Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2286 and Psest_2287 are separated by 97 nucleotides Psest_2287 and Psest_2288 are separated by 89 nucleotides Psest_2288 and Psest_2289 are separated by 177 nucleotides
Psest_2286: Psest_2286 - endopeptidase Clp ATP-binding regulatory subunit (clpX), at 2,436,295 to 2,437,575
_2286
Psest_2287: Psest_2287 - ATP-dependent Clp protease, proteolytic subunit ClpP, at 2,437,673 to 2,438,311
_2287
Psest_2288: Psest_2288 - trigger factor, at 2,438,401 to 2,439,711
_2288
Psest_2289: Psest_2289 - Nitric oxide reductase activation protein, at 2,439,889 to 2,441,910
_2289
Position (kb)
2438
2439
2440 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2438.372 kb on - strand at 2438.372 kb on - strand at 2438.488 kb on - strand at 2438.488 kb on - strand at 2438.492 kb on - strand at 2438.492 kb on - strand at 2438.492 kb on - strand at 2438.492 kb on - strand at 2438.492 kb on - strand at 2438.550 kb on - strand, within Psest_2288 at 2438.550 kb on - strand, within Psest_2288 at 2438.550 kb on - strand, within Psest_2288 at 2438.550 kb on - strand, within Psest_2288 at 2438.553 kb on - strand, within Psest_2288 at 2438.583 kb on - strand, within Psest_2288 at 2438.828 kb on - strand, within Psest_2288 at 2439.399 kb on - strand, within Psest_2288 at 2439.399 kb on - strand, within Psest_2288 at 2439.486 kb on - strand, within Psest_2288 at 2439.735 kb on + strand at 2439.735 kb on + strand at 2439.735 kb on + strand at 2439.735 kb on + strand at 2439.735 kb on + strand at 2439.735 kb on + strand at 2439.735 kb on + strand at 2439.735 kb on + strand at 2439.735 kb on + strand at 2439.735 kb on + strand at 2439.736 kb on - strand at 2439.736 kb on - strand at 2439.774 kb on - strand at 2439.790 kb on + strand at 2439.790 kb on + strand at 2439.790 kb on + strand at 2439.790 kb on + strand at 2439.790 kb on + strand at 2439.790 kb on + strand at 2439.790 kb on + strand at 2439.790 kb on + strand at 2439.791 kb on - strand at 2439.791 kb on - strand at 2439.791 kb on - strand at 2439.791 kb on - strand at 2439.791 kb on - strand at 2439.791 kb on - strand at 2439.791 kb on - strand at 2439.791 kb on - strand at 2439.890 kb on + strand at 2439.890 kb on + strand at 2439.963 kb on - strand at 2439.992 kb on + strand at 2440.033 kb on + strand at 2440.098 kb on - strand, within Psest_2289 at 2440.098 kb on - strand, within Psest_2289 at 2440.211 kb on + strand, within Psest_2289 at 2440.211 kb on + strand, within Psest_2289 at 2440.211 kb on + strand, within Psest_2289 at 2440.211 kb on + strand, within Psest_2289 at 2440.212 kb on - strand, within Psest_2289 at 2440.212 kb on - strand, within Psest_2289 at 2440.260 kb on - strand, within Psest_2289 at 2440.396 kb on + strand, within Psest_2289 at 2440.396 kb on + strand, within Psest_2289 at 2440.396 kb on + strand, within Psest_2289 at 2440.397 kb on - strand, within Psest_2289 at 2440.397 kb on - strand, within Psest_2289 at 2440.397 kb on - strand, within Psest_2289 at 2440.397 kb on - strand, within Psest_2289 at 2440.397 kb on - strand, within Psest_2289 at 2440.397 kb on - strand, within Psest_2289 at 2440.496 kb on + strand, within Psest_2289 at 2440.550 kb on + strand, within Psest_2289 at 2440.550 kb on + strand, within Psest_2289 at 2440.550 kb on + strand, within Psest_2289 at 2440.550 kb on + strand, within Psest_2289 at 2440.550 kb on + strand, within Psest_2289 at 2440.550 kb on + strand, within Psest_2289 at 2440.550 kb on + strand, within Psest_2289 at 2440.550 kb on + strand, within Psest_2289 at 2440.550 kb on + strand, within Psest_2289 at 2440.550 kb on + strand, within Psest_2289 at 2440.550 kb on + strand, within Psest_2289 at 2440.550 kb on + strand, within Psest_2289 at 2440.551 kb on - strand, within Psest_2289 at 2440.551 kb on - strand, within Psest_2289 at 2440.551 kb on - strand, within Psest_2289 at 2440.551 kb on - strand, within Psest_2289 at 2440.551 kb on - strand, within Psest_2289 at 2440.551 kb on - strand, within Psest_2289 at 2440.551 kb on - strand, within Psest_2289 at 2440.551 kb on - strand, within Psest_2289 at 2440.551 kb on - strand, within Psest_2289 at 2440.551 kb on - strand, within Psest_2289 at 2440.551 kb on - strand, within Psest_2289 at 2440.551 kb on - strand, within Psest_2289 at 2440.551 kb on - strand, within Psest_2289 at 2440.551 kb on - strand, within Psest_2289 at 2440.551 kb on - strand, within Psest_2289 at 2440.551 kb on - strand, within Psest_2289 at 2440.551 kb on - strand, within Psest_2289 at 2440.551 kb on - strand, within Psest_2289 at 2440.551 kb on - strand, within Psest_2289 at 2440.551 kb on - strand, within Psest_2289 at 2440.551 kb on - strand, within Psest_2289 at 2440.551 kb on - strand, within Psest_2289 at 2440.551 kb on - strand, within Psest_2289 at 2440.551 kb on - strand, within Psest_2289 at 2440.551 kb on - strand, within Psest_2289 at 2440.551 kb on - strand, within Psest_2289 at 2440.551 kb on - strand, within Psest_2289 at 2440.551 kb on - strand, within Psest_2289 at 2440.551 kb on - strand, within Psest_2289 at 2440.551 kb on - strand, within Psest_2289 at 2440.708 kb on + strand, within Psest_2289 at 2440.709 kb on - strand, within Psest_2289
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 2,438,372 - +1.9 2,438,372 - -0.3 2,438,488 - +0.7 2,438,488 - +0.2 2,438,492 - +0.2 2,438,492 - -0.5 2,438,492 - +0.1 2,438,492 - +0.0 2,438,492 - -0.4 2,438,550 - Psest_2288 0.11 +0.6 2,438,550 - Psest_2288 0.11 -0.4 2,438,550 - Psest_2288 0.11 +0.3 2,438,550 - Psest_2288 0.11 +0.5 2,438,553 - Psest_2288 0.12 +0.7 2,438,583 - Psest_2288 0.14 +1.0 2,438,828 - Psest_2288 0.33 +0.0 2,439,399 - Psest_2288 0.76 +0.8 2,439,399 - Psest_2288 0.76 -0.9 2,439,486 - Psest_2288 0.83 +0.9 2,439,735 + +0.3 2,439,735 + +0.3 2,439,735 + -0.7 2,439,735 + +1.3 2,439,735 + +0.1 2,439,735 + +0.7 2,439,735 + +1.2 2,439,735 + -0.3 2,439,735 + -1.9 2,439,735 + +1.0 2,439,736 - -0.3 2,439,736 - -0.0 2,439,774 - +0.5 2,439,790 + +1.6 2,439,790 + +0.9 2,439,790 + -0.5 2,439,790 + +0.3 2,439,790 + +0.5 2,439,790 + +0.1 2,439,790 + +0.9 2,439,790 + +0.6 2,439,791 - -0.6 2,439,791 - +0.5 2,439,791 - -0.4 2,439,791 - +0.6 2,439,791 - +0.6 2,439,791 - +0.6 2,439,791 - +0.7 2,439,791 - -1.0 2,439,890 + +0.5 2,439,890 + +0.2 2,439,963 - -0.3 2,439,992 + -0.6 2,440,033 + -0.8 2,440,098 - Psest_2289 0.10 -1.1 2,440,098 - Psest_2289 0.10 +1.5 2,440,211 + Psest_2289 0.16 -0.9 2,440,211 + Psest_2289 0.16 +0.1 2,440,211 + Psest_2289 0.16 +0.1 2,440,211 + Psest_2289 0.16 +0.0 2,440,212 - Psest_2289 0.16 -0.2 2,440,212 - Psest_2289 0.16 -0.1 2,440,260 - Psest_2289 0.18 -0.7 2,440,396 + Psest_2289 0.25 +0.1 2,440,396 + Psest_2289 0.25 -0.3 2,440,396 + Psest_2289 0.25 -0.5 2,440,397 - Psest_2289 0.25 -0.2 2,440,397 - Psest_2289 0.25 -0.1 2,440,397 - Psest_2289 0.25 -0.4 2,440,397 - Psest_2289 0.25 -1.1 2,440,397 - Psest_2289 0.25 +0.0 2,440,397 - Psest_2289 0.25 +0.4 2,440,496 + Psest_2289 0.30 +0.1 2,440,550 + Psest_2289 0.33 +0.3 2,440,550 + Psest_2289 0.33 +0.3 2,440,550 + Psest_2289 0.33 -0.1 2,440,550 + Psest_2289 0.33 +0.3 2,440,550 + Psest_2289 0.33 -0.2 2,440,550 + Psest_2289 0.33 -0.2 2,440,550 + Psest_2289 0.33 +0.9 2,440,550 + Psest_2289 0.33 -0.3 2,440,550 + Psest_2289 0.33 +0.7 2,440,550 + Psest_2289 0.33 -0.1 2,440,550 + Psest_2289 0.33 -0.3 2,440,550 + Psest_2289 0.33 -0.1 2,440,551 - Psest_2289 0.33 -0.4 2,440,551 - Psest_2289 0.33 -0.1 2,440,551 - Psest_2289 0.33 -1.9 2,440,551 - Psest_2289 0.33 -0.6 2,440,551 - Psest_2289 0.33 -0.6 2,440,551 - Psest_2289 0.33 -0.2 2,440,551 - Psest_2289 0.33 +1.3 2,440,551 - Psest_2289 0.33 -0.9 2,440,551 - Psest_2289 0.33 -0.0 2,440,551 - Psest_2289 0.33 +0.4 2,440,551 - Psest_2289 0.33 +0.3 2,440,551 - Psest_2289 0.33 +0.1 2,440,551 - Psest_2289 0.33 +0.1 2,440,551 - Psest_2289 0.33 +0.4 2,440,551 - Psest_2289 0.33 +0.5 2,440,551 - Psest_2289 0.33 -0.5 2,440,551 - Psest_2289 0.33 +0.6 2,440,551 - Psest_2289 0.33 -0.3 2,440,551 - Psest_2289 0.33 +0.3 2,440,551 - Psest_2289 0.33 +0.2 2,440,551 - Psest_2289 0.33 +0.2 2,440,551 - Psest_2289 0.33 -0.5 2,440,551 - Psest_2289 0.33 -0.6 2,440,551 - Psest_2289 0.33 +0.0 2,440,551 - Psest_2289 0.33 -0.3 2,440,551 - Psest_2289 0.33 +0.2 2,440,551 - Psest_2289 0.33 -0.4 2,440,551 - Psest_2289 0.33 +0.6 2,440,551 - Psest_2289 0.33 +0.6 2,440,551 - Psest_2289 0.33 -0.2 2,440,708 + Psest_2289 0.41 -0.9 2,440,709 - Psest_2289 0.41 +1.1
Or see this region's nucleotide sequence