Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1596 and Psest_1597 are separated by 29 nucleotides Psest_1597 and Psest_1598 are separated by 155 nucleotides Psest_1598 and Psest_1599 overlap by 4 nucleotides
Psest_1596: Psest_1596 - ATPase, P-type (transporting), HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase, at 1,698,981 to 1,701,500
_1596
Psest_1597: Psest_1597 - Protein of unknown function (DUF2933)., at 1,701,530 to 1,701,760
_1597
Psest_1598: Psest_1598 - heavy metal response regulator, at 1,701,916 to 1,702,599
_1598
Psest_1599: Psest_1599 - heavy metal sensor kinase, at 1,702,596 to 1,703,960
_1599
Position (kb)
1701
1702 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1700.593 kb on + strand, within Psest_1596 at 1700.783 kb on + strand, within Psest_1596 at 1700.783 kb on + strand, within Psest_1596 at 1700.784 kb on - strand, within Psest_1596 at 1700.784 kb on - strand, within Psest_1596 at 1701.282 kb on + strand at 1701.282 kb on + strand at 1701.282 kb on + strand at 1701.282 kb on + strand at 1701.282 kb on + strand at 1701.282 kb on + strand at 1701.282 kb on + strand at 1701.282 kb on + strand at 1701.283 kb on - strand at 1701.283 kb on - strand at 1701.283 kb on - strand at 1701.283 kb on - strand at 1701.283 kb on - strand at 1701.283 kb on - strand at 1701.283 kb on - strand at 1701.283 kb on - strand at 1701.283 kb on - strand at 1701.283 kb on - strand at 1701.283 kb on - strand at 1701.283 kb on - strand at 1701.283 kb on - strand at 1701.283 kb on - strand at 1701.340 kb on - strand at 1701.663 kb on + strand, within Psest_1597 at 1701.663 kb on + strand, within Psest_1597 at 1701.663 kb on + strand, within Psest_1597 at 1701.663 kb on + strand, within Psest_1597 at 1701.664 kb on - strand, within Psest_1597 at 1701.664 kb on - strand, within Psest_1597 at 1701.796 kb on + strand at 1701.797 kb on - strand at 1701.806 kb on - strand at 1701.842 kb on + strand at 1701.843 kb on - strand at 1701.843 kb on - strand at 1701.870 kb on + strand at 1701.958 kb on + strand at 1701.959 kb on - strand at 1701.959 kb on - strand at 1701.959 kb on - strand at 1702.048 kb on + strand, within Psest_1598 at 1702.207 kb on + strand, within Psest_1598 at 1702.207 kb on + strand, within Psest_1598 at 1702.208 kb on - strand, within Psest_1598 at 1702.255 kb on - strand, within Psest_1598 at 1702.359 kb on + strand, within Psest_1598 at 1702.360 kb on - strand, within Psest_1598 at 1702.570 kb on + strand at 1702.570 kb on + strand at 1702.570 kb on + strand at 1702.571 kb on - strand at 1702.571 kb on - strand at 1702.724 kb on + strand at 1702.725 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 1,700,593 + Psest_1596 0.64 +0.2 1,700,783 + Psest_1596 0.72 -0.8 1,700,783 + Psest_1596 0.72 -0.0 1,700,784 - Psest_1596 0.72 +0.5 1,700,784 - Psest_1596 0.72 -0.3 1,701,282 + +0.2 1,701,282 + +2.0 1,701,282 + +0.8 1,701,282 + -0.2 1,701,282 + +0.7 1,701,282 + +0.5 1,701,282 + +0.5 1,701,282 + -0.4 1,701,283 - +0.2 1,701,283 - +0.4 1,701,283 - +0.1 1,701,283 - -0.3 1,701,283 - +1.0 1,701,283 - +2.0 1,701,283 - +0.8 1,701,283 - +1.5 1,701,283 - -0.8 1,701,283 - +0.5 1,701,283 - +0.1 1,701,283 - +0.4 1,701,283 - +0.1 1,701,283 - +1.2 1,701,340 - -0.6 1,701,663 + Psest_1597 0.58 +0.4 1,701,663 + Psest_1597 0.58 +0.5 1,701,663 + Psest_1597 0.58 +0.5 1,701,663 + Psest_1597 0.58 +0.1 1,701,664 - Psest_1597 0.58 +0.7 1,701,664 - Psest_1597 0.58 +0.8 1,701,796 + -0.5 1,701,797 - +0.4 1,701,806 - +0.5 1,701,842 + +1.4 1,701,843 - +0.4 1,701,843 - +0.6 1,701,870 + +0.4 1,701,958 + -0.6 1,701,959 - +0.5 1,701,959 - -0.7 1,701,959 - -0.0 1,702,048 + Psest_1598 0.19 -0.7 1,702,207 + Psest_1598 0.43 +1.0 1,702,207 + Psest_1598 0.43 +0.3 1,702,208 - Psest_1598 0.43 -0.4 1,702,255 - Psest_1598 0.50 +0.2 1,702,359 + Psest_1598 0.65 -0.1 1,702,360 - Psest_1598 0.65 -0.2 1,702,570 + -1.0 1,702,570 + -0.5 1,702,570 + +0.3 1,702,571 - +1.1 1,702,571 - -2.3 1,702,724 + +0.4 1,702,725 - -0.5
Or see this region's nucleotide sequence