Experiment: m.b. Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1634 and HP15_1635 are separated by 313 nucleotides HP15_1635 and HP15_1636 are separated by 79 nucleotides
HP15_1634: HP15_1634 - branched-chain alpha-keto acid dehydrogenase complex E1 alpha subunit, at 1,733,306 to 1,734,454
_1634
HP15_1635: HP15_1635 - malate:quinone oxidoreductase, at 1,734,768 to 1,736,204
_1635
HP15_1636: HP15_1636 - NADP-dependent isocitrate dehydrogenase-like protein, at 1,736,284 to 1,738,002
_1636
Position (kb)
1734
1735
1736
1737 Strain fitness (log2 ratio)
-1
0
1
2 at 1733.785 kb on - strand, within HP15_1634 at 1733.797 kb on + strand, within HP15_1634 at 1733.797 kb on + strand, within HP15_1634 at 1733.900 kb on + strand, within HP15_1634 at 1733.900 kb on + strand, within HP15_1634 at 1733.900 kb on + strand, within HP15_1634 at 1733.908 kb on - strand, within HP15_1634 at 1733.908 kb on - strand, within HP15_1634 at 1733.908 kb on - strand, within HP15_1634 at 1733.908 kb on - strand, within HP15_1634 at 1734.187 kb on - strand, within HP15_1634 at 1734.254 kb on - strand, within HP15_1634 at 1734.275 kb on + strand, within HP15_1634 at 1734.359 kb on + strand at 1734.389 kb on - strand at 1734.770 kb on - strand at 1734.816 kb on - strand at 1734.882 kb on - strand at 1734.941 kb on + strand, within HP15_1635 at 1735.022 kb on + strand, within HP15_1635 at 1735.022 kb on + strand, within HP15_1635 at 1735.030 kb on - strand, within HP15_1635 at 1735.030 kb on - strand, within HP15_1635 at 1735.222 kb on + strand, within HP15_1635 at 1735.410 kb on + strand, within HP15_1635 at 1735.581 kb on + strand, within HP15_1635 at 1735.581 kb on + strand, within HP15_1635 at 1735.581 kb on + strand, within HP15_1635 at 1735.581 kb on + strand, within HP15_1635 at 1735.589 kb on - strand, within HP15_1635 at 1735.624 kb on - strand, within HP15_1635 at 1735.626 kb on + strand, within HP15_1635 at 1735.710 kb on - strand, within HP15_1635 at 1735.733 kb on - strand, within HP15_1635 at 1735.778 kb on - strand, within HP15_1635 at 1735.841 kb on - strand, within HP15_1635 at 1735.871 kb on - strand, within HP15_1635 at 1735.873 kb on + strand, within HP15_1635 at 1735.881 kb on - strand, within HP15_1635 at 1735.884 kb on + strand, within HP15_1635 at 1735.932 kb on + strand, within HP15_1635 at 1736.305 kb on - strand at 1736.514 kb on + strand, within HP15_1636 at 1736.539 kb on - strand, within HP15_1636 at 1736.591 kb on - strand, within HP15_1636 at 1736.626 kb on - strand, within HP15_1636 at 1736.657 kb on - strand, within HP15_1636 at 1736.726 kb on + strand, within HP15_1636 at 1736.734 kb on - strand, within HP15_1636 at 1736.871 kb on - strand, within HP15_1636 at 1736.937 kb on - strand, within HP15_1636 at 1737.046 kb on - strand, within HP15_1636 at 1737.089 kb on + strand, within HP15_1636 at 1737.096 kb on + strand, within HP15_1636 at 1737.104 kb on - strand, within HP15_1636 at 1737.107 kb on - strand, within HP15_1636 at 1737.119 kb on - strand, within HP15_1636 at 1737.160 kb on - strand, within HP15_1636
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.016 mg/ml remove 1,733,785 - HP15_1634 0.42 -0.2 1,733,797 + HP15_1634 0.43 +1.7 1,733,797 + HP15_1634 0.43 +0.1 1,733,900 + HP15_1634 0.52 +0.1 1,733,900 + HP15_1634 0.52 -0.8 1,733,900 + HP15_1634 0.52 +1.4 1,733,908 - HP15_1634 0.52 -0.2 1,733,908 - HP15_1634 0.52 -1.6 1,733,908 - HP15_1634 0.52 -1.3 1,733,908 - HP15_1634 0.52 -0.1 1,734,187 - HP15_1634 0.77 -1.5 1,734,254 - HP15_1634 0.83 +1.4 1,734,275 + HP15_1634 0.84 -0.6 1,734,359 + +0.5 1,734,389 - -0.1 1,734,770 - -0.2 1,734,816 - +1.4 1,734,882 - -1.7 1,734,941 + HP15_1635 0.12 -0.2 1,735,022 + HP15_1635 0.18 +0.2 1,735,022 + HP15_1635 0.18 +0.3 1,735,030 - HP15_1635 0.18 -0.2 1,735,030 - HP15_1635 0.18 +1.8 1,735,222 + HP15_1635 0.32 -0.1 1,735,410 + HP15_1635 0.45 -0.2 1,735,581 + HP15_1635 0.57 -0.6 1,735,581 + HP15_1635 0.57 -0.8 1,735,581 + HP15_1635 0.57 +1.0 1,735,581 + HP15_1635 0.57 -0.1 1,735,589 - HP15_1635 0.57 +0.3 1,735,624 - HP15_1635 0.60 +0.1 1,735,626 + HP15_1635 0.60 -0.5 1,735,710 - HP15_1635 0.66 +1.1 1,735,733 - HP15_1635 0.67 +0.4 1,735,778 - HP15_1635 0.70 +0.9 1,735,841 - HP15_1635 0.75 -1.0 1,735,871 - HP15_1635 0.77 +1.8 1,735,873 + HP15_1635 0.77 +0.3 1,735,881 - HP15_1635 0.77 +0.8 1,735,884 + HP15_1635 0.78 +1.1 1,735,932 + HP15_1635 0.81 -0.6 1,736,305 - +0.5 1,736,514 + HP15_1636 0.13 +0.2 1,736,539 - HP15_1636 0.15 -0.3 1,736,591 - HP15_1636 0.18 -0.3 1,736,626 - HP15_1636 0.20 -0.2 1,736,657 - HP15_1636 0.22 +0.4 1,736,726 + HP15_1636 0.26 -0.2 1,736,734 - HP15_1636 0.26 +0.3 1,736,871 - HP15_1636 0.34 -0.1 1,736,937 - HP15_1636 0.38 +0.6 1,737,046 - HP15_1636 0.44 +0.2 1,737,089 + HP15_1636 0.47 -0.3 1,737,096 + HP15_1636 0.47 +0.3 1,737,104 - HP15_1636 0.48 +0.1 1,737,107 - HP15_1636 0.48 -0.5 1,737,119 - HP15_1636 0.49 -0.3 1,737,160 - HP15_1636 0.51 +1.0
Or see this region's nucleotide sequence