Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2119 and Psest_2120 are separated by 121 nucleotides Psest_2120 and Psest_2121 are separated by 51 nucleotides
Psest_2119: Psest_2119 - Glycine/D-amino acid oxidases (deaminating), at 2,250,175 to 2,251,419
_2119
Psest_2120: Psest_2120 - Transcriptional regulator, at 2,251,541 to 2,252,449
_2120
Psest_2121: Psest_2121 - Predicted ATPase, at 2,252,501 to 2,253,610
_2121
Position (kb)
2251
2252
2253 Strain fitness (log2 ratio)
-1
0
1
2 at 2250.612 kb on - strand, within Psest_2119 at 2250.854 kb on + strand, within Psest_2119 at 2250.854 kb on + strand, within Psest_2119 at 2250.854 kb on + strand, within Psest_2119 at 2250.854 kb on + strand, within Psest_2119 at 2250.854 kb on + strand, within Psest_2119 at 2250.992 kb on + strand, within Psest_2119 at 2250.992 kb on + strand, within Psest_2119 at 2250.993 kb on - strand, within Psest_2119 at 2251.268 kb on + strand, within Psest_2119 at 2251.371 kb on - strand at 2251.452 kb on + strand at 2251.452 kb on + strand at 2251.453 kb on - strand at 2251.555 kb on + strand at 2251.618 kb on + strand at 2251.618 kb on + strand at 2251.618 kb on + strand at 2251.618 kb on + strand at 2251.619 kb on - strand at 2251.619 kb on - strand at 2251.619 kb on - strand at 2251.897 kb on + strand, within Psest_2120 at 2251.898 kb on - strand, within Psest_2120 at 2251.898 kb on - strand, within Psest_2120 at 2252.201 kb on - strand, within Psest_2120 at 2252.216 kb on + strand, within Psest_2120 at 2252.217 kb on - strand, within Psest_2120 at 2252.648 kb on + strand at 2252.648 kb on + strand, within Psest_2121 at 2252.649 kb on - strand, within Psest_2121 at 2252.649 kb on - strand, within Psest_2121 at 2252.820 kb on + strand, within Psest_2121 at 2252.820 kb on + strand, within Psest_2121 at 2252.820 kb on + strand, within Psest_2121 at 2252.820 kb on + strand, within Psest_2121 at 2252.820 kb on + strand, within Psest_2121 at 2252.820 kb on + strand, within Psest_2121
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 2,250,612 - Psest_2119 0.35 +0.1 2,250,854 + Psest_2119 0.55 +0.1 2,250,854 + Psest_2119 0.55 -0.7 2,250,854 + Psest_2119 0.55 -0.2 2,250,854 + Psest_2119 0.55 -0.3 2,250,854 + Psest_2119 0.55 +0.4 2,250,992 + Psest_2119 0.66 +0.2 2,250,992 + Psest_2119 0.66 -0.7 2,250,993 - Psest_2119 0.66 +0.6 2,251,268 + Psest_2119 0.88 -0.7 2,251,371 - +0.6 2,251,452 + +1.3 2,251,452 + +1.7 2,251,453 - +0.9 2,251,555 + +0.1 2,251,618 + +1.3 2,251,618 + +0.7 2,251,618 + -0.2 2,251,618 + -0.1 2,251,619 - +0.8 2,251,619 - -0.1 2,251,619 - +0.2 2,251,897 + Psest_2120 0.39 +0.4 2,251,898 - Psest_2120 0.39 +0.4 2,251,898 - Psest_2120 0.39 +1.1 2,252,201 - Psest_2120 0.73 -0.1 2,252,216 + Psest_2120 0.74 +0.9 2,252,217 - Psest_2120 0.74 +0.9 2,252,648 + +0.9 2,252,648 + Psest_2121 0.13 +0.5 2,252,649 - Psest_2121 0.13 +1.9 2,252,649 - Psest_2121 0.13 -1.0 2,252,820 + Psest_2121 0.29 +1.1 2,252,820 + Psest_2121 0.29 -0.7 2,252,820 + Psest_2121 0.29 +0.1 2,252,820 + Psest_2121 0.29 -1.1 2,252,820 + Psest_2121 0.29 +1.1 2,252,820 + Psest_2121 0.29 +1.5
Or see this region's nucleotide sequence