Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2395 and Psest_2396 are separated by 2 nucleotides Psest_2396 and Psest_2397 overlap by 4 nucleotides
Psest_2395: Psest_2395 - Uncharacterized conserved protein, at 2,548,084 to 2,549,043
_2395
Psest_2396: Psest_2396 - Predicted transcriptional regulators, at 2,549,046 to 2,549,981
_2396
Psest_2397: Psest_2397 - Deoxyribodipyrimidine photolyase, at 2,549,978 to 2,551,408
_2397
Position (kb)
2549
2550 Strain fitness (log2 ratio)
-1
0
1
2 at 2548.214 kb on + strand, within Psest_2395 at 2548.390 kb on + strand, within Psest_2395 at 2548.390 kb on + strand, within Psest_2395 at 2548.458 kb on + strand, within Psest_2395 at 2548.585 kb on + strand, within Psest_2395 at 2548.586 kb on - strand, within Psest_2395 at 2548.586 kb on - strand, within Psest_2395 at 2548.660 kb on + strand, within Psest_2395 at 2548.666 kb on + strand, within Psest_2395 at 2548.667 kb on - strand, within Psest_2395 at 2548.667 kb on - strand, within Psest_2395 at 2548.667 kb on - strand, within Psest_2395 at 2548.762 kb on + strand, within Psest_2395 at 2548.978 kb on + strand at 2548.978 kb on + strand at 2548.978 kb on + strand at 2548.978 kb on + strand at 2548.978 kb on + strand at 2548.996 kb on + strand at 2548.997 kb on - strand at 2548.997 kb on - strand at 2549.206 kb on - strand, within Psest_2396 at 2549.562 kb on + strand, within Psest_2396 at 2549.562 kb on + strand, within Psest_2396 at 2549.562 kb on + strand, within Psest_2396 at 2549.562 kb on + strand, within Psest_2396 at 2549.562 kb on + strand, within Psest_2396 at 2549.562 kb on + strand, within Psest_2396 at 2549.563 kb on - strand, within Psest_2396 at 2549.563 kb on - strand, within Psest_2396 at 2549.563 kb on - strand, within Psest_2396 at 2549.760 kb on + strand, within Psest_2396 at 2549.761 kb on - strand, within Psest_2396 at 2549.861 kb on + strand, within Psest_2396 at 2549.861 kb on + strand, within Psest_2396 at 2550.071 kb on + strand at 2550.071 kb on + strand at 2550.071 kb on + strand at 2550.272 kb on + strand, within Psest_2397 at 2550.272 kb on + strand, within Psest_2397 at 2550.272 kb on + strand, within Psest_2397 at 2550.273 kb on - strand, within Psest_2397 at 2550.273 kb on - strand, within Psest_2397 at 2550.273 kb on - strand, within Psest_2397 at 2550.273 kb on - strand, within Psest_2397 at 2550.423 kb on + strand, within Psest_2397 at 2550.650 kb on + strand, within Psest_2397 at 2550.650 kb on + strand, within Psest_2397 at 2550.651 kb on - strand, within Psest_2397 at 2550.651 kb on - strand, within Psest_2397 at 2550.704 kb on + strand, within Psest_2397 at 2550.800 kb on - strand, within Psest_2397 at 2550.800 kb on - strand, within Psest_2397 at 2550.800 kb on - strand, within Psest_2397 at 2550.833 kb on + strand, within Psest_2397 at 2550.834 kb on - strand, within Psest_2397 at 2550.834 kb on - strand, within Psest_2397 at 2550.834 kb on - strand, within Psest_2397 at 2550.834 kb on - strand, within Psest_2397 at 2550.924 kb on - strand, within Psest_2397
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 2,548,214 + Psest_2395 0.14 +0.6 2,548,390 + Psest_2395 0.32 +0.6 2,548,390 + Psest_2395 0.32 +0.6 2,548,458 + Psest_2395 0.39 +1.0 2,548,585 + Psest_2395 0.52 +0.2 2,548,586 - Psest_2395 0.52 -0.7 2,548,586 - Psest_2395 0.52 -0.0 2,548,660 + Psest_2395 0.60 -0.7 2,548,666 + Psest_2395 0.61 -0.2 2,548,667 - Psest_2395 0.61 +0.9 2,548,667 - Psest_2395 0.61 +2.5 2,548,667 - Psest_2395 0.61 +0.3 2,548,762 + Psest_2395 0.71 +1.9 2,548,978 + +0.3 2,548,978 + +1.0 2,548,978 + +1.5 2,548,978 + -1.1 2,548,978 + +0.5 2,548,996 + +0.8 2,548,997 - +0.5 2,548,997 - +0.3 2,549,206 - Psest_2396 0.17 -0.3 2,549,562 + Psest_2396 0.55 +0.4 2,549,562 + Psest_2396 0.55 +1.2 2,549,562 + Psest_2396 0.55 +1.7 2,549,562 + Psest_2396 0.55 +0.7 2,549,562 + Psest_2396 0.55 +2.0 2,549,562 + Psest_2396 0.55 -0.2 2,549,563 - Psest_2396 0.55 +0.9 2,549,563 - Psest_2396 0.55 +0.4 2,549,563 - Psest_2396 0.55 +0.3 2,549,760 + Psest_2396 0.76 -0.3 2,549,761 - Psest_2396 0.76 +0.0 2,549,861 + Psest_2396 0.87 +0.3 2,549,861 + Psest_2396 0.87 +1.8 2,550,071 + -0.5 2,550,071 + +0.7 2,550,071 + +0.9 2,550,272 + Psest_2397 0.21 -0.5 2,550,272 + Psest_2397 0.21 -0.1 2,550,272 + Psest_2397 0.21 -0.4 2,550,273 - Psest_2397 0.21 +0.7 2,550,273 - Psest_2397 0.21 +0.9 2,550,273 - Psest_2397 0.21 +0.9 2,550,273 - Psest_2397 0.21 +0.3 2,550,423 + Psest_2397 0.31 -0.2 2,550,650 + Psest_2397 0.47 +1.1 2,550,650 + Psest_2397 0.47 +0.5 2,550,651 - Psest_2397 0.47 +1.1 2,550,651 - Psest_2397 0.47 -0.0 2,550,704 + Psest_2397 0.51 +0.4 2,550,800 - Psest_2397 0.57 -0.8 2,550,800 - Psest_2397 0.57 +0.3 2,550,800 - Psest_2397 0.57 +0.0 2,550,833 + Psest_2397 0.60 +0.5 2,550,834 - Psest_2397 0.60 +0.2 2,550,834 - Psest_2397 0.60 +1.4 2,550,834 - Psest_2397 0.60 +0.9 2,550,834 - Psest_2397 0.60 -0.3 2,550,924 - Psest_2397 0.66 -1.4
Or see this region's nucleotide sequence