Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2389 and Psest_2390 overlap by 4 nucleotides Psest_2390 and Psest_2391 are separated by 85 nucleotides Psest_2391 and Psest_2392 are separated by 173 nucleotides
Psest_2389: Psest_2389 - Na+/melibiose symporter and related transporters, at 2,540,586 to 2,541,824
_2389
Psest_2390: Psest_2390 - hypothetical protein, at 2,541,821 to 2,542,348
_2390
Psest_2391: Psest_2391 - PAS domain S-box, at 2,542,434 to 2,542,880
_2391
Psest_2392: Psest_2392 - PAS domain S-box/diguanylate cyclase (GGDEF) domain, at 2,543,054 to 2,545,714
_2392
Position (kb)
2541
2542
2543 Strain fitness (log2 ratio)
-1
0
1
2 at 2540.925 kb on + strand, within Psest_2389 at 2540.925 kb on + strand, within Psest_2389 at 2540.925 kb on + strand, within Psest_2389 at 2540.925 kb on + strand, within Psest_2389 at 2540.925 kb on + strand, within Psest_2389 at 2540.925 kb on + strand, within Psest_2389 at 2540.926 kb on - strand, within Psest_2389 at 2540.926 kb on - strand, within Psest_2389 at 2540.926 kb on - strand, within Psest_2389 at 2540.955 kb on + strand, within Psest_2389 at 2540.956 kb on - strand, within Psest_2389 at 2540.956 kb on - strand, within Psest_2389 at 2541.085 kb on - strand, within Psest_2389 at 2541.258 kb on + strand, within Psest_2389 at 2541.258 kb on + strand, within Psest_2389 at 2541.363 kb on + strand, within Psest_2389 at 2541.363 kb on + strand, within Psest_2389 at 2541.363 kb on + strand, within Psest_2389 at 2541.363 kb on + strand, within Psest_2389 at 2541.363 kb on + strand, within Psest_2389 at 2541.364 kb on - strand, within Psest_2389 at 2541.364 kb on - strand, within Psest_2389 at 2541.364 kb on - strand, within Psest_2389 at 2541.364 kb on - strand, within Psest_2389 at 2541.364 kb on - strand, within Psest_2389 at 2541.364 kb on - strand, within Psest_2389 at 2541.453 kb on - strand, within Psest_2389 at 2541.621 kb on + strand, within Psest_2389 at 2541.622 kb on - strand, within Psest_2389 at 2541.744 kb on + strand at 2541.838 kb on - strand at 2541.838 kb on - strand at 2541.922 kb on + strand, within Psest_2390 at 2541.922 kb on + strand, within Psest_2390 at 2541.926 kb on + strand, within Psest_2390 at 2541.927 kb on - strand, within Psest_2390 at 2541.927 kb on - strand, within Psest_2390 at 2541.927 kb on - strand, within Psest_2390 at 2541.927 kb on - strand, within Psest_2390 at 2541.927 kb on - strand, within Psest_2390 at 2541.927 kb on - strand, within Psest_2390 at 2541.927 kb on - strand, within Psest_2390 at 2541.927 kb on - strand, within Psest_2390 at 2541.927 kb on - strand, within Psest_2390 at 2542.220 kb on + strand, within Psest_2390 at 2542.221 kb on - strand, within Psest_2390 at 2542.247 kb on + strand, within Psest_2390 at 2542.247 kb on + strand, within Psest_2390 at 2542.247 kb on + strand, within Psest_2390 at 2542.248 kb on - strand, within Psest_2390 at 2542.248 kb on - strand, within Psest_2390 at 2542.248 kb on - strand, within Psest_2390 at 2542.248 kb on - strand, within Psest_2390 at 2542.248 kb on - strand, within Psest_2390 at 2542.248 kb on - strand, within Psest_2390 at 2542.398 kb on + strand at 2542.527 kb on + strand, within Psest_2391 at 2542.528 kb on - strand, within Psest_2391 at 2542.689 kb on + strand, within Psest_2391 at 2542.689 kb on + strand, within Psest_2391 at 2542.689 kb on + strand, within Psest_2391 at 2542.690 kb on - strand, within Psest_2391 at 2542.764 kb on + strand, within Psest_2391 at 2542.764 kb on + strand, within Psest_2391 at 2542.764 kb on + strand, within Psest_2391 at 2542.765 kb on - strand, within Psest_2391 at 2542.765 kb on - strand, within Psest_2391 at 2542.902 kb on + strand at 2542.903 kb on - strand at 2542.954 kb on + strand at 2542.954 kb on + strand at 2542.954 kb on + strand at 2542.955 kb on - strand at 2542.960 kb on - strand at 2542.960 kb on - strand at 2543.263 kb on + strand at 2543.293 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 2,540,925 + Psest_2389 0.27 +0.5 2,540,925 + Psest_2389 0.27 +1.5 2,540,925 + Psest_2389 0.27 -0.7 2,540,925 + Psest_2389 0.27 -0.4 2,540,925 + Psest_2389 0.27 +0.2 2,540,925 + Psest_2389 0.27 +0.9 2,540,926 - Psest_2389 0.27 +0.7 2,540,926 - Psest_2389 0.27 +0.9 2,540,926 - Psest_2389 0.27 +0.7 2,540,955 + Psest_2389 0.30 +1.3 2,540,956 - Psest_2389 0.30 -0.6 2,540,956 - Psest_2389 0.30 +0.5 2,541,085 - Psest_2389 0.40 +0.2 2,541,258 + Psest_2389 0.54 -0.3 2,541,258 + Psest_2389 0.54 +0.2 2,541,363 + Psest_2389 0.63 +0.6 2,541,363 + Psest_2389 0.63 +0.1 2,541,363 + Psest_2389 0.63 -0.7 2,541,363 + Psest_2389 0.63 -0.5 2,541,363 + Psest_2389 0.63 +0.7 2,541,364 - Psest_2389 0.63 +0.0 2,541,364 - Psest_2389 0.63 +0.0 2,541,364 - Psest_2389 0.63 +1.1 2,541,364 - Psest_2389 0.63 +0.0 2,541,364 - Psest_2389 0.63 +1.7 2,541,364 - Psest_2389 0.63 -0.1 2,541,453 - Psest_2389 0.70 +1.8 2,541,621 + Psest_2389 0.84 +0.9 2,541,622 - Psest_2389 0.84 +1.4 2,541,744 + +0.1 2,541,838 - +0.3 2,541,838 - -0.8 2,541,922 + Psest_2390 0.19 +0.7 2,541,922 + Psest_2390 0.19 +1.2 2,541,926 + Psest_2390 0.20 -1.5 2,541,927 - Psest_2390 0.20 +2.7 2,541,927 - Psest_2390 0.20 +0.9 2,541,927 - Psest_2390 0.20 +1.8 2,541,927 - Psest_2390 0.20 +0.9 2,541,927 - Psest_2390 0.20 +0.7 2,541,927 - Psest_2390 0.20 +1.2 2,541,927 - Psest_2390 0.20 +0.9 2,541,927 - Psest_2390 0.20 -0.2 2,541,927 - Psest_2390 0.20 +0.7 2,542,220 + Psest_2390 0.76 +0.9 2,542,221 - Psest_2390 0.76 -0.1 2,542,247 + Psest_2390 0.81 +0.7 2,542,247 + Psest_2390 0.81 +1.4 2,542,247 + Psest_2390 0.81 +0.5 2,542,248 - Psest_2390 0.81 -0.2 2,542,248 - Psest_2390 0.81 +0.6 2,542,248 - Psest_2390 0.81 +0.5 2,542,248 - Psest_2390 0.81 +0.3 2,542,248 - Psest_2390 0.81 +0.8 2,542,248 - Psest_2390 0.81 +0.8 2,542,398 + -1.1 2,542,527 + Psest_2391 0.21 +0.1 2,542,528 - Psest_2391 0.21 +0.1 2,542,689 + Psest_2391 0.57 +0.1 2,542,689 + Psest_2391 0.57 -0.7 2,542,689 + Psest_2391 0.57 +1.1 2,542,690 - Psest_2391 0.57 +0.6 2,542,764 + Psest_2391 0.74 +0.3 2,542,764 + Psest_2391 0.74 -0.2 2,542,764 + Psest_2391 0.74 +1.1 2,542,765 - Psest_2391 0.74 +0.8 2,542,765 - Psest_2391 0.74 +0.7 2,542,902 + -0.1 2,542,903 - +1.6 2,542,954 + +1.0 2,542,954 + +0.5 2,542,954 + +1.9 2,542,955 - +1.1 2,542,960 - +1.3 2,542,960 - +1.3 2,543,263 + +0.0 2,543,293 - -0.5
Or see this region's nucleotide sequence