Strain Fitness in Marinobacter adhaerens HP15 around HP15_1479
Experiment: m.b. Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Thallium(I) acetate 0.016 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,554,223 | + | HP15_1478 | 0.12 | -2.1 | |
1,554,272 | + | HP15_1478 | 0.17 | +0.1 | |
1,554,458 | + | HP15_1478 | 0.34 | -0.3 | |
1,554,483 | - | HP15_1478 | 0.36 | -2.7 | |
1,554,498 | - | HP15_1478 | 0.37 | -0.8 | |
1,554,578 | - | HP15_1478 | 0.44 | -4.3 | |
1,554,768 | - | HP15_1478 | 0.62 | -3.5 | |
1,555,282 | - | -2.5 | |||
1,555,282 | - | -1.1 | |||
1,555,305 | + | -3.1 | |||
1,555,315 | + | -0.5 | |||
1,555,385 | - | HP15_1479 | 0.16 | -3.2 | |
1,555,385 | - | HP15_1479 | 0.16 | -1.9 | |
1,555,401 | + | HP15_1479 | 0.17 | -1.1 | |
1,555,409 | - | HP15_1479 | 0.18 | -0.6 | |
1,555,455 | + | HP15_1479 | 0.22 | -2.2 | |
1,555,455 | + | HP15_1479 | 0.22 | -2.8 | |
1,555,455 | + | HP15_1479 | 0.22 | -3.2 | |
1,555,460 | + | HP15_1479 | 0.23 | -0.5 | |
1,555,463 | - | HP15_1479 | 0.23 | -2.7 | |
1,555,463 | - | HP15_1479 | 0.23 | -4.1 | |
1,555,463 | - | HP15_1479 | 0.23 | -1.9 | |
1,555,463 | - | HP15_1479 | 0.23 | -3.3 | |
1,555,931 | + | HP15_1479 | 0.65 | -2.8 | |
1,556,000 | - | HP15_1479 | 0.71 | -2.0 | |
1,556,071 | - | HP15_1479 | 0.77 | -1.4 | |
1,556,278 | + | -0.3 | |||
1,556,278 | + | -0.2 | |||
1,556,556 | + | HP15_1480 | 0.55 | +0.9 |
Or see this region's nucleotide sequence