 kb on - strand, within Psest_2625 at 2807.147 kb on - strand, within Psest_2625 at 2807.147 kb on - strand, within Psest_2625 at 2807.147 kb on - strand, within Psest_2625 at 2807.147 kb on - strand, within Psest_2625 at 2807.402 kb on - strand, within Psest_2625 at 2807.402 kb on - strand, within Psest_2625 at 2807.649 kb on + strand, within Psest_2625 at 2807.649 kb on + strand, within Psest_2625 at 2807.650 kb on - strand, within Psest_2625 at 2807.650 kb on - strand, within Psest_2625 at 2807.650 kb on - strand, within Psest_2625
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 2,805,597 + Psest_2623 0.27 +0.3 2,805,598 - Psest_2623 0.27 +1.4 2,805,598 - Psest_2623 0.27 -0.4 2,805,598 - Psest_2623 0.27 -0.2 2,805,598 - Psest_2623 0.27 -1.7 2,805,599 + Psest_2623 0.27 +1.4 2,805,747 + Psest_2623 0.38 +0.4 2,805,747 + Psest_2623 0.38 -0.5 2,805,748 - Psest_2623 0.38 +0.4 2,805,748 - Psest_2623 0.38 -0.6 2,806,008 + Psest_2623 0.58 -0.8 2,806,008 + Psest_2623 0.58 +0.7 2,806,009 - Psest_2623 0.58 +0.1 2,806,009 - Psest_2623 0.58 -1.1 2,806,016 - Psest_2623 0.58 +0.6 2,806,121 - Psest_2623 0.66 +1.0 2,806,155 + Psest_2623 0.69 +0.6 2,806,155 + Psest_2623 0.69 -0.3 2,806,155 + Psest_2623 0.69 +1.0 2,806,155 + Psest_2623 0.69 -0.4 2,806,155 + Psest_2623 0.69 +0.6 2,806,156 - Psest_2623 0.69 -0.6 2,806,156 - Psest_2623 0.69 +0.3 2,806,160 - Psest_2623 0.69 +0.5 2,806,160 - Psest_2623 0.69 -0.0 2,806,175 + Psest_2623 0.70 +0.5 2,806,175 + Psest_2623 0.70 +0.3 2,806,175 + Psest_2623 0.70 +0.4 2,806,175 + Psest_2623 0.70 -0.3 2,806,175 + Psest_2623 0.70 -0.2 2,806,175 + Psest_2623 0.70 +0.1 2,806,175 + Psest_2623 0.70 +2.3 2,806,175 + Psest_2623 0.70 +0.1 2,806,176 - Psest_2623 0.70 -1.8 2,806,176 - Psest_2623 0.70 -0.0 2,806,176 - Psest_2623 0.70 -0.5 2,806,176 - Psest_2623 0.70 -0.7 2,806,176 - Psest_2623 0.70 +0.1 2,806,176 - Psest_2623 0.70 +0.6 2,806,176 - Psest_2623 0.70 -0.3 2,806,176 - Psest_2623 0.70 -1.8 2,806,179 + Psest_2623 0.71 +0.2 2,806,179 + Psest_2623 0.71 -0.2 2,806,180 - Psest_2623 0.71 +0.7 2,806,180 - Psest_2623 0.71 +0.3 2,806,180 - Psest_2623 0.71 -1.1 2,806,370 + Psest_2623 0.85 +0.1 2,806,447 + -0.0 2,806,447 + +1.3 2,806,447 + +0.1 2,806,448 - -0.5 2,806,511 + -1.0 2,806,511 + +0.6 2,806,511 + +0.4 2,806,512 - +0.7 2,806,512 - -0.4 2,806,512 - -0.1 2,806,512 - -0.1 2,806,512 - +0.3 2,806,744 + Psest_2624 0.60 +1.2 2,806,744 + Psest_2624 0.60 +0.0 2,806,756 + Psest_2624 0.65 -0.6 2,806,796 - Psest_2624 0.80 +2.2 2,806,796 - Psest_2624 0.80 +1.5 2,806,867 + -0.3 2,806,867 + -0.6 2,806,867 + +0.3 2,806,868 - +0.1 2,806,960 + +2.0 2,806,960 + -1.2 2,806,960 + +0.2 2,806,961 - +0.6 2,806,961 - -0.5 2,806,961 - -0.8 2,806,961 - +0.4 2,807,080 + Psest_2625 0.14 -1.5 2,807,080 + Psest_2625 0.14 +0.7 2,807,080 + Psest_2625 0.14 +0.4 2,807,080 + Psest_2625 0.14 +0.4 2,807,080 + Psest_2625 0.14 -1.3 2,807,080 + Psest_2625 0.14 +2.6 2,807,080 + Psest_2625 0.14 +1.0 2,807,080 + Psest_2625 0.14 -0.2 2,807,080 + Psest_2625 0.14 -1.7 2,807,080 + Psest_2625 0.14 -0.1 2,807,080 + Psest_2625 0.14 -0.0 2,807,081 - Psest_2625 0.14 -0.1 2,807,081 - Psest_2625 0.14 -0.2 2,807,081 - Psest_2625 0.14 +0.4 2,807,081 - Psest_2625 0.14 -0.3 2,807,147 - Psest_2625 0.19 -0.1 2,807,147 - Psest_2625 0.19 +0.6 2,807,147 - Psest_2625 0.19 +0.1 2,807,147 - Psest_2625 0.19 +1.0 2,807,402 - Psest_2625 0.35 -1.2 2,807,402 - Psest_2625 0.35 +1.2 2,807,649 + Psest_2625 0.52 +1.0 2,807,649 + Psest_2625 0.52 +0.1 2,807,650 - Psest_2625 0.52 -1.0 2,807,650 - Psest_2625 0.52 -1.3 2,807,650 - Psest_2625 0.52 +0.1
Or see this region's nucleotide sequence