Strain Fitness in Marinobacter adhaerens HP15 around HP15_1479

Experiment: m.b. Thallium(I) acetate 0.016 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1478 and HP15_1479 are separated by 14 nucleotidesHP15_1479 and HP15_1480 are separated by 29 nucleotidesHP15_1480 and HP15_1481 are separated by 95 nucleotides HP15_1478: HP15_1478 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase, at 1,554,087 to 1,555,190 _1478 HP15_1479: HP15_1479 - queuine tRNA-ribosyltransferase, at 1,555,205 to 1,556,326 _1479 HP15_1480: HP15_1480 - preprotein translocase, YajC subunit, at 1,556,356 to 1,556,718 _1480 HP15_1481: HP15_1481 - preprotein translocase subunit SecD, at 1,556,814 to 1,558,688 _1481 Position (kb) 1555 1556 1557Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 1554.223 kb on + strand, within HP15_1478at 1554.272 kb on + strand, within HP15_1478at 1554.458 kb on + strand, within HP15_1478at 1554.483 kb on - strand, within HP15_1478at 1554.498 kb on - strand, within HP15_1478at 1554.578 kb on - strand, within HP15_1478at 1554.768 kb on - strand, within HP15_1478at 1555.282 kb on - strandat 1555.282 kb on - strandat 1555.305 kb on + strandat 1555.315 kb on + strandat 1555.385 kb on - strand, within HP15_1479at 1555.385 kb on - strand, within HP15_1479at 1555.401 kb on + strand, within HP15_1479at 1555.409 kb on - strand, within HP15_1479at 1555.455 kb on + strand, within HP15_1479at 1555.455 kb on + strand, within HP15_1479at 1555.455 kb on + strand, within HP15_1479at 1555.460 kb on + strand, within HP15_1479at 1555.463 kb on - strand, within HP15_1479at 1555.463 kb on - strand, within HP15_1479at 1555.463 kb on - strand, within HP15_1479at 1555.463 kb on - strand, within HP15_1479at 1555.931 kb on + strand, within HP15_1479at 1556.000 kb on - strand, within HP15_1479at 1556.071 kb on - strand, within HP15_1479at 1556.278 kb on + strandat 1556.278 kb on + strandat 1556.556 kb on + strand, within HP15_1480

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.016 mg/ml
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1,554,223 + HP15_1478 0.12 -2.1
1,554,272 + HP15_1478 0.17 +0.1
1,554,458 + HP15_1478 0.34 -0.3
1,554,483 - HP15_1478 0.36 -2.7
1,554,498 - HP15_1478 0.37 -0.8
1,554,578 - HP15_1478 0.44 -4.3
1,554,768 - HP15_1478 0.62 -3.5
1,555,282 - -2.5
1,555,282 - -1.1
1,555,305 + -3.1
1,555,315 + -0.5
1,555,385 - HP15_1479 0.16 -3.2
1,555,385 - HP15_1479 0.16 -1.9
1,555,401 + HP15_1479 0.17 -1.1
1,555,409 - HP15_1479 0.18 -0.6
1,555,455 + HP15_1479 0.22 -2.2
1,555,455 + HP15_1479 0.22 -2.8
1,555,455 + HP15_1479 0.22 -3.2
1,555,460 + HP15_1479 0.23 -0.5
1,555,463 - HP15_1479 0.23 -2.7
1,555,463 - HP15_1479 0.23 -4.1
1,555,463 - HP15_1479 0.23 -1.9
1,555,463 - HP15_1479 0.23 -3.3
1,555,931 + HP15_1479 0.65 -2.8
1,556,000 - HP15_1479 0.71 -2.0
1,556,071 - HP15_1479 0.77 -1.4
1,556,278 + -0.3
1,556,278 + -0.2
1,556,556 + HP15_1480 0.55 +0.9

Or see this region's nucleotide sequence