Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1069 and Psest_1070 are separated by 140 nucleotides Psest_1070 and Psest_1071 are separated by 111 nucleotides Psest_1071 and Psest_1072 are separated by 76 nucleotides
Psest_1069: Psest_1069 - Protease II, at 1,156,275 to 1,158,104
_1069
Psest_1070: Psest_1070 - Predicted membrane protein, at 1,158,245 to 1,158,643
_1070
Psest_1071: Psest_1071 - Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains, at 1,158,755 to 1,160,254
_1071
Psest_1072: Psest_1072 - TRAP transporter, DctM subunit, at 1,160,331 to 1,161,701
_1072
Position (kb)
1158
1159
1160
1161 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1157.976 kb on - strand at 1158.125 kb on + strand at 1158.125 kb on + strand at 1158.126 kb on - strand at 1158.238 kb on + strand at 1158.246 kb on + strand at 1158.246 kb on + strand at 1158.246 kb on + strand at 1158.247 kb on - strand at 1158.247 kb on - strand at 1158.247 kb on - strand at 1158.247 kb on - strand at 1158.247 kb on - strand at 1158.447 kb on + strand, within Psest_1070 at 1158.447 kb on + strand, within Psest_1070 at 1158.448 kb on - strand, within Psest_1070 at 1158.493 kb on - strand, within Psest_1070 at 1158.567 kb on - strand, within Psest_1070 at 1158.694 kb on + strand at 1158.695 kb on - strand at 1158.695 kb on - strand at 1158.695 kb on - strand at 1158.695 kb on - strand at 1158.695 kb on - strand at 1158.748 kb on - strand at 1158.792 kb on + strand at 1158.793 kb on - strand at 1158.793 kb on - strand at 1158.978 kb on + strand, within Psest_1071 at 1158.978 kb on + strand, within Psest_1071 at 1158.979 kb on - strand, within Psest_1071 at 1159.040 kb on + strand, within Psest_1071 at 1159.041 kb on - strand, within Psest_1071 at 1159.041 kb on - strand, within Psest_1071 at 1159.041 kb on - strand, within Psest_1071 at 1159.272 kb on + strand, within Psest_1071 at 1159.272 kb on + strand, within Psest_1071 at 1159.275 kb on + strand, within Psest_1071 at 1159.275 kb on + strand, within Psest_1071 at 1159.275 kb on + strand, within Psest_1071 at 1159.276 kb on - strand, within Psest_1071 at 1159.276 kb on - strand, within Psest_1071 at 1159.403 kb on + strand, within Psest_1071 at 1159.767 kb on + strand, within Psest_1071 at 1159.767 kb on + strand, within Psest_1071 at 1160.085 kb on + strand, within Psest_1071 at 1160.086 kb on - strand, within Psest_1071 at 1160.086 kb on - strand, within Psest_1071 at 1160.086 kb on - strand, within Psest_1071 at 1160.086 kb on - strand, within Psest_1071 at 1160.086 kb on - strand, within Psest_1071 at 1160.345 kb on - strand at 1160.383 kb on + strand at 1160.383 kb on + strand at 1160.383 kb on + strand at 1160.422 kb on + strand at 1160.440 kb on + strand at 1160.440 kb on + strand at 1160.441 kb on - strand at 1160.485 kb on + strand, within Psest_1072 at 1160.485 kb on + strand, within Psest_1072 at 1160.485 kb on + strand, within Psest_1072 at 1160.485 kb on + strand, within Psest_1072 at 1160.485 kb on + strand, within Psest_1072 at 1160.485 kb on + strand, within Psest_1072 at 1160.485 kb on + strand, within Psest_1072 at 1160.485 kb on + strand, within Psest_1072 at 1160.485 kb on + strand, within Psest_1072 at 1160.486 kb on - strand, within Psest_1072 at 1160.486 kb on - strand, within Psest_1072 at 1160.486 kb on - strand, within Psest_1072 at 1160.486 kb on - strand, within Psest_1072 at 1160.672 kb on + strand, within Psest_1072 at 1161.073 kb on + strand, within Psest_1072 at 1161.073 kb on + strand, within Psest_1072 at 1161.073 kb on + strand, within Psest_1072 at 1161.073 kb on + strand, within Psest_1072 at 1161.074 kb on - strand, within Psest_1072 at 1161.074 kb on - strand, within Psest_1072 at 1161.074 kb on - strand, within Psest_1072 at 1161.074 kb on - strand, within Psest_1072 at 1161.082 kb on + strand, within Psest_1072 at 1161.082 kb on + strand, within Psest_1072 at 1161.082 kb on + strand, within Psest_1072 at 1161.082 kb on + strand, within Psest_1072 at 1161.082 kb on + strand, within Psest_1072 at 1161.082 kb on + strand, within Psest_1072 at 1161.082 kb on + strand, within Psest_1072 at 1161.082 kb on + strand, within Psest_1072 at 1161.082 kb on + strand, within Psest_1072 at 1161.082 kb on + strand, within Psest_1072 at 1161.082 kb on + strand, within Psest_1072 at 1161.082 kb on + strand, within Psest_1072 at 1161.083 kb on - strand, within Psest_1072 at 1161.083 kb on - strand, within Psest_1072 at 1161.083 kb on - strand, within Psest_1072 at 1161.083 kb on - strand, within Psest_1072 at 1161.083 kb on - strand, within Psest_1072 at 1161.083 kb on - strand, within Psest_1072 at 1161.083 kb on - strand, within Psest_1072 at 1161.083 kb on - strand, within Psest_1072 at 1161.083 kb on - strand, within Psest_1072 at 1161.083 kb on - strand, within Psest_1072 at 1161.083 kb on - strand, within Psest_1072 at 1161.083 kb on - strand, within Psest_1072 at 1161.083 kb on - strand, within Psest_1072 at 1161.083 kb on - strand, within Psest_1072 at 1161.083 kb on - strand, within Psest_1072 at 1161.253 kb on + strand, within Psest_1072 at 1161.254 kb on - strand, within Psest_1072
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 1,157,976 - +1.4 1,158,125 + +0.1 1,158,125 + +1.1 1,158,126 - +2.1 1,158,238 + +0.2 1,158,246 + +0.3 1,158,246 + +0.5 1,158,246 + +0.7 1,158,247 - +0.9 1,158,247 - +0.5 1,158,247 - +0.5 1,158,247 - +0.1 1,158,247 - +1.3 1,158,447 + Psest_1070 0.51 +0.8 1,158,447 + Psest_1070 0.51 +1.1 1,158,448 - Psest_1070 0.51 +0.4 1,158,493 - Psest_1070 0.62 +0.3 1,158,567 - Psest_1070 0.81 -0.9 1,158,694 + +1.4 1,158,695 - +1.3 1,158,695 - +0.1 1,158,695 - -0.9 1,158,695 - -0.9 1,158,695 - +1.1 1,158,748 - +0.8 1,158,792 + -0.5 1,158,793 - +4.1 1,158,793 - +0.1 1,158,978 + Psest_1071 0.15 -1.2 1,158,978 + Psest_1071 0.15 +0.7 1,158,979 - Psest_1071 0.15 +0.3 1,159,040 + Psest_1071 0.19 +2.4 1,159,041 - Psest_1071 0.19 -0.5 1,159,041 - Psest_1071 0.19 +1.4 1,159,041 - Psest_1071 0.19 +1.0 1,159,272 + Psest_1071 0.34 +0.7 1,159,272 + Psest_1071 0.34 +2.9 1,159,275 + Psest_1071 0.35 -0.1 1,159,275 + Psest_1071 0.35 +0.1 1,159,275 + Psest_1071 0.35 +1.1 1,159,276 - Psest_1071 0.35 +0.0 1,159,276 - Psest_1071 0.35 +0.5 1,159,403 + Psest_1071 0.43 +1.1 1,159,767 + Psest_1071 0.67 +0.1 1,159,767 + Psest_1071 0.67 +0.8 1,160,085 + Psest_1071 0.89 -0.2 1,160,086 - Psest_1071 0.89 +0.4 1,160,086 - Psest_1071 0.89 +2.0 1,160,086 - Psest_1071 0.89 -0.5 1,160,086 - Psest_1071 0.89 +0.5 1,160,086 - Psest_1071 0.89 +1.5 1,160,345 - +0.7 1,160,383 + +1.1 1,160,383 + -0.1 1,160,383 + +0.4 1,160,422 + +0.1 1,160,440 + +0.5 1,160,440 + -0.8 1,160,441 - +2.7 1,160,485 + Psest_1072 0.11 +0.2 1,160,485 + Psest_1072 0.11 +0.1 1,160,485 + Psest_1072 0.11 -1.1 1,160,485 + Psest_1072 0.11 -2.1 1,160,485 + Psest_1072 0.11 +0.4 1,160,485 + Psest_1072 0.11 +0.5 1,160,485 + Psest_1072 0.11 +0.3 1,160,485 + Psest_1072 0.11 +0.7 1,160,485 + Psest_1072 0.11 +0.4 1,160,486 - Psest_1072 0.11 -0.4 1,160,486 - Psest_1072 0.11 +0.6 1,160,486 - Psest_1072 0.11 +0.5 1,160,486 - Psest_1072 0.11 -0.7 1,160,672 + Psest_1072 0.25 -0.8 1,161,073 + Psest_1072 0.54 +0.6 1,161,073 + Psest_1072 0.54 +1.0 1,161,073 + Psest_1072 0.54 -0.1 1,161,073 + Psest_1072 0.54 -0.6 1,161,074 - Psest_1072 0.54 +0.6 1,161,074 - Psest_1072 0.54 -0.5 1,161,074 - Psest_1072 0.54 -0.1 1,161,074 - Psest_1072 0.54 -0.0 1,161,082 + Psest_1072 0.55 +0.6 1,161,082 + Psest_1072 0.55 -0.6 1,161,082 + Psest_1072 0.55 -0.3 1,161,082 + Psest_1072 0.55 -1.4 1,161,082 + Psest_1072 0.55 +0.1 1,161,082 + Psest_1072 0.55 +0.6 1,161,082 + Psest_1072 0.55 +1.3 1,161,082 + Psest_1072 0.55 -0.4 1,161,082 + Psest_1072 0.55 +1.4 1,161,082 + Psest_1072 0.55 +0.4 1,161,082 + Psest_1072 0.55 -0.6 1,161,082 + Psest_1072 0.55 +0.0 1,161,083 - Psest_1072 0.55 +0.4 1,161,083 - Psest_1072 0.55 +1.8 1,161,083 - Psest_1072 0.55 +1.1 1,161,083 - Psest_1072 0.55 +0.5 1,161,083 - Psest_1072 0.55 +0.5 1,161,083 - Psest_1072 0.55 -0.8 1,161,083 - Psest_1072 0.55 -0.1 1,161,083 - Psest_1072 0.55 -0.1 1,161,083 - Psest_1072 0.55 +1.0 1,161,083 - Psest_1072 0.55 +1.1 1,161,083 - Psest_1072 0.55 -0.1 1,161,083 - Psest_1072 0.55 +1.1 1,161,083 - Psest_1072 0.55 +0.1 1,161,083 - Psest_1072 0.55 -0.7 1,161,083 - Psest_1072 0.55 +0.1 1,161,253 + Psest_1072 0.67 -0.2 1,161,254 - Psest_1072 0.67 +0.6
Or see this region's nucleotide sequence