Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1577

Experiment: L-Glutamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPsest_1576 and Psest_1577 are separated by 10 nucleotidesPsest_1577 and Psest_1578 are separated by 45 nucleotidesPsest_1578 and Psest_1579 are separated by 241 nucleotides Psest_1576: Psest_1576 - Periplasmic glucans biosynthesis protein, at 1,679,726 to 1,681,297 _1576 Psest_1577: Psest_1577 - Membrane glycosyltransferase, at 1,681,308 to 1,683,866 _1577 Psest_1578: Psest_1578 - FKBP-type peptidyl-prolyl cis-trans isomerases 1, at 1,683,912 to 1,684,253 _1578 Psest_1579: Psest_1579 - Pirin-related protein, at 1,684,495 to 1,685,193 _1579 Position (kb) 1681 1682 1683 1684Strain fitness (log2 ratio) -2 -1 0 1 2at 1680.377 kb on + strand, within Psest_1576at 1680.377 kb on + strand, within Psest_1576at 1680.377 kb on + strand, within Psest_1576at 1680.377 kb on + strand, within Psest_1576at 1680.377 kb on + strand, within Psest_1576at 1680.470 kb on + strand, within Psest_1576at 1680.470 kb on + strand, within Psest_1576at 1680.470 kb on + strand, within Psest_1576at 1680.470 kb on + strand, within Psest_1576at 1680.470 kb on + strand, within Psest_1576at 1680.470 kb on + strand, within Psest_1576at 1680.470 kb on + strand, within Psest_1576at 1680.470 kb on + strand, within Psest_1576at 1680.804 kb on + strand, within Psest_1576at 1680.805 kb on - strand, within Psest_1576at 1680.847 kb on + strand, within Psest_1576at 1680.848 kb on - strand, within Psest_1576at 1680.909 kb on - strand, within Psest_1576at 1681.151 kb on + strandat 1681.152 kb on - strandat 1681.411 kb on + strandat 1681.557 kb on + strandat 1681.557 kb on + strandat 1681.807 kb on - strand, within Psest_1577at 1681.842 kb on + strand, within Psest_1577at 1681.842 kb on + strand, within Psest_1577at 1681.842 kb on + strand, within Psest_1577at 1681.842 kb on + strand, within Psest_1577at 1681.842 kb on + strand, within Psest_1577at 1681.842 kb on + strand, within Psest_1577at 1681.842 kb on + strand, within Psest_1577at 1681.843 kb on - strand, within Psest_1577at 1681.843 kb on - strand, within Psest_1577at 1681.843 kb on - strand, within Psest_1577at 1681.843 kb on - strand, within Psest_1577at 1681.843 kb on - strand, within Psest_1577at 1681.843 kb on - strand, within Psest_1577at 1681.884 kb on + strand, within Psest_1577at 1681.884 kb on + strand, within Psest_1577at 1681.884 kb on + strand, within Psest_1577at 1681.943 kb on - strand, within Psest_1577at 1682.118 kb on + strand, within Psest_1577at 1682.337 kb on + strand, within Psest_1577at 1682.337 kb on + strand, within Psest_1577at 1682.337 kb on + strand, within Psest_1577at 1682.343 kb on + strand, within Psest_1577at 1682.343 kb on + strand, within Psest_1577at 1682.343 kb on + strand, within Psest_1577at 1682.476 kb on - strand, within Psest_1577at 1682.739 kb on + strand, within Psest_1577at 1682.739 kb on + strand, within Psest_1577at 1682.740 kb on - strand, within Psest_1577at 1682.740 kb on - strand, within Psest_1577at 1682.740 kb on - strand, within Psest_1577at 1682.740 kb on - strand, within Psest_1577at 1682.740 kb on - strand, within Psest_1577at 1682.740 kb on - strand, within Psest_1577at 1682.843 kb on + strand, within Psest_1577at 1682.843 kb on + strand, within Psest_1577at 1682.844 kb on - strand, within Psest_1577at 1682.884 kb on - strand, within Psest_1577at 1682.884 kb on - strand, within Psest_1577at 1682.945 kb on + strand, within Psest_1577at 1683.111 kb on + strand, within Psest_1577at 1683.111 kb on + strand, within Psest_1577at 1683.191 kb on - strand, within Psest_1577at 1683.191 kb on - strand, within Psest_1577at 1683.191 kb on - strand, within Psest_1577at 1683.197 kb on + strand, within Psest_1577at 1683.523 kb on - strand, within Psest_1577at 1683.588 kb on + strand, within Psest_1577at 1683.589 kb on - strand, within Psest_1577at 1683.589 kb on - strand, within Psest_1577at 1683.589 kb on - strand, within Psest_1577at 1683.589 kb on - strand, within Psest_1577at 1683.655 kb on + strandat 1683.656 kb on - strandat 1683.656 kb on - strandat 1683.656 kb on - strandat 1683.769 kb on - strandat 1683.769 kb on - strandat 1684.267 kb on + strandat 1684.371 kb on - strandat 1684.394 kb on - strandat 1684.513 kb on + strandat 1684.513 kb on + strandat 1684.513 kb on + strandat 1684.514 kb on - strandat 1684.514 kb on - strandat 1684.596 kb on + strand, within Psest_1579at 1684.596 kb on + strand, within Psest_1579at 1684.693 kb on + strand, within Psest_1579at 1684.693 kb on + strand, within Psest_1579at 1684.693 kb on + strand, within Psest_1579at 1684.693 kb on + strand, within Psest_1579at 1684.693 kb on + strand, within Psest_1579at 1684.693 kb on + strand, within Psest_1579at 1684.693 kb on + strand, within Psest_1579at 1684.693 kb on + strand, within Psest_1579at 1684.693 kb on + strand, within Psest_1579at 1684.693 kb on + strand, within Psest_1579at 1684.693 kb on + strand, within Psest_1579at 1684.693 kb on + strand, within Psest_1579at 1684.694 kb on - strand, within Psest_1579at 1684.694 kb on - strand, within Psest_1579at 1684.694 kb on - strand, within Psest_1579at 1684.694 kb on - strand, within Psest_1579at 1684.694 kb on - strand, within Psest_1579at 1684.694 kb on - strand, within Psest_1579at 1684.694 kb on - strand, within Psest_1579at 1684.694 kb on - strand, within Psest_1579at 1684.694 kb on - strand, within Psest_1579at 1684.694 kb on - strand, within Psest_1579at 1684.694 kb on - strand, within Psest_1579at 1684.694 kb on - strand, within Psest_1579at 1684.804 kb on + strand, within Psest_1579

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (N)
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1,680,377 + Psest_1576 0.41 +0.7
1,680,377 + Psest_1576 0.41 +0.2
1,680,377 + Psest_1576 0.41 +0.2
1,680,377 + Psest_1576 0.41 +0.0
1,680,377 + Psest_1576 0.41 +0.5
1,680,470 + Psest_1576 0.47 +0.5
1,680,470 + Psest_1576 0.47 +1.2
1,680,470 + Psest_1576 0.47 +0.5
1,680,470 + Psest_1576 0.47 -1.4
1,680,470 + Psest_1576 0.47 +0.1
1,680,470 + Psest_1576 0.47 -0.4
1,680,470 + Psest_1576 0.47 +1.3
1,680,470 + Psest_1576 0.47 +1.4
1,680,804 + Psest_1576 0.69 -1.6
1,680,805 - Psest_1576 0.69 +0.4
1,680,847 + Psest_1576 0.71 -0.2
1,680,848 - Psest_1576 0.71 +0.8
1,680,909 - Psest_1576 0.75 +0.5
1,681,151 + +2.2
1,681,152 - -1.5
1,681,411 + +0.5
1,681,557 + +0.1
1,681,557 + +0.7
1,681,807 - Psest_1577 0.19 +1.0
1,681,842 + Psest_1577 0.21 +1.0
1,681,842 + Psest_1577 0.21 -0.4
1,681,842 + Psest_1577 0.21 +2.5
1,681,842 + Psest_1577 0.21 +0.0
1,681,842 + Psest_1577 0.21 +0.8
1,681,842 + Psest_1577 0.21 -1.0
1,681,842 + Psest_1577 0.21 +2.1
1,681,843 - Psest_1577 0.21 +1.5
1,681,843 - Psest_1577 0.21 -0.0
1,681,843 - Psest_1577 0.21 -0.4
1,681,843 - Psest_1577 0.21 +2.0
1,681,843 - Psest_1577 0.21 -0.1
1,681,843 - Psest_1577 0.21 +0.6
1,681,884 + Psest_1577 0.23 -0.7
1,681,884 + Psest_1577 0.23 +1.2
1,681,884 + Psest_1577 0.23 +0.5
1,681,943 - Psest_1577 0.25 +1.1
1,682,118 + Psest_1577 0.32 -0.9
1,682,337 + Psest_1577 0.40 +0.4
1,682,337 + Psest_1577 0.40 -0.4
1,682,337 + Psest_1577 0.40 +0.4
1,682,343 + Psest_1577 0.40 +0.5
1,682,343 + Psest_1577 0.40 +0.7
1,682,343 + Psest_1577 0.40 +1.0
1,682,476 - Psest_1577 0.46 +0.1
1,682,739 + Psest_1577 0.56 +0.5
1,682,739 + Psest_1577 0.56 +1.3
1,682,740 - Psest_1577 0.56 +1.8
1,682,740 - Psest_1577 0.56 +0.3
1,682,740 - Psest_1577 0.56 +0.3
1,682,740 - Psest_1577 0.56 +0.7
1,682,740 - Psest_1577 0.56 -0.0
1,682,740 - Psest_1577 0.56 +0.3
1,682,843 + Psest_1577 0.60 +0.8
1,682,843 + Psest_1577 0.60 +0.1
1,682,844 - Psest_1577 0.60 +0.4
1,682,884 - Psest_1577 0.62 +0.6
1,682,884 - Psest_1577 0.62 +0.5
1,682,945 + Psest_1577 0.64 -0.1
1,683,111 + Psest_1577 0.70 +1.8
1,683,111 + Psest_1577 0.70 +0.5
1,683,191 - Psest_1577 0.74 -0.0
1,683,191 - Psest_1577 0.74 +1.0
1,683,191 - Psest_1577 0.74 +2.0
1,683,197 + Psest_1577 0.74 -0.9
1,683,523 - Psest_1577 0.87 -0.2
1,683,588 + Psest_1577 0.89 +0.7
1,683,589 - Psest_1577 0.89 +0.1
1,683,589 - Psest_1577 0.89 +2.3
1,683,589 - Psest_1577 0.89 +0.6
1,683,589 - Psest_1577 0.89 +1.3
1,683,655 + +1.5
1,683,656 - -0.6
1,683,656 - +0.4
1,683,656 - -0.6
1,683,769 - -0.6
1,683,769 - -0.1
1,684,267 + +0.3
1,684,371 - -0.8
1,684,394 - +0.9
1,684,513 + +1.0
1,684,513 + +0.6
1,684,513 + -0.7
1,684,514 - +0.6
1,684,514 - -0.5
1,684,596 + Psest_1579 0.14 -2.2
1,684,596 + Psest_1579 0.14 +0.2
1,684,693 + Psest_1579 0.28 -0.2
1,684,693 + Psest_1579 0.28 -0.7
1,684,693 + Psest_1579 0.28 +0.9
1,684,693 + Psest_1579 0.28 -0.5
1,684,693 + Psest_1579 0.28 +0.4
1,684,693 + Psest_1579 0.28 +0.2
1,684,693 + Psest_1579 0.28 +0.4
1,684,693 + Psest_1579 0.28 -0.1
1,684,693 + Psest_1579 0.28 +0.1
1,684,693 + Psest_1579 0.28 +0.6
1,684,693 + Psest_1579 0.28 -0.0
1,684,693 + Psest_1579 0.28 +0.3
1,684,694 - Psest_1579 0.28 -0.6
1,684,694 - Psest_1579 0.28 +0.9
1,684,694 - Psest_1579 0.28 -1.6
1,684,694 - Psest_1579 0.28 -0.2
1,684,694 - Psest_1579 0.28 +0.5
1,684,694 - Psest_1579 0.28 +0.0
1,684,694 - Psest_1579 0.28 +0.6
1,684,694 - Psest_1579 0.28 -0.3
1,684,694 - Psest_1579 0.28 -0.3
1,684,694 - Psest_1579 0.28 -0.2
1,684,694 - Psest_1579 0.28 -0.4
1,684,694 - Psest_1579 0.28 -0.4
1,684,804 + Psest_1579 0.44 -0.4

Or see this region's nucleotide sequence