Strain Fitness in Marinobacter adhaerens HP15 around HP15_1267

Experiment: m.b. Thallium(I) acetate 0.016 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1265 and HP15_1266 are separated by 57 nucleotidesHP15_1266 and HP15_1267 are separated by 43 nucleotidesHP15_1267 and HP15_1268 are separated by 68 nucleotidesHP15_1268 and HP15_1269 are separated by 90 nucleotides HP15_1265: HP15_1265 - conserved hypothetical protein, membrane, at 1,325,240 to 1,325,611 _1265 HP15_1266: HP15_1266 - flavodoxin/nitric oxide synthase, at 1,325,669 to 1,326,274 _1266 HP15_1267: HP15_1267 - arsenate reductase, at 1,326,318 to 1,326,671 _1267 HP15_1268: HP15_1268 - thioredoxin, at 1,326,740 to 1,327,207 _1268 HP15_1269: HP15_1269 - DNA polymerase III, alpha subunit, at 1,327,298 to 1,330,735 _1269 Position (kb) 1326 1327Strain fitness (log2 ratio) -1 0 1 2at 1325.320 kb on - strand, within HP15_1265at 1325.335 kb on + strand, within HP15_1265at 1325.453 kb on + strand, within HP15_1265at 1325.491 kb on - strand, within HP15_1265at 1325.502 kb on + strand, within HP15_1265at 1325.537 kb on - strand, within HP15_1265at 1325.611 kb on - strandat 1325.633 kb on + strandat 1325.641 kb on - strandat 1325.696 kb on + strandat 1325.725 kb on + strandat 1325.776 kb on + strand, within HP15_1266at 1325.783 kb on + strand, within HP15_1266at 1325.783 kb on + strand, within HP15_1266at 1325.824 kb on + strand, within HP15_1266at 1325.836 kb on + strand, within HP15_1266at 1325.859 kb on - strand, within HP15_1266at 1325.975 kb on - strand, within HP15_1266at 1326.219 kb on - strandat 1326.231 kb on - strandat 1326.323 kb on - strandat 1326.443 kb on + strand, within HP15_1267at 1326.448 kb on + strand, within HP15_1267at 1326.451 kb on - strand, within HP15_1267at 1326.451 kb on - strand, within HP15_1267at 1326.453 kb on + strand, within HP15_1267at 1326.462 kb on - strand, within HP15_1267at 1326.532 kb on + strand, within HP15_1267at 1326.742 kb on + strandat 1326.758 kb on + strandat 1326.776 kb on - strandat 1326.972 kb on + strand, within HP15_1268at 1327.049 kb on + strand, within HP15_1268at 1327.071 kb on + strand, within HP15_1268

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.016 mg/ml
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1,325,320 - HP15_1265 0.22 +0.1
1,325,335 + HP15_1265 0.26 +1.1
1,325,453 + HP15_1265 0.57 +0.3
1,325,491 - HP15_1265 0.67 +0.6
1,325,502 + HP15_1265 0.70 +1.3
1,325,537 - HP15_1265 0.80 +0.5
1,325,611 - -0.3
1,325,633 + -0.2
1,325,641 - -0.2
1,325,696 + +0.0
1,325,725 + +1.1
1,325,776 + HP15_1266 0.18 -0.1
1,325,783 + HP15_1266 0.19 +0.0
1,325,783 + HP15_1266 0.19 -0.3
1,325,824 + HP15_1266 0.26 -0.4
1,325,836 + HP15_1266 0.28 -0.6
1,325,859 - HP15_1266 0.31 -0.6
1,325,975 - HP15_1266 0.50 +0.4
1,326,219 - -0.4
1,326,231 - +0.9
1,326,323 - -1.0
1,326,443 + HP15_1267 0.35 +0.1
1,326,448 + HP15_1267 0.37 -0.3
1,326,451 - HP15_1267 0.38 -0.7
1,326,451 - HP15_1267 0.38 +0.6
1,326,453 + HP15_1267 0.38 +1.4
1,326,462 - HP15_1267 0.41 -0.1
1,326,532 + HP15_1267 0.60 +0.3
1,326,742 + +0.3
1,326,758 + +0.6
1,326,776 - +1.1
1,326,972 + HP15_1268 0.50 +2.1
1,327,049 + HP15_1268 0.66 -0.0
1,327,071 + HP15_1268 0.71 -0.9

Or see this region's nucleotide sequence